Charadrius vociferus (killdeer): 104293747
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Entry
104293747 CDS
T08577
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104293747 (TAF1B)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104293747 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
104293747
NCBI-ProteinID:
XP_009891571
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MYFRVRLAKSPVQRRDWLLQEGNTESSPALHRGQSIELPTEKGFEQDVQRDFNERCAQCS
EVNWGLTDGGRFYCRSCHNVTERTREVVNTDFISNTRIQTISKGLKKQEKTDRGCEWYVC
EGFQLVLKKQAEALEALGVCPQMKDEILCNFWRRYLQKTKQAYCNRPAGETVKALSVCDS
STDVDSEPERPSLLHFLSLSESEGDLQTDCSFASSISKISESTSVCSGSVDGSSYLMKNR
KEKLRMTMPMTLSFCYMALLWLREPMTLSDLLRFVVEGHIPYLNVFQHFPEKMKLYGLDL
KIFCVESWPVYEEVYNKMLELAAFLDLPRFPDITDSCFLHPDMLCMKYLMEANLPDELHN
WTCRVVKKICIGEADFLTLVPGNKSTRNVKYDVLAAAVIVVVLKLLFLLDDHYEWLLSDF
VEERNKNNKEGGPYFEFKKWYKVIKCSLDVKEKKLDEERAKYLWRCEKPLFYSAKKKAKV
LKRRQIVVNLQNQFGKLSGSVQPAEKPNPSSFQLSWSEENTDGSCFHGHSLKGILQEKCG
LLTAMNPDYWLCTVKLCNEKLCGHLAHYREVDFPQSYHFVLRLFAFLLRIQPSYIHDEVC
VIEHKLFNKKLCKKPKYKTGLRK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtattttagagtcaggcttgcaaaatctccggtacagcgaagggactggctgctgcag
gaaggaaacaccgagagcagccctgccctgcacaggggccagagcatcgaattgcctact
gaaaaaggatttgaacaagatgtgcaaagagattttaatgaacgctgtgcccagtgttca
gaagtgaactggggtctcaccgatggaggcagattttattgcagatcttgccacaatgtt
actgagagaactagagaagttgtaaacactgattttatttctaatacaagaatccagaca
atctccaaaggtttaaaaaagcaggaaaaaactgatagaggctgtgaatggtatgtttgt
gaaggctttcagcttgtactcaagaaacaagctgaagctttagaagcattaggagtatgt
ccacaaatgaaggatgaaattctgtgcaatttttggaggcgttaccttcagaagaccaaa
caggcatattgcaacagaccagctggggaaactgtcaaagcattatcagtatgcgatagc
agtactgatgtggacagtgaaccagagagacctagccttcttcacttcttatctctctct
gaaagtgagggggacctacagactgattgcagctttgcctcatcaattagcaagatctca
gaaagcacctctgtgtgctccggatcagtagatggtagctcgtatttaatgaagaaccga
aaggagaaactgaggatgacaatgccaatgaccctttcattttgttacatggcgttactc
tggttgagagaaccaatgacattatctgatctcttaaggtttgttgttgaaggtcatatt
ccatatttgaatgtttttcagcattttccggagaagatgaaattatatggacttgatctt
aagatcttttgtgtagagtcgtggcctgtatacgaagaagtatacaacaaaatgcttgag
cttgcagcgtttttagacctgcctcgttttccagatataacagacagctgctttcttcat
ccagacatgttgtgcatgaagtacttgatggaagctaatttacctgatgaattgcataat
tggacttgtcgagtagtgaaaaagatctgtattggagaagcggatttcctgactcttgtg
cctggaaataagtcaacaagaaatgtgaaatacgatgttcttgctgcagcagtgattgta
gttgtgctcaaattactgtttttattagatgatcactatgaatggttactttccgacttt
gttgaagaaagaaataaaaataacaaagaaggtggtccgtattttgagttcaaaaagtgg
tacaaggttataaaatgttccttggatgtgaaagaaaagaaattggatgaagaaagagcc
aagtatctgtggagatgtgaaaagccactgttttattcagccaagaagaaagctaaagtt
ttaaagagaagacaaatagttgtgaacttacaaaatcagtttggcaagctgtctggttca
gtgcaacctgctgaaaagccaaatccttcaagttttcagttaagctggtctgaagaaaac
acagatgggagttgttttcacgggcatagcctgaagggaattttgcaagaaaaatgtggt
ttacttacagccatgaaccctgactattggctgtgtacagttaaactgtgtaatgagaaa
ttgtgcggtcatctggctcattacagagaagtggactttccccagagttaccattttgta
ctaaggttatttgcctttcttctgaggatacagccctcttatatccatgacgaggtgtgt
gtgatagaacacaaactttttaataaaaaactctgtaaaaagccaaaatacaagacaggc
ctaaggaagtaa
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