Charadrius vociferus (killdeer): 104292899
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Entry
104292899 CDS
T08577
Symbol
NOTCH1
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104292899 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
104292899
NCBI-ProteinID:
XP_009890633
LinkDB
All DBs
Position
Unknown
AA seq
2415 aa
AA seq
DB search
MQSLPASITLGGPPGPAAPVPAGCAGAESSRGLGLRCTQLAESCLNGGKCETFLNGTEVC
QRQDGFASKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVNECNISPS
VCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTTYDCTCLP
GFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQLMPNACQ
NGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCECPHGRTG
LLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGANPCEHAG
KCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMPGYEGVYC
EINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNGAKCVDGP
NTYSCECTEGFSGAHCEIDIDECDPDPCHYGTCKDSIAAFTCLCQPGYTGHRCDININEC
QSQPCRMCNINIDECSSNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNECNSNPCIH
GKCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCREGFSGPN
CQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKNGGECRES
EDYESFSCSCPSGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFTGRNCDTD
IDDCKPNPCHNGGSCSDGVGTFFCECLAGFRGPKCEEDINECASNPCKNGANCTDCVNSY
TCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCPPGFTGSYCEHDINECDS
KPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNLYRCECNS
GWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGSYCEEQVD
ECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLINTYKC
SCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFVGERCEGD
VNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGGTCAVASN
TGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCTPAFTGPECQYPA
SSPCTSNPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDIIPPKIEE
KCEIAVCAGYAGNKICDAKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYFNDGKCDS
QCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLDCANNMPE
KLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYYGNEEELK
KHYIKRSTEDWSDMPSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEIDNRQCIQS
SSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPAKNSQLYPMYVVVAALVLLA
FIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNASDGTLMDD
NQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAPTPPQGEI
DADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASLHNQTDRT
GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD
LDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNNVEAAVVL
LKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH
DIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKPSTKGLSC
NGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTSPFQQSPS
MPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPSTVMSNAP
MNFSVGGAAGLNGQCDWLTRLQNGMVQNQYNPMRGNMQPGAHQQTQNLQHGMMTSLHNGL
PTTSLSQMMSYQAMPSTRLASRIPTLLQFWYTKTPYPKACTIPIRTHEQAYTKAFKFSSL
PAGLTEVTYLCCXTLKPRSXKLHRPVSSSTMAVHTILPQDSQMLPTSLPSSLAQPMTTTQ
FLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNVSDWSEGISSPP
TSMQSQLGHIPEAFK
NT seq
7248 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccctgcccgcctccatcaccctgggggggccaccaggtcccgcagcccccgtc
ccagcgggctgcgcaggggcagagagctccagggggctcggtttacggtgcactcagctt
gccgaatcctgcctcaacgggggcaagtgtgaaacttttctcaacgggacggaggtgtgc
caacgccaggatggcttcgcgagcaaaacctgccagcaggccgacccctgtgcctccaac
ccctgcgccaacgggggtcagtgcgtccccttcgaagcccactacatctgccggtgcacc
gccggcttccacggggccaactgcaagcaggacgtgaacgagtgcaacatctcgccgtcc
gtctgcaagaacggcgggagctgcaccaacgaggtgggcacctaccagtgctcctgcaag
