KEGG   Charadrius vociferus (killdeer): 104293891
Entry
104293891         CDS       T08577                                 
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
  KO
K09271  transcription factor SOX15/30
Organism
cvf  Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cvf03000]
    104293891 (SOX30)
Transcription factors [BR:cvf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    104293891 (SOX30)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 104293891
NCBI-ProteinID: XP_009891738
LinkDB
Position
Unknown
AA seq 632 aa
MALEDKPPQVLHIKVEKPEEGDGAGCRGDSKESGDNFRCSPAPWGGKEEARVSIKREKDH
EGGGGESHNEVKVLEKRGNGKEPWRGGAVKVEPPEEAIEACRVKVEKDDAPAVGSLCGPA
HASANDHKAQPGEGFGILPEDLKIPVVIHSLPPGTRIQIQGPLPSELIHVTKVPVKQVPL
KMQSLLEPSVKIETKNVPLTVLPSDSGMPDTPFSKDKSGHVKRPMNAFMVWARIHRPALA
KANPAANNAEISVQLGLEWSKLTEEQKQPYYDEAQKIKQRHREEFPGWVYQPRPSKRKRF
PLPASAVFSSTSQSIITTSPAGICPFQSPAYSVVIPNVKNGIGHPVCEAPSAIRLPASSI
QHAGPITLFQTTSASTPSVAVPAPTLPLRPVISPQHFAEPAQAEALDVSTGLNCSLKRCT
PVFIESRNPSNITTTNSRFSVSNSEPPKEYPGVSILPRGVPLPQATPFLHSHLYESPPIG
QPAGLFGVPPRFPFYHPYFVPGPHYFPSSTCPFSRPPFGCGNFSSPVPQCLGFYEDRYQR
QEMMFSALDGNYPFKEYPEESIPEDRRSCESLELMSCYSSCNEERYLSPLPQLDVGALEE
VLSATSSTPSSIHLINVTDSDEEDEVKLLREL
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggcccttgaagacaaacccccgcaggtgctgcacatcaaagtcgagaagcccgaggag
ggagatggcgcgggctgccgcggggacagcaaagagtcaggggacaacttcaggtgctcc
ccagctccgtgggggggtaaagaggaagcccgtgtctccatcaagagagaaaaggaccat
gaagggggcggcggagaaagccacaacgaggtgaaggtgctggagaagagggggaatggg
aaggagccctggagaggaggtgctgtcaaggtggagccgcctgaggaggccattgaggcc
tgcagggtgaaagtggaaaaggacgatgcccccgcggtgggctccctgtgtgggcctgct
catgccagcgccaatgaccacaaggcgcagccgggtgaggggtttgggatccttcctgaa
gatctgaagatcccagttgtgattcactccttacctcctgggacccgcatacagatccaa
ggccctctgccgtcagagctgatccacgtgactaaagtgccggtgaaacaagtgccactt
aaaatgcagtctttactggagccttcggtaaagattgaaactaaaaatgtgcccctcaca
gtactgccctccgattcaggtatgccagatactccatttagcaaggacaaaagtggccat
gtaaagcgtccaatgaacgcatttatggtgtgggctaggattcatcggcccgccctagca
aaagctaacccagctgccaataatgcagaaatcagtgttcagcttggattggagtggagc
aaactgactgaagagcagaagcagccctattacgatgaagctcagaaaataaaacaaagg
cacagagaggaatttcctggttgggtttatcaaccacgaccaagcaaaaggaagcgtttt
