Charadrius vociferus (killdeer): 104292936
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Entry
104292936 CDS
T08577
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104292936 (GAPVD1)
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104292936 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
104292936
NCBI-ProteinID:
XP_009890670
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNT
QSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLF
SEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLTERFSPVQQEKLFGEKGTEKFKQ
RVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAM
CTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRMKS
NLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTTLVSFMRNVM
SSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPIATRSR
SRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQ
GDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSG
SNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFD
PNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSE
APDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDL
RSECSSDFGGKDSVTSPDVDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKV
HYARPSHPPPDPPILEGAMGGNEARLPNFGSHTLIPTDLEAFKQRHSYPERLVRSRSSDI
VSSVRRPMSDPGWNRRPGNEERELPMPTTNTGAAVLVAASQSSSSSPSKDSSRGEIEERK
DSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPSPRLSA
QAQAAEDILDKYRNAIKRTSPSEGAMVNYDSTEAIGDGESMHDSPRDEALQNMSADDLPD
SASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNEIVCFL
KVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQ
GLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKT
AQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQ
VLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCS
TIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWM
QFTAAVEFIKTIDDRK
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatatacacacgctggctcatcacctcaagcaggaacggctgtatgta
aactcagaaaagcaacttattcagaggctcaatgcagatgtattgaagacagctgaaaag
ctgtaccgcacagcatggatttccaagcagcaaaggattaacttggacagactgatcata
acaagtgctgaatgttgccagcatgctaaaatcttggaggacacgcagtttgtggatggt
tataagcagctgggatttcaggagactgcatacggagaatttctaaacaggttgagagag
aaccctaggcttattgcatcctgtctcgttgccggagagaagctcaaccaggacaacact
cagagtgtcattcacacagtctttacctccatttatggcaattgcatcatgcaggaggat
gagagctacctcctccaggtcctccgttacttgatagaatttgaacttaaggaaagcgac
aaccctaggcggctgttgagacgaggcacctgtgcattcagcatcttattcaaacttttc
tctgaaggactcttttctgcaaaactttttcttactgcaactttacatgagccaatcatg
cagcttctggttgaagatgaagaccacctggaaactgatccaaacaagttaactgagaga
ttctctccagtacaacaggaaaagttatttggagagaaaggcacagaaaagttcaagcaa
agagtccaagagatggttgactccaatgaggccaagctagtgaccttggtgaacaaattc
attggctatctcaaacaaaacacttactgttttcctcacagcttgagatggattgtgtca
caaatgtacaaaacactgtcgtgtgtagacaggctggaggttggggaggtcagagcaatg
tgcacagatcttcttctagcatgtttcatctgtcctgcaattgttaacccagaacagtat
gggataatttctgatgctcctataaatgaggtggcaagatttaatctgatgcaggttggg
agacttctgcagcaattagcgatgacaggttctgaagagggggatccacgtatgaagagc
aaccttgctaaatttgacaaaagctgtgtggctgctttcctggatgtagttattgatggg
cgtgcagttgaaactcctccaatgtcttctgttaaccttctggaggggttgagtagaaca
gtggtatacatgacatacagccagctaactactttggttagctttatgcggaacgtaatg
tcaagcgatcaacttaaggaagatcggatggctttggaaaacttgctggcaaacttaccg
