Charadrius vociferus (killdeer): 104293598
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Entry
104293598 CDS
T08577
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104293598 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvf03032
]
104293598 (POLA1)
Enzymes [BR:
cvf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104293598 (POLA1)
DNA replication proteins [BR:
cvf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
104293598 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
104293598
NCBI-ProteinID:
XP_009891414
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MYESGSFAASRSRREKKSRRGQQEALERLKKAKAGQKIKYEVEEFTSVYDEIDEEAYSKM
VRERQDDDWIVDDDGIGYIEDGREIFDEDLDDDALGSNKKGKGGKTSMGDKKNVKKSVVS
KPNTIKSMFIASAGKKNTDKTVDLSKDDLLGDILQDLNAETVQISPPPVIMLKRKRPAGV
PLNPFSVQSQTPKVITPISKKVPAHLRKEALPPASFHPKHPNYTAKSVIVSENEDTEYVQ
KATENRGIVKTIEEKAVEVLCATLPDDDQGMMDFDEEDFDEPMEAEHVETIPETAESLKR
DKEIEKKETEQLESEKKETSVFCSLPDISCWDRIDEDEADLVVAEVQLDPNLLPLVNGEN
DDQVLKFYWLDAYEDQYSQPGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEI
DLSTGKETETPVTIMSVFKEFNDCISPKYKIMKFKSKKVEKYYAFEIPDVPAKSEYLEVK
YSAECPKLPQDLKGQTFSHVFGTNTSSLELLLMSRKIKGPCWLEIKNPQPSNQPVSWCKV
EAVAMKPGLVNVVKDLSPPPPLVVMSLSMKTTQNPKTHQNEIVAVAALIHQKFPLDKAPP
QPPFQTHFCVVSKPNDCIFPYDFKEVIKNKNAKIEIAATERTLLGFFLAKIHKIDPDVVV
GHNIYGFDLEVLLQRINVCKVPHWSKIGRLRRSNMPKLGGRGGFAERNAACGRMICDVEI
SAKELIRCKSYHLSELVHQILKTERITILPEEIRNMYSDSPHLMFMLENTWTDAKFILQI
MCELNVLPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYIVPDKQVFKKPLQK
LVDEDEDFEEQNKSKIGKKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICF
TTVQRLSSEAQKRAEVKEEDEIPELPDPSLEMGVLPKEIRKLVERRRQVKQLMKQPDLNP
DLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNL
EVIYGDTDSIMINTNSTNLDEVFKLGNKIKTEVNKLYKLLEIDIDGVFKSLLLLKKKKYA
ALTVEPTGDGKYVTKQELKGLDIVRRDWCDLAKETGNYIIGQILSDQPRDVIVENIQRRL
IEIGENVISGQIPVNQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKAGDTVS
YIICQDGSDLSASQRAYAPEQLQKQDNLTIDTQYYLSQQIHPVVARICEPIEGIDSVLIA
TWLGLDPSQFRVHHHYHKDEENDALVGGPAQLTDEEKYRDCERFKFCCLKCGTENIYDNV
FDGSGRFIEPSLQRCSKTECDELPLNYVVQMNNKLLLDIRRYLRKYYNGWLICEEPTCQN
RTRRLPLSFSRSGPMCQACRKAVLRPEYSDKALYTQLCFYRYIFDVDYAMDKVISEDDRE
YLKKKPLKREVSEAYKRLKSTVDKCLSTSGYSEVNLGKLFAVSIGRSVGESNNERQ
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagtccggaagttttgcagcatcacgttctagacgtgagaagaagtctagaaga
ggccagcaagaagcactagaacgtctgaaaaaagccaaagccggccaaaaaataaaatat
gaggttgaggagttcacaagtgtttatgatgaaatagatgaggaagcatactccaagatg
gtcagagaacgtcaggatgatgactggattgttgatgatgatgggataggttacatagaa
gatggaagggaaatctttgatgaagacctggatgatgatgctcttggttccaataagaaa
ggaaaaggtggcaagacatctatgggtgataaaaagaacgtgaagaaatctgtggtgtca
aagccaaacacaattaagtctatgtttatagccagtgctgggaagaaaaacacagataaa
actgtggacctgtcaaaggatgatttactaggcgatattcttcaagatcttaatgctgag
actgttcagataagtccaccaccagttataatgctgaaaaggaaaagacctgctggagta
ccactgaatcctttctctgtgcagtcccaaactcctaaggtaatcacccctatatcaaag
aaagttcctgctcatctcagaaaggaagctcttcctccagcttcatttcatcctaaacat
cccaattacacagcaaaatctgtcatagtctctgaaaatgaggataccgagtatgtgcaa
aaagctacagaaaataggggaattgtgaagacaatagaggagaaagctgttgaagttcta
tgtgcaacgcttccagatgatgatcagggaatgatggattttgatgaggaggactttgat
gaacctatggaagcagagcatgtggaaactatacctgagacagctgaaagcttgaagagg
gacaaggaaattgaaaagaaagagacggagcagctggaatcagagaagaaagagacatct
gtcttttgttctctcccagatatctcatgttgggacagaattgatgaggacgaagctgat
ctagtagtggcagaagttcagctggaccccaacctccttccacttgtgaatggggaaaat
gatgatcaagtcttaaaattttattggctggatgcttatgaagatcagtacagtcagcca
ggtgtggtatttttgtttggcaaagtttggattgaatctgcgaacacctatgtcagctgt