ccggcatacaccgggcagaactgcgagcacctctacgtgccctgcaacccctcgccctgc
cagaacggggggacgtgccgccagatcggagacaccacctacgactgcacgtgcctgcca
gggttcacgggtcagaactgtgaggagaacatcaatgactgtccaggcaacaactgcaag
aatgggggcacctgcgtggacggtgtcaacacctacaactgccagtgcccacccgagtgg
acaggtcagtactgcaccgaggacgtggacgagtgccagctgatgcccaacgcctgccag
aatgggggtacctgccacaacaaccacggtggctacaactgtgtctgcgtcaacggctgg
acgggcgaggactgcagcgagaacatcgatgactgtgctatggccgcctgcttccacggg
gccacctgccacgaccgggtggcctccttctactgcgagtgcccccacggccgcacaggt
ttgctgtgccaccttgatgacgcctgcatcagcaacccctgcaacgagggctccaactgc
gacaccaaccccgtcaacggcaaagccatctgcacatgtccttcggggtacatgggacca
gcctgcaaccaggacgtggacgagtgctcgctgggagccaacccttgcgagcacgcaggg
aaatgcatcaacacccaagggtccttccagtgccagtgtctgcagggctactcgggccct
cgctgcgagattgatgtcaacgagtgcctctccaacccctgccagaacgatgccacctgc
ctggaccagatcggggagttccagtgcatctgcatgcccggttatgagggggtttactgc
gagatcaacacggatgagtgtgccagcagcccctgcctgcacaacggcaactgcctcgac
aaaatcaacgagttccactgcgagtgccccaccggcttcaacgggcacctgtgccagttc
gacatcgacgagtgcgccagcaccccctgcaagaacggcgccaagtgcgtggacggcccc
aacacctacagctgcgagtgcaccgaaggtttctcgggtgctcactgcgagatcgacatc
gacgagtgcgaccccgacccgtgccactacgggacctgcaaggacagcatcgccgccttc
acctgcctctgccaacctggctacacaggccaccgctgcgacatcaacatcaacgagtgc
cagagccagccctgtcgcatgtgcaacatcaacatcgacgagtgctccagcaacccctgc
cacaacgggggcacgtgcaaggacggcatcaacggcttcacctgcctctgcccggagggc
ttccatgaccccaagtgcctgtccgaagtgaacgagtgcaacagcaacccctgcatccac
gggaaatgccacgacgggctgaacggctacaggtgtgactgcgacccaggctggagtggg
acaaactgcgacattaacaataacgagtgtgaatccaatccctgcatgaatggtggcact
tgcaaggacatgaccagtggctacatctgcacctgcagggagggcttcagcggacccaac
tgccaaaccaatatcaatgagtgtgcttccaacccctgcctgaaccaaggcacgtgcatc
gacgatgtcgctggctacacctgcaactgtctcctgccctatacaggagccacctgcgag
gacgtgctggccccctgcgctggcagcccctgcaagaacggcggcgagtgccgggagtcg
gaagactacgagagcttctcctgcagttgcccctctggttggcaaggtcagacctgcgag
atcgacatcaacgagtgcgtgaagagcccctgccgcaacggggccacgtgccagaacacc
aatgggagctaccgctgcgcctgcagaaccggcttcaccggccgcaactgcgacaccgac
atcgacgactgcaagcccaatccatgccacaatggtggctcctgctccgacggcgtcggc
acgttcttctgcgagtgcctggctggtttccgtgggcccaagtgcgaggaggacatcaac
gagtgcgccagcaacccctgcaagaacggcgccaactgcaccgactgcgtcaacagctac
acctgcacctgcccctccggcttcagcggcatccactgcgagaacaacacgcctgactgc
acggagagctcctgcttcaacggtgggacctgcgtggatggcatcaacaccttcacctgc
gtctgtccacctggcttcacgggcagctactgcgagcatgacattaacgagtgcgactcc
aagccatgcctgaacgggggcacgtgtcaggacagctacgggacgtacaagtgcacttgt
ccccagggatacaccggcctcaactgccagaacctggtgcgttggtgcgactcctctccc
tgcaaaaacggaggcaagtgctggcagaccaacaacctctaccgctgcgagtgcaacagc
ggatggacagggctctactgtgatgtccccagtgtctcctgcgaggtggctgctaagcag
caaggtatcgatgtagcacatctctgcagaaattcggggctctgtgtggacacgggcaac
actcacttctgccgctgccaggccggctacaccggcagctactgcgaggagcaggtggat
gagtgctcccccaacccctgccagaacggggccacctgcacagactacctgggaggttac
tcctgcgagtgtgtggctggttatcatggagttaactgctccgaggagatcaatgagtgc
ttgtcccacccatgccagaatggaggaacctgcatcgatctcatcaatacctacaaatgc
tcctgccccagaggaactcaaggggtgcactgtgagatcaatgtggatgactgcagccct
ttctttgatcctgtcaccctggggcccaagtgctttaacaatggcaagtgcacggatcgg
gtaggtggctacagctgcatctgcccccctggctttgtaggggagcgctgcgagggagac
gtcaacgagtgcctgtccaacccctgcgacgcccgcggcacccagaactgcgtgcagcgg
gtcaatgactacaaatgcgagtgccgacctggctacgcaggccgtcgctgcgacaccgtg
gtggacggctgtaaaggcaaaccctgcaggaacggtggaacgtgcgcggttgccagcaac
accggccgtggcttcatctgcaaatgccccccgggcttcgtgggtgccacctgcgagaac
gactcccgcacctgtgggaacctccactgcctgaatggtggcacctgtatctccatccac
aagagctccaagtgcatgtgcacgccggccttcacgggtcccgagtgccagtacccggcc
agcagcccctgcacatccaacccctgctacaacgggggcacctgcgagttcttcagcgat
gcctccccctactaccggtgcaactgcccggccaacttcaacggcctcaactgccacatc
