Charadrius vociferus (killdeer): 104292638
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Entry
104292638 CDS
T08577
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104292638 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104292638 (ABCC8)
Transporters [BR:
cvf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
104292638 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
MTABC_N
RsgA_GTPase
MMR_HSR1
AAA_25
TMD0_ABC
nSTAND1
AAA_15
TraD_N
DEAD
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
104292638
NCBI-ProteinID:
XP_009890349
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MRYVVLNTQLSNGFCGDEGNSTAYNVDHGVLNNGCFVDALTVVPHVFLLFITFPILFIGW
GSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHLHLYMPAG
MAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGFSQLRFCL
TGLLVVLYGMLLAVEINVIRVRRYVFFKTPKEVKPPEDLQDLGVRFLQPFVNLLSKGTYW
WMNTFIKTAHKKPIDLKTIGKLPIAMRALTNYIRLNEAFEAQKNKRSSSPQGSRSIWRAL
CCAFGRPLLLSSTFRILADLLGFAGPLCISGIVHNVGKGNNTIRPQTKILGVFFISSQEF
LSNAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMQLSTSNMSMGE
MTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVLLLYYLLGISALIGAAVIIVLA
PVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFHSSVEETRQKEMT
SLKSFALYTSISIFMNAAIPIAAVLITFVVHAHLTRKADFSPSVAFASISLFHILVSPLF
LLSSVVRSTVKALVSVQKLSEFLSSEEIGEEHDKSSELRSADNHSKYQAVPLKVVNRKRP
AREDWNNYSSHMRRPINITEADDFCVKITNGFFTWTPEGPPALSNIDIRIPQGQLTMIVG
QVGCGKSSLLLAILGEMQKISGNIFWSSCTSDSETGEDVSPERESPIDTEFRKRGSVAYA
SQKPWLLNATVEENITFESPFNKQRYKAVIDACSLQPDIDILPHGDQTQIGERGINLSGG
QRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDKRTVVLVTHKLQY
LPHADWIIAMKDGNIQREGTLKDIQKSETELFEHWKTLMNRQDQELEKETIIERKTVLER
TNLRRTMYSREALLKDDEEDEEEVTESDDEDNLSSVLHQRAKMPWRACGKYLSAAGILLL
PLLVLSQLLKHTVMVAIDYCLARWTSDAISGKTELELKNCSHCEDFNHSPYSKVFSILCC
LGIVLCLVTSIAVEWTGLKVTKKLHSALLNKIILAPMRFFETTPLGSILNRFSADCNTID
QHIPATLECLSRSTLLCVSALAVISYVTPMFLIALVPLAIMCYFIQKYFRVASRDLQQLD
DSTQLPLLSHFSETVEGLTTIRAFRYEAKFRQKLLEYTDSNNIASLFLTAANRWLEVRME
YIGACVVLIAAVTSITSCLYSKLSSGLVGLGLTYALMVSNYLNWMVRNLADMEIQLGAVK
RINGLLKTEAENYEGLLSSSQIPQNWPDRGEIQIQNLSVRYDSNLKPVLKHVNAHISPGQ
KIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSRLSIILQDPILFS
GTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGENFSQGQRQLFCLA
RAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILNADLVIVMK
RGVILEYDKPEVLLEQEDSVFASFVQADK
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgcggtacgttgtattaaatactcagctaagcaatggtttctgcggcgacgagggcaac
tccaccgcctacaacgtggaccacggcgtgctcaacaacggctgcttcgtggacgccctc
accgtggtgccgcacgtcttcctgctcttcatcaccttccccatcctcttcatcggatgg
ggaagtcagagttccaaagtgcatatacatcatagcacatggcttcattttcctggccac
aatttacgctggatactgacttttatcctcttgtttgtgctggtgtgtgaaattgcagag
ggcatagtgtctgatggggtttcagaatcacgccatttacacctgtacatgccagctggg
atggcattcttggcggccatcacatcggttgtctattaccataatatcgaaacatccaat
ttcccgaagttgttaattgcattgctgttctactggactttagctttcataactaaaacc
atcaaatttgtaaagttctgtgataatggggttggattttctcagcttcgattttgcctc
acaggactcctggttgttctatatggaatgctactagctgtagaaatcaatgtcatcagg
gtgaggaggtatgttttcttcaaaactcccaaagaagttaaacctcctgaggatctccag
gaccttggcgttcgattcttacagccttttgtgaatctgttgtccaaaggaacatactgg
tggatgaatacattcatcaagactgcccataaaaaaccaatagacttgaaaaccataggc
aagcttcctattgctatgagagctctgaccaattacattcgccttaatgaggcctttgaa
gcacagaagaacaaaaggtcgtcatctccacaaggatccaggtcaatttggcgtgctctc
tgctgtgcttttggaagacccttacttctcagtagcacgttccgtattctggctgacttg
cttggatttgctggtccactctgcatctctgggatcgttcacaatgtcggaaaaggaaat
aacaccatccgcccacagactaaaattcttggtgttttctttatttcatctcaagagttc
ctgtccaatgcttatgttttggctgtacttttattttttgcccttctgttgcaaaggacg
tttctccaagcatcatactatgttgctattgaaacgggaatcaacttgagaggcgcaata
cagacaaaaatatacaataaaattatgcagctttcaacctctaacatgtctatgggggag
