Charadrius vociferus (killdeer): 104293435
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Entry
104293435 CDS
T08577
Symbol
SEC16B
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104293435 (SEC16B)
Membrane trafficking [BR:
cvf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104293435 (SEC16B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
104293435
NCBI-ProteinID:
XP_009891243
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MGKVTLRDANSSANTPCPPREPSERPRESVWGGGAVAALCPVRRPAAHVAVDFGSGAWGP
EEGPRRPPSRCVRLPWGGGWRWEPLAKNEGVRRFANITSPTAYKMGFHCLVTEVKLISHL
LGEAATKAIWDLPSCPKTGEDLAGKLVMDPWVPARPPQPWERQVARGAWGEVHRGPPPQP
RRQLLRTGPPPRPGSWDGGHLPSHPWDGGHHPRRDTSRPASRAEYYESSYPNRPYSRQGY
EDPHWQYPAASYRADYAYQSHQWQPVAWQDDRDLRQGEPYGKSTNYQDQHYYRGYHPNLT
TTPPGQDRTQTYDSSEERHVSAARSEWAGGETFESESGEASGQPREPSLLLQYRESGLSS
SGYELSQYIRDGADHYDPVLSGTWNLAQAGEPMVSTPAPVVPLKFSLPHMAVCFGAGGQL
VLVCPHRPAEGQLAHVELHSLEVILHDMKELQELQAFPGPLAREDLHKVDVMTFCQQKIA
TSCDLSTQRGRDSSLLWKLLVLLCRQNGSMVGSDTAELLMQDCKRQEKYKRQNPAANLIG
LTDDEWMSRQPGTLDLITGEVPPVVETQAQIVEKFTKLLYYGRKKDALVWAMRNQLWGHA
LFLSSKMDPRTYSWVLTGFTSTLATNDPLQTLFQLMSGRIPQAALCCGDATWGDWRPHLA
VMLSNKAGDTDLNHRAIVTMGDTLAGRGAVEAAHFCYLMADIPFGYFGVKADRMALLGSS
HRQAFAQFARTEVIQRMEIFEYCQQLRQPKFFLLPFQVYKLLYASRLADYGLPAQALQYC
EQIATAVLAHDPASHPVLAQQVMKLAERLKLSDPLLLEMPEQDQTLEPDWLVQLRACCRE
WEVEDDLPPEVAPAQPGLSWAAASRADGEPGHELPQSEGYQYDQPMPPQELSSYEDVSLQ
PPTPAPVTASPLLGVRQELQPPALSPEMATPLGGVFAEAPPQVVSTAGEAGEPWGAPLAP
GGVQTSLPAEQEELKARARTISESSTVSLGDDSQPSSESAAEDATEETAPAEAVKAGENK
SSGFRWFGWFRSKPTKETSPKAASETAPDFPTPELQERTSPSPLDAPLTAGTNLLAQPLS
RNPGAMQGENTFPITPVSVEMKGSWDADGGESTGEQTGFQESPLAVGTVPLFNPVQVSQL
AAASRPNQTRLLSQRRYPNLL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggtgaccctcagggatgcaaacagcagtgcaaacaccccctgtcccccccgg
gagccaagtgagcggccgagggagtcggtctggggtggaggagcggtggctgccctttgc
cctgtacggcggccggcggcccatgtggcagtggactttggcagcggcgcctggggaccg
gaagaagggccccggcggcctccgagcaggtgtgtgcggctgccgtgggggggcggatgg
cggtgggaacccctggccaaaaatgaaggggtccgtcgctttgccaatatcacttcccct
accgcctataaaatggggtttcactgccttgtcacagaggtgaagctgatttctcacctg
ctcggggaggctgccactaaagccatttgggacctcccctcctgccccaaaaccggagag
gatcttgctggcaagcttgtgatggacccctgggtccctgcccggccgccccagccctgg
gagaggcaggtagcccggggggcatggggagaggtgcaccgtggccccccaccgcagccc
aggcgacagctcctccgtacagggcccccacctcggcccggctcctgggatgggggccac
ctccccagccatccctgggatgggggccaccacccccggagagacaccagcagaccggct
tctcgggctgagtactatgaaagcagctaccccaacaggccatactccaggcaaggatat
gaagacccccactggcagtatccagcagccagctacagggctgactatgcctaccaaagc
caccagtggcagccggtggcctggcaggatgacagagacctgagacagggagagccttac
ggcaagagtaccaattaccaggaccagcattactacaggggttaccaccccaacctcacc
acgacccccccggggcaagacaggacgcagacctatgactcctctgaggagagacacgtc