cttgactttgatttccaaggtgggatcgggcaggatatcatcccacccaaaattgaggag
aagtgcgagattgcggtttgcgcggggtatgccggcaacaagatctgcgatgcgaaatgc
aacaaccatgcctgcggctgggacgggggcgactgctccctcaatttcaacgacccctgg
aagaactgctcccagtcgctgcagtgctggaagtacttcaacgatggcaagtgcgactct
cagtgcaataacgctggctgcctgtacgatggatttgactgccagaaatacgaagggcag
tgcaatcctctgtatgatcagtactgcaaggatcacttctcagatggtcactgtgaccag
ggctgcaataattttgagtgcgaatgggatggtctggactgtgcaaacaacatgccggag
aagcttgcagacggcacgctggtggtggtggtcctcatcactcccgagaacctgaagaac
aactctttcaacttcctgcgggagctgagccgcgtgctgcacaccaacgtggtcttcaag
aagaaccccaagggagagtatatgatctttccatactatggcaatgaggaggagctgaaa
aagcattacatcaagaggtcaacagaggactggtcagatatgcctagtgctgtcatcaac
aaagtcaagagcagcctgtactccagggctggccgaaggcagaagagagagctcgatcag
atggatatcagaggatccatcgtctacttggaaattgataaccgccagtgcatccagtca
tcttcccagtgcttccagagcgcaaccgatgtggcagcgttcctgggtgccttggcctcc
ctcggcaacctgaacataccctacaaaatagaagccgttaaaagtgaaacagctgagccc
gcgaagaactcccagctgtatcctatgtacgtggtggtggctgcgctggtcttgcttgct
ttcattggagtgggagtactggtgtctcgtaagcggcgcagggagcatgggcagctttgg
ttcccagaaggcttcaaagtgacggagtcgagcaagaagaagcgacgagaaccacttggg
gaggattctgttggactgaaacccctcaaaaatgcttcagacggcacgctgatggatgac
aaccaaaatgagtggggtgatgaggagaccttggacaccaagaagttcaggttcgaggag
caggcgatgctgcccgacacggacgatcagacggatcacaggcagtggactcagcagcac
ctggatgccgccgacctgcgcatatcctccatggcacctactccgccgcagggggagatc
gatgcagactgtatggatgtcaacgtcagaggtcccgacggcttcaccccactcatgatc
gcctcgtgcagcggaggagggctggagaccggcaatagcgaagaggaagacgatgctccc
gccgtcatctcggatttcatttaccaaggcgccagcttacacaaccagactgaccgcacc
ggcgagacggcgcttcacctggctgccaggtactcccgctcggacgctgccaagcgcctg
ctggaagccagtgccgatgcaaacatccaggataacatgggcaggacacccctccacgcc
gccgtctctgccgatgcccaaggagtcttccagatcctgattaggaacagggcgaccgat
ctcgacgcccgaatgcatgacgggaccactcctctgatcttggccgctcgcttggctgtg
gagggcatgctggacgatctcatcaactgccacgcagacgtcaatgccgtggatgatcta
ggcaaatcggcactgcactgggcagctgctgtgaataacgttgaagctgcggtagtcctc
ctgaagaatggtgccaataaggatatgcagaacaataaggaggagaccccactgttcctc
gcagccagagaagggagctatgaaactgccaaagtcctgctggaccattttgccaaccgc
gacatcacggaccacatggaccggctcccgcgggacatcgcccaggagcgcatgcaccac
gacatcgtgaggctgctggacgagtacaacctggtgcggagcccaccgctgcacaacggc
ccgctgggggcacccacgctgtccccaccgctctgctctcccaacagctacatcggcaac
ctcaaacctgccgtccagggcaagaaggccaggaagccgagtaccaagggcctgagctgc
aacggcaaggacgccaaagacctcaaagcccggaggaaaaaatcacaagatggaaaagga
tgtctgcttgacaactccagcgtgttgtctccagtggactccctggagtcgccccatggg
tacctgtcagatgtcgcctctcctccgctgatgacctctccgtttcagcagtccccttcc
atgcctctgaatcatctgccgggcatgcccgatgcccacatgagcatcaaccacctcaac
atggcggggaagcaggatatggccatgggaaactccagcaggatggccttcgattcggtg
ccgccgcgtctctctcacctccccgtctccagccccagcacagtgatgagcaatgccccg
atgaatttctctgtcggcggagcggccggtctgaacgggcagtgcgactggctcaccagg
ctgcagaacggcatggtccagaatcagtacaaccccatgagaggcaacatgcaaccaggg
gcgcatcagcagacgcaaaaccttcaacatggcatgatgacctccctgcacaacggcttg
cccaccacaagcttgtcgcagatgatgagctaccaggccatgcccagcacccggctggcg
tccagaatcccaacacttctgcagttctggtatacaaaaactccctatccaaaggcatgc
accatccccatccgtacacatgaacaagcatacacaaaggctttcaaatttagcagcctg
ccagctgggttgacagaagtaacatatttatgctgttaaactctgaaaccacgatcttga
aagttacacagaccggtgagcagcagtaccatggcggtccacacgatcctgccgcaagat
tcccagatgctgcccacgtctctgccatcctccctcgcccagcccatgaccaccacgcag
tttctaactccaccttcccagcacagttattcctcccccttggacaacacccccagccac
cagctccaggtgcccgaccaccctttcctaacgccgtctccggagtcgccggaccagtgg
tccagctcgtcccctcactccaacgtgtccgactggtctgagggcatctccagccctccc
accagtatgcagtcacagctgggacacatccccgaagccttcaagtaa
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integrated database retrieval system
