KEGG   Charadrius vociferus (killdeer): 104292742
Entry
104292742         CDS       T08577                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf04382  Cornified envelope formation
cvf04510  Focal adhesion
cvf04512  ECM-receptor interaction
cvf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104292742 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104292742 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104292742 (COL4A2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104292742 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cvf04147]
    104292742 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:cvf00536]
    104292742 (COL4A2)
Exosome [BR:cvf04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104292742 (COL4A2)
Glycosaminoglycan binding proteins [BR:cvf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104292742 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104292742
NCBI-ProteinID: XP_009890460
LinkDB
Position
Unknown
AA seq 1815 aa
MHAASYVHLQLVWTPPATSSSVRQISNKLTLSEDNNQLREQVDVQWEENHWRCNNCIGLF
RQKATALKGFVAWQCFEGDATDIALAPNCSQLESSVLTPGRDGAALPPQALLETKTLQSQ
WDRPRIITEWDLGLLLILMEVVLSAVKVDAGGKTYTGPCGGRDCSGGCQCFPEKGSRGQP
GLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGISGPKGEVGHPGQPGSRGKPGHDGCN
GTVGDPGDSGSPGISGFPGTIGVQGPKGQKGEPYILPPDIASRYRGEPGDPGFNGFQGPP
GTLGIQGPVGPRGERGRPGPPGPPGPQGPQGNRGLGFYGEKGEQGPPGPPGPPGLPTREL
MGVPSDKHKGERGERGPKGEPGAPGRLVQTPEKGEEGVIGFPGQRGLPGINGFPGLSGER
GFPGFDGPPGGYGPRGSKGEPGEVGPPGPVSYFPSRIPRKGARGDPGFPGVSGLQGDPGE
EGERGLPGLPGFSDADGDKPGLPGEMGPKGEKGELGSPAYQAGPPGFPGKHGTPGLRGPP
GPAGAPGSLFGLKGQEGTPGRFGLQGFPGPRGQKGPKGEEGDCSKCLVGDELRRGSTGPP
GPPGFPGTPGQPGRKGEPGDQGPHGIPGYPGAKGFSGQDGFPGPKGQKGDSLYITTKGTK
GIRGEPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDGIRGFPGDPGYPGELGPKGFPGEAG
PPGEGFPGPKGYRGPPGDYGQDGNPGPPGLPGLPGEPGQLDCGQVTEDFSRGDGTEPIWS
GAGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPVGYPGLNGTRGDPGREGFPGPPGFT
GPRGDRGLNGLPGLQGHPGLTGKSGAPGAAGPKGFPGDVLGAAAGSRGDAGLPGFPGLKG
APGDQGVPGIRGADGNPGLPGSKGDPGPQGLPGLMGLPGTPGTRGFPGPPGNPGPDGGPG
SQGLVGPPGARGEDGEQGFPGPVGLKGLSGDKGETGYPGLQGVPGVTGPPGISGMDGFPG
DKGSRGSPGIDGFKGMTGLKGRPGIKGIKGEFGPFGAQGDKGAQGARGFKGDRGDQGPPG
EPPKIKPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGIPGKTGTPGSPGHPSYVAGVK
GDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGGRGEKGIPGISGHLGTPGSHGEIGERGDT
INLPGMPGLKGEIGVPGLTGTRGGAGQKGEGGDPGFPGIEGLKGTQGVPGSVGQEGLPGL
VGPPGQQGSPGTPGFQGQKGTPGWPGLPGQAGLPGLRGISGLHGLPGTKGLPGSPGPDGY
GSAGFPGAVGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVQGPFGIPGQEGFPGPPGISNI
SGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGQTGVSGQIGPKGSRGDPGSTGR
PGVPGYPGPKGRKGEQGVIGFMGTIGFPGDLGPIGPKGDRGVTGFQGPPGSPGLPPLPPR
LVAEQGSPGPRGNIGPQGSPGDMGPQGPPGDPGFRGSPGDPGLQGRGGIPAPPGSRGEQG
ATGFQGPVGFEGQPGRPGSPGLPGMPGRSVSMGYLLVKHSQSDQEPMCPVGMNKLWSGYS
LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMM
PVAEDDIRPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLWIGYSFLMHTAAGDEGG
GQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIDQPFQSKPSADTLKAGL
IRSHISRCQVCMKNL
NT seq 5448 nt   +upstreamnt  +downstreamnt
atgcacgcagccagctacgttcacctgcagctggtgtggacaccgcctgcaacatcttcc
tcagtccgccagatcagcaacaaactgaccttatctgaggacaacaaccagctgagggag
caggtggacgtgcaatgggaggagaaccactggagatgcaacaactgcattggattattc
agacaaaaagcaacagccctcaagggctttgtggcatggcagtgttttgaaggggatgca
acagacattgctcttgctcccaactgcagtcagctggagagttcagttttgactccaggc
agggatggagcagcgctaccacctcaggctctgctggagacaaaaactctgcagtcccag
tgggacaggccaaggatcatcacagaatgggatctggggcttctgctgatcctgatggaa
gtggtgctgtcagccgtcaaagtggatgccggtggaaagacttacacgggaccatgtgga
ggaagagactgcagtggaggatgtcagtgtttccctgaaaaaggaagccgtggccagccg
ggactccttggatcacaggggttcactggaccaccaggattgatgggaatcccaggagtg
caaggtcccaaaggtcacaaaggtgaaagaggatatccaggaataagtggacccaaagga
gaagtgggtcatccagggcagccaggatcaagggggaaaccgggtcatgatggctgtaac
gggactgtaggtgaccctggtgactcgggaagtcccggaatctctggtttccctggtacc
attggagtccaggggccaaagggccagaagggggagccctatatactgccaccggacatc
gcaagccgatacaggggggaacctggggatccagggttcaatggctttcaaggacctccg
ggtacgctgggtattcaaggacctgttggtccaagaggagagcgaggaagaccaggacca
ccagggcccccaggaccacaaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggccccccaggtcctccaggtccacctgggctccctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagaacgtggaccaaaaggggaa
cctggcgctccaggtagacttgtccaaactcctgaaaaaggtgaagaaggggtaataggc
ttccccggacaaagggggctgcctggcatcaatggttttccaggactcagtggagaaaga
ggttttccaggatttgatggtccaccaggtggctatggtcctaggggaagcaagggggag
ccaggcgaggtcggtcctccaggaccagtttcctattttccttcccgcatcccaaggaaa
ggtgcaagaggtgatccaggcttcccaggtgtttctggactacagggagacccaggagag
gagggagagcgtgggctgcctggtcttcctggattctctgatgcggatggggataaacca
ggcttacctggagaaatgggaccaaaaggtgaaaaaggtgaattaggatctcctgcttat
caggcaggcccacctgggttcccaggtaaacacggcacaccaggactccgtggtccacct
ggtcccgctggagcccctggttctctctttggattaaaaggacaggagggaacgccaggt
agatttggcttgcaaggtttccctgggccaagaggacaaaaaggacctaaaggcgaagaa
ggggattgcagtaaatgccttgtgggtgacgaactcagaaggggctctactggcccccct
ggtcctcctggctttccaggaacccctggccagcctgggaggaaaggagaacctggtgat
caaggaccgcatggtattcctggctaccctggagcaaaaggattttcaggtcaagatgga
tttcctggaccaaaaggacaaaagggagattctttatacataactactaaaggcaccaaa
ggaatccgaggagaacctgggctgcctggtatcagaggtgaagatggtttcccaggtaga
gatggattagatggcttaccaggacagcctggccttccaggtgatggtattagaggtttc
cctggcgatcctggttacccaggtgaattaggcccaaagggctttccaggagaagcaggc
ccaccgggtgaaggatttcctggtccgaaagggtaccggggtcctccaggtgactatgga
caagatggaaacccgggacctccaggtctacctggtctgcctggagagcctggccaacta
gactgtgggcaggtcactgaagacttttctagaggagatggaactgagccaatatggtca
ggcgcaggctgtgtgaggccaccaaagggatcccaaggcaagccaggactgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtgggatacccaggg
ctaaatggtacacgaggtgatccaggtcgagaaggattcccaggtcctccaggttttact
gggcccaggggagacaggggcctgaacggtctacctggactgcagggacacccaggcctt
acaggaaaatctggtgctccgggagcagcaggaccaaagggctttcctggtgacgtttta