cagaacaaaccagggaaaagcagcagccttgaaatgactccgtataataccccacaactt
tcacctgcaactactccagctaacaaaaaaaatcgattaccaatagcaactcgtagcaga
agcagatcaaatattctaatggatcagcacggagatcatgaaggatcctcccaggagact
atcccagaagttcagccggaagaagtgctggtgatttctttggggacaggtccacagatt
actccaggaatgatgtcagaaaatgaggtcttaaatatgcagcttgcagatggcggacaa
ggagatgtccctgttgatgaaaacaaactccatggtaaacctgataaaaccttgcgcttt
tccctctgcagtgataatctggaaggaatatctgaaggtccttcaaatcgctccaactct
gtgtcatctttggatttagaaggggagtctgtgtcagagcttggcgcaggcccctctggg
agcaatggcgttgaagctctgcagctgttagagcacgaacaagccacaactcaggataat
cttgatgacaagctccgtaaatttgaaatccgtgatatgatggggttgactgatgacaga
gatatatcagaaactgtgagcgaaacttggagtacagatgtcttgggaagtgacttcgat
ccaaatattgatgaagatcgtttgcaagaaatagcaggtgcagctgcagagaacatgcta
ggcagcttgctgtgtttaccaggttcaggatccgtgttgcttgatccctgcacaggttca
accatatcagaaaccacaagcgaggcgtggagcgtggaagtattaccaagtgattcagag
gccccagacttaaaacaggaggaaagactacaagaactggaaagctgttccgggctgggt
agcacatctgatgacacagatgtaagggaggtcagttctcgacccagtacaccaggcctc
agcgttgtatcaggtattagtgcaacatctgaagatattcctaataagattgaggatctc
aggtctgaatgtagctctgactttgggggaaaagattctgtgacaagtcctgacgtggat
gaaacggcccatggagccagtcagttgacatctcctccttctcagacagattctttgctt
gcattgtttgaccctttgtcatcaaatgagggtgtgtcagctgtagtaaggcccaaagta
cactacgcaagaccctcccatccaccacctgacccgccgatcttggaaggagctatggga
ggtaatgaggcccgattaccaaactttgggtctcacactttaattccaactgatttagaa
gcattcaagcagaggcattcttatccagaaaggctagtccgcagtaggagttcagatata
gtatcatcagttcggagacctatgagtgatcctggttggaacagacgtcctggcaatgag
gagagggaacttcctatgccgaccaccaacactggagcagccgttctggtggctgcatct
cagtcatcatcttcatctcccagtaaagactcctctaggggagagattgaagaacgaaaa
gacagtgatgatgagaagtctgacagaaacaagccctggtggaggaaacgttttgtgtct
gctatgcccaaagcacctattccatttagaaagaaagaaaaacaagaaaaagacaaagat
gacatggtgcctgacagatacgcgacacttcaagatgatcccagcccaaggctcagcgca
caggcacaagctgcggaggacattctggacaaatacaggaatgcaattaagcgaaccagt
cctagtgaaggagccatggtaaactatgacagtacagaggctattggagatggtgagagt
atgcatgactccccacgtgatgaggctttgcaaaacatgtctgcagatgatctcccagac
tctgcaagtcaagtagcacagccacaaagttctgctttctcctatagggatgcaaagaag
aaattgaggttggctctttgttcagcagattctgttgccttcccgatgttgacacattca
acaaggaatggtctaccagatcacacagaccctgaagataatgaaattgtgtgctttttg
aaagttcagctagctgaagctattaacctccaagacaagaacttgatggcccagctgcaa
gagacaatgcggtgcgtaagccgctttgataacaggacctgtcgaaagctgctggcatct
attgcggaggactataggaaaagagctccatatatcgcttatttaactcgatgtcgccaa
ggcctgcaaacgacacaagcgcacttggaaaggctgctgcaaagagttctgcgagataaa
gaagtggccaacagatacttcactaccgtatgtgtgaggttactgctagagagcaaagaa
aagaaaataagggagtttattcaagatttccagaaactcacagcagcagatgataaaaca
gcacaagttgaggattttcttcagttcttatatggggctatggctcaggatgccatatgg
cagaatgccagtgaagaacagcttcaggatgcacaattagctatagaacgaagcgtgatg
aatcgtattttcaaacttgcgttctaccccaatcaggatggagatattttgcgtgaccag
gtccttcatgagcacatacagaggttatctaaagttgtgactgcaaaccacaaagcactt
cagatacctgaggtatatctccgggaggcaccatggccatctgcacagtctgaaatccgc
acaataagcgcttataaaaccccccgagacaaagtacagtgtatcctgcgaatgtgttca
accatcatgaacctgcttagtctggcaaacgaagattcagtacctggggcagatgatttt
gttcctgttctggtctttgtcctcataaaggcaaatccaccttgcttgctgtccactgtt
cagtacattagtagtttctatgccaactgtttatcgggagaagaatcatactggtggatg
cagttcacagcagcagttgaattcattaaaactattgatgatcgcaagtaa
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