tcagctgcccggtccgagtgggcagggggagaaacctttgaaagcgaatcaggggaggcc
agtggccagccccgagagcccagcctgctcctgcagtaccgtgagtcgggactcagctcc
agcggctacgaactcagccagtacatccgtgacggtgccgaccactatgaccccgtgctt
tcagggacctggaacctggcacaagcaggggagcccatggtgtccaccccagccccggtg
gtacccctcaagttctcgctgccgcacatggcagtgtgctttggagccggaggccagctg
gtgctggtgtgtccccaccgccctgctgaggggcagctagcccacgtcgagctacacagc
ctagaggtaatccttcatgacatgaaagagctgcaggagctacaggccttcccggggccc
ctggccagggaagatctgcacaaggtggatgtgatgacattttgccaacagaagatagct
acgagctgtgatctttcaacacagagaggcagagattcatctcttctctggaaactcctg
gtcctcctctgccggcagaatgggtccatggtgggctcggacacagctgagctgctgatg
caagactgcaagcgccaagagaagtacaagaggcaaaaccctgcggcaaacctgattggc
ctgacggatgatgagtggatgtcgcgacagccgggaacactggacctcatcacgggagag
gtccctcctgtcgtggagacgcaggcccagatagtggagaagttcaccaagctcctctac
tatggcaggaagaaagatgctcttgtctgggccatgagaaaccagctgtggggccatgcc
ctcttcctttccagcaagatggaccctcggacctatagctgggtgctcactgggttcacc
agcacactggccaccaatgaccccctgcagaccctcttccagctcatgtcaggaaggatc
cctcaggcagcgctgtgctgcggggatgccacctggggagactggaggccccacctggct
gtgatgttgtccaacaaggctggagacacggacctgaaccaccgagccatcgtcaccatg
ggagacactttggctggcaggggagccgtcgaagcagctcatttctgctacttgatggca
gatattcctttcggttactttggggtgaaggcagaccgcatggctctgctgggcagcagc
caccgtcaggcgttcgcccagtttgccaggacggaggtcatccagcggatggaaatcttt
gagtactgccagcagctacgacaacccaaattcttcctgctccccttccaggtgtacaag
ctcctctacgcctctcgcctggctgactatgggctcccagcccaggctctgcaatactgt
gagcagattgccactgcggtccttgcccacgatccagccagtcaccctgtcctggcccag
caagtgatgaagctagccgagcggctgaagctctccgacccgctgctcctggagatgccg
gaacaggaccagacgctggagcccgactggctggtacagctccgagcctgctgccgggag
tgggaggtggaagatgacctcccgccagaggtggcacctgctcagccagggctctcctgg
gctgctgcatcaagggcagatggagagcctggccatgagcttccacagagcgaaggctac
cagtatgaccagcccatgccaccccaggaactcagctcctatgaggatgtgtctctccag
ccgccgacacctgctccggtcacagcatcgccactgctcggtgttcggcaagagctgcag
ccgcccgcgctcagcccagagatggccacccctttgggaggggtttttgctgaggcccct
ccgcaggtggtgtcaacagcaggagaagctggggaaccttggggtgctccgctggcccct
ggaggggtgcagacgtccctcccagcagagcaggaggagctaaaggcaagggctcggacc
atctcagagagctccactgtctccttgggtgatgacagccaaccttcatcagagagtgca
gctgaagatgccaccgaagagactgcaccagcagaggcagtgaaggcgggtgagaataag
agctctggattcaggtggtttggctggtttcggtcaaagcccaccaaggaaacatctccc
aaagctgcatctgagacagccccggacttccccacaccagagctgcaggaacggacgtcg
ccatccccacttgacgctcctctcacagctgggacaaacctgttggctcagcctctgtcc
agaaatcctggggcaatgcaaggtgaaaatacctttcctattactccagtgtctgttgag
atgaaaggctcatgggatgcagatggtggggagtcaacaggagagcagaccggcttccaa
gaatctcccctggcggtggggacagtccctctcttcaaccctgtccaggtctctcagctc
gccgctgcttctcgacccaaccaaaccagactgctttcccagcgccgctaccccaacctg
ctgtga
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