ggagcagcagcaggttcccgaggggatgctgggctccccggcttcccggggttgaaaggc
gctccaggagatcaaggagtaccgggaattagaggagcggatggtaacccaggtttgcca
ggatccaaaggagatccggggccacaaggtctccctggtttgatgggattgccgggaaca
ccaggaacgcgtggattcccagggccaccaggaaaccctgggccagatggcgggcctgga
tctcaaggacttgttggtccacctggtgctaggggagaagatggtgagcaaggttttcct
ggccccgtgggcctgaaaggtctgtctggtgacaaaggtgaaacaggttacccgggatta
caaggtgtacctggcgtgactggtccccctggcataagcggaatggatggctttccagga
gataaaggctcaagaggttcacctggcattgatggtttcaaaggcatgactggcctaaaa
ggaagaccaggcatcaagggaatcaaaggagaatttggcccgtttggggcacagggcgat
aaaggcgcacagggcgcacgcggctttaaaggtgaccgtggggatcaaggccccccagga
gaacccccaaagatcaagcccagcatgatgatggaagttaagggtgaaaaaggagatgtt
ggagaaaggggcacgaagggattctttggcttaaaaggtagcaagggaatgccaggcatc
cctggaaagacaggcactcctgggtcccctgggcatcccagctacgtggccggtgtgaaa
ggggacattggcgcgaaagggctgacgggtctgaaagggtatcctggtccagccggctct
cctggcatcagaggcttccctggcagcacaggaggcaggggagaaaagggtattccagga
atttcaggccatcttggtactcctggctcacatggtgaaataggtgaacggggagatact
ataaacttaccaggcatgccaggccttaaaggggaaatcggtgtgccgggcttaacaggc
acaagaggaggcgccggacaaaaaggcgaaggaggtgatcctggtttccctggcattgaa
ggcctcaagggcacgcagggtgtccctggatctgtgggacaggaaggtttgccaggactg
gttggccccccagggcaacaaggaagccccgggacgcccggatttcaaggtcaaaaagga
actcctggctggcctggcttaccaggacaagcaggcttgcctggcttaagaggaatcagt
ggactgcatggtttaccgggcactaagggcttaccaggatcaccaggtccagatggctac
ggctctgcaggtttcccaggtgcagtgggtgacaaaggggaagcaggagagccgagcaga
gtggaaggcagccgaggacctccgggtcagaagggagacagaggtgttccaggagtccaa
ggaccctttggcattcccggacaggagggatttccagggcctcctggcatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagacggagtgccaggctatccagga
ctacaggggcagcctggaataccggctccaccaggaagcaaaggagaaagtggacaaaca
ggtgtgagtggacagattggcccaaaaggaagtagaggtgatcctggatcaacagggaga
cctggtgttcccgggtaccctggaccaaaaggtcgcaagggtgaacaaggtgtcatcggc
tttatgggcaccataggatttccaggtgatttgggacccatcggacccaagggggataga
ggagtgacaggctttcagggccctccaggctctcctggattgccccctcttcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatataggacctcaaggaagccca
ggagatatgggaccacagggtccaccgggtgatccaggtttcagaggctcacctggagat
ccaggactccagggcaggggtggcattccagctcctcccggctccagaggtgaacaagga
gcaacaggatttcagggtccagtgggatttgaaggtcagccaggccgccccggtagcccc
gggctgccaggcatgccgggtcgcagcgttagcatgggctacctgctggtgaagcacagc
cagtccgatcaagagccaatgtgccccgttggcatgaacaaactctggagtggatacagc
ctactgtactttgaaggacaagagaaagcacacaaccaggatctagggctggccggctca
tgtttggctcggtttagtactatgccattcctctactgtaaccctggggatatttgttat
tatgcaagtcgaaatgataaatcctactggctctcaactacagcacctcttccaatgatg
cctgtggcagaagatgacattaggccatatatcagtcgctgctcagtttgtgaggctcca
gctgtggcaattgctgtccatagccaagaagcatctattcctcactgccctgaaggctgg
cgcagtttgtggatcggatattccttccttatgcatactgctgctggtgatgaaggtgga
ggacagtcgctggtttctcctgggagctgcctagaagatttcagagcgactcccttcatc
gaatgcaacggcgcacgcggaacctgtcactactttgcaaataaatacagcttctggctc
actaccatcgaccagcccttccaaagcaagccctcggcagatacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaatttatag

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