KEGG   Charadrius vociferus (killdeer): 104293815
Entry
104293815         CDS       T08577                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104293815 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvf03041]
    104293815 (SF3A1)
Spliceosome [BR:cvf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104293815 (SF3A1)
 Complex B
    104293815 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    104293815 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 104293815
NCBI-ProteinID: XP_009891647
LinkDB
Position
Unknown
AA seq 782 aa
MAFMKHGIAEQLVKPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVARNGPEFEAR
IRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQSAQQQLPQK
VQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQR
NYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQVYYRVEWAK
FQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQ
ERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDEDEGQKVPPP
PETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKMQEHMRI
GLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKIGPSKPN
EIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTSVVRLPPGS
VIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPSPAPMPPVH
PPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLNGQVLVFTL
PLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHLALKERGGR
KK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggcattcatgaagcatgggattgcagaacaacttgttaagccagaagaggaaccaaaa
gaggaagcagcaccagccaagcctgtggtaggaattatttaccctcctccagaggtgagg
aatattgtggacaagactgccagcttcgtagccagaaatggtccagaatttgaagctcga
attcgtcagaatgaaataaataaccctaagttcaatttcttgaaccccaacgatccttac
catgcatactaccggcacaaagtcagcgagttcaaagagggtaaagcacaggagccctcg
gctgctattcccaaagtcatgcaacagcagcaaagtgctcagcagcagcttccacagaag
gtgcaggcccaggtgatccaggagacagttgttccgaaagagccacctccggagtttgag
ttcattgcagatcctccctcaatctcagcctttgacttggacgtggtgaagctcacggca
cagttcgtggctcggaacgggcggcagttcttgactcagctgatgcagaaagagcagagg
aactaccagtttgatttccttcgcccccagcacagtctctttaactacttcactaaactg
gttgaacagtacacaaagatcttgatcccaccaaaaggcttgctcctcaaactcaagaaa
gaggccgaaaatcccaaggaagtcctagatcaggtgtattacagagtggagtgggcaaag
ttccaggagcgagagagaaagaaggaagaggaggagaaggaaaaggagcgtgttgcttat
gcccagattgattggcatgactttgtggtcgtggaaacagttgattttcagcccaatgag
caagggaatttccctcctcccaccactccagaagagttgggagctcgaatcctgatccaa
gagcgttatgagaagtttggagaaagtgaggaggtagagatggaggtggagtcagatgag
gaagatgaaaagcaagagaagacagatgagcccccagcccagctggatcaagacacacaa
gttcaggatatggatgagggctcagatgatgaagatgagggtcagaaggttcctcctcct
ccagaaaccccgatgccaccacctcttcctcccacaccagatcaggtcattgtgcggaaa
gattatgatcccaaagcctcaaaaccattaccacccgccccagctccagatgagtatctt
gtttcccctatcactggagagaaaattcctgccagtaaaatgcaagaacacatgcgaatt
ggtctcctggatcctcgatggctggagcagcgtgatcgatccatccgtgaaaagcagagt
gatgatgaggtctatgccccaggtttggatattgaaagcagcttgaagcagctggcagag
cgccgtactgatatcttcggtgtagaagagactgccattggtaaaaagatcggtgaagaa
gaaatccagaaaccagaggaaaaggtgacctgggatggccactcgggcagcatggcccgc
acacagcaggctgctcaggccaatattactctccaagagcaaattgaagctatccataag
gccaagggactggtgccagaagatgacagcaaggagaagattggtcccagcaaacccaat
gaaatcccccaaccgccccctccttcatcagcgtcaaatcccccggctagtgctcagcct
atcacatctgtgccgcgtccacccacaatgccccctcccgttcgcgccgctgttgtttct
gcagttccagtcatgcctcgtcccccgatgacttccgtggtccgtttgcctccaggatcc
gtcatagccaccccaatgccaccaataatccataccccgcgcatcaatgtggtccccatg
ccaccctctgctcctcccatcatgagcccccgcccgcctcccatgatagtaccaacagca
tttgttcctgcgcctcccgtggctccggttccttccccggcaccgatgcctcctgttcac
ccaccgccacccatggaggatgaaccagtctcaaagaaactgaagagcgaagacagcctc
atcccagaggaggagtttctgcgcaggaacaagggtccggtcacggtcaaagtccaggtt
cccaacatgcaggacaagacggaatggaaactgaacggccaagtgttggtgttcaccctg
ccgctctcagaccaggtgtctgttataaaggttaagatccacgaggccacagggatgccg
gctgggaaacagaagctgcagtatgagggcatcttcatcaaggattcgaactccctggct
tattacaacatgacgagcggctccctcattcacctggcgctcaaagaaagaggaggcaga
aagaaatag

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