atgactgcaggccagatctgtaacctggttgccatagacacaaatcagctgatgtggttc
tttttcctctgccctaacctttgggctatgccagtacagataattgtaggagttcttctg
ctctactaccttcttggaatcagtgccttaattggagcagctgtaatcatagtccttgca
cctgttcagtactttgtagcaacaaaactctcacaggcccagagaagcacattggagtac
tccaatgagagactgaagaagacaaatgagatgcttcgaggcattaagctccttaaactc
tatgcttgggaacacatctttcacagcagcgtagaggaaacgagacaaaaagaaatgact
agcctcaagtcttttgccctctatacctccatatccatctttatgaatgcagcaatacca
attgcagctgtacttataacatttgtggtccatgctcatctgacaagaaaggctgacttc
tccccatctgtggcatttgcctccatctccctgtttcatattcttgtgtctccattgttc
ctgctctccagtgtggttagatccactgtcaaagcattagtaagtgtgcagaaactgagt
gaattcctgtcaagtgaagaaattggagaagagcacgataaatcttcagagttaagaagt
gcagataatcacagcaaataccaggcagtgccactcaaggttgttaaccgcaagaggcct
gccagggaggactggaacaattacagctctcacatgagaagacccattaacatcacagaa
gcagatgatttttgtgtaaagatcacaaatggatttttcacttggacacctgaaggtcct
ccagcattgtccaacattgatatccgaatccctcaaggtcagctaacaatgattgtggga
caggttggctgcggtaagtcatctctcttgctagccatacttggtgagatgcagaagatc
tctgggaacatattctggagcagctgtacttctgacagtgagacgggggaagatgtcagc
ccagagagagaatctcccattgacacggaattcaggaaaagaggatcagtggcatatgca
tcacagaagccttggttgctcaatgccacagtggaagagaatatcacatttgaaagccct
ttcaacaaacagaggtacaaagcagtaattgatgcttgttccctccagcctgatattgac
attctccctcacggagaccaaacccagattggagagaggggtattaatctgtctggaggg
cagcgccaacgtatcagtgtggcaagagcactttaccagcagacaaatgttgtgttcctg
gatgatccattttctgcactggatatccacctgagtgaccatctcatgcaagaagggatc
ctgaaaatgctacgggaagacaagcggaccgttgtgctagtaactcacaagctgcagtac
ttaccccatgctgactggataattgcgatgaaagatggtaacatccagagagaaggaaca
ctcaaggacattcagaaatcagagactgagctctttgaacactggaagacgttaatgaat
cgacaagaccaagagctggagaaggagactattattgaaagaaaaactgttttggaaaga
acgaatctccggaggactatgtattcccgtgaagctctgctgaaagatgatgaagaggat
gaagaagaagtaacagaaagtgatgatgaagacaacctgtcttcagtgctgcatcagaga
gcaaagatgccatggagagcctgtggcaagtacctcagcgcggcaggaatcctccttctg
ccactgctggttctgtcccagctgctgaagcacacagtgatggtggccatcgactactgc
ctggcacgctggacctcggatgccatttctggcaagacagagctagaactgaaaaactgc
tctcactgtgaggatttcaaccattctccatattcaaaagttttcagcattctctgctgt
ctagggattgtactgtgtcttgtcacatcaatagcagtggagtggactggcttgaaagtc
accaaaaagctacactctgctttactgaataaaattattttggctccaatgaggtttttt
gaaacaacacctctgggaagtatattgaacagattttcagctgactgcaataccatcgac
cagcacattccagctaccctggagtgtttgagtcgttccactttgctgtgtgtatcagct
cttgctgtcatatcatacgtcacaccaatgtttctcattgccctggttcccctcgcaatc
atgtgttacttcatccagaagtacttccgagtcgcatcaagggacctgcagcagctggat
gatagcactcagctaccattactctcccatttttcagagactgttgaaggtcttaccacc
atccgagccttcaggtatgaagccaaatttcgacaaaaacttctggaatacacagattcc
aacaacatcgcttcccttttccttacagctgccaatcgctggctggaagtccgcatggag
tacattggagcatgtgtggtactcatagcagctgtcacttctattaccagttgcctgtat
agtaaactctcttcaggacttgtaggcttgggactaacctatgctcttatggtgtctaac
tatctgaattggatggttcgtaacctggctgacatggagatccagctgggtgcagtgaaa
agaatcaatggccttctcaaaacagaagctgaaaattacgaagggctactttcttcctca
cagattccccagaactggccagacagaggagagatccaaatccagaatctcagtgtccga
tatgacagcaacttaaagccagtgctaaagcatgtcaatgcccacatctctccaggacaa
aagattgggatctgcggccgaacaggcagtggaaaatcctccttctctcttgcatttttc
aggatggttgacacttttgagggaagaattatcattgatggtatagatatcgctaagctt
cccttacagacgttgagatccaggctgtcaatcattctccaagatcctattttattcagc
ggaacaatccggtttaacttggaccctgagaagaagtgcactgacagcatgctgtgggaa
gcactggaaatagcacagctcaagcatgtggtgaaagcgctccctgggggcctagatgct
atagtcacagaagggggagaaaactttagccagggccaaagacagctgttctgcctagca
agggcttttgtgcggaagacaagcatcttcatcatggatgaagccacagcatctattgac
atggcaacagagaacatactccagaaggtagtcatgacagcgtttgctgaccgtactgtg
gttacaatagcacaccgtgtgcacacaatcctcaatgcagacttggttattgtaatgaag
agaggggttattttggaatatgacaagcctgaggttctgctagaacaagaagacagtgtc
tttgcttcttttgtacaagcagataagtaa
DBGET
integrated database retrieval system