tgtgtcacagtgaaaaacattgagagaactgtttatctactgccacgtgaaacagaaatc
gacctatccactggcaaagagacagagactccggtaactataatgagtgttttcaaggaa
tttaatgactgcatttcaccaaagtataagatcatgaagttcaaatccaagaaagtggaa
aaatattacgcttttgagatcccggatgttccagcgaaatctgaatacttagaagttaaa
tattcggctgaatgccctaagcttcctcaagatctgaaaggacaaacattttcacatgta
tttggaactaacacctcgagcctggaacttctcttgatgagtaggaagatcaaaggaccg
tgctggctggaaattaaaaatccacagccttcaaatcagccagtcagctggtgtaaggtg
gaggctgttgccatgaagcctggcttggtgaatgtggttaaagatctctctcctcctcct
cctcttgtggtcatgtccctcagcatgaagaccactcagaacccaaagactcaccagaat
gagattgtggctgttgcagctctgattcatcagaaatttcctttggataaggctccacct
cagcctccttttcagacgcacttctgtgttgtttccaaaccgaacgattgcatttttcct
tatgacttcaaagaagttattaaaaacaagaatgctaaaatagaaattgctgcaacggag
agaacactgctgggatttttccttgcgaagattcacaaaattgacccagatgttgttgtg
ggtcataatatttatggatttgatctggaagtgctgcttcaaagaattaatgtgtgcaaa
gtccctcactggtccaagataggtcgactgaggaggtccaatatgccaaagcttgggggt
cgaggaggatttgctgaaaggaatgctgcttgcggtcgaatgatctgtgacgtagaaatt
tcggctaaagaattaattcgttgcaaaagttaccatttatctgaactagtccatcagatt
ttgaaaacagagaggataacaattctacccgaggaaattcgaaatatgtacagtgattct
cctcacttaatgtttatgctggaaaacacctggacagatgccaagttcattctccagatc
atgtgtgagctgaatgttctgccactggctcttcaaataacaaacatctctgggaatgtc
atgtcgaggacaatgatgggcggacgatctgaacgtaatgagttcttgctgcttcatgca
tttcatgaaaaagactatatagtgccggataaacaagtttttaaaaagcctctgcagaag
ctggtggatgaagatgaagattttgaagagcagaataaatcaaagatagggaaaaagaaa
gcagcatatgctgggggcttagtcttggatcccaaagtcggtttttatgacaagtttatt
ttgcttctcgacttcaacagcttgtacccatcaattatccaggagttcaatatctgcttt
accacagtgcagcgactgtcatcagaagcacagaaaagggcagaggtcaaagaagaagat
gaaattccagagcttccggacccatctctggaaatgggagttttacctaaagaaatcagg
aaactggtggagagaagacgccaagttaagcagttaatgaaacagccagatttaaatcct
gacctttatttacagtatgatatcagacagaaagctttgaaactcactgctaacagtatg
tatggctgcctgggattttcctacagcagattctatgccaagcctttggctgctttggtg
acgcataaagggagagagattttgatgcataccaaggagatggtgcaaaagatgaatctt
gaagtgatttatggagacacagattccattatgataaacactaatagcactaatttggat
gaggtcttcaagctggggaacaagatcaaaactgaagtgaacaagctctacaaattgctg
gaaatcgatatcgatggagtctttaagtccttactgctgttaaagaagaagaagtacgct
gctctgactgtggaaccaacaggagatgggaaatatgtaacaaaacaagaactgaaagga
ttagatatagtacgaagagactggtgtgatcttgcaaaagagactggaaactatataatt
ggtcagattctttctgatcagccccgagatgtaatcgtggaaaatattcaaaggcggctt
atagaaattggagaaaatgtgatcagtggccagatcccagtaaatcagtttgaaataaac
aaggcattgacaaaagatccacaggattatcctgacaaaaaaagcttgccgcatgtgcat
gttgccatgtggataaactctcaaggaggccgaaaggtgaaggcaggagacacagtgtca
tatatcatttgtcaggatggatcagatctcagtgccagccagcgagcatacgctccggaa
cagttgcaaaagcaagataatcttactattgatactcagtactacctgtctcagcaaata
catccagtagttgctagaatatgtgagcccatagagggaattgattctgttcttattgca
acgtggttaggactggatccctcccaattcagagtccatcaccattaccataaagatgag
gagaatgatgccttggttggtggcccagctcagctcactgatgaggagaaatatagggat
tgtgaaagattcaagttttgctgcctcaaatgcggaaccgaaaatatttatgacaatgtc
tttgatggttcggggcgatttattgaacctagcttgcaaaggtgcagtaagactgaatgt
gatgagcttcctttaaactatgtggttcaaatgaacaacaaattactgttggatattagg
cgctacctcagaaagtactataatggttggttaatatgtgaggagccaacttgccagaat
cgaacccgtcgacttcctctgagtttttcccggagtggcccgatgtgccaggcctgcagg
aaggctgttctgagaccagagtattctgataaggccctgtacactcagctctgcttttac
cgatacatttttgatgtggactatgcgatggataaagtgattagtgaagatgacagagag
tatttgaagaagaagccactcaagagggaagtctctgaggcctacaaaagactgaagagc
accgtagacaaatgtctgtccacgagtggctactcagaagtgaacctcggcaaactgttt
gccgtcagtataggaagatctgtgggagagtccaataatgaaagacagtga
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integrated database retrieval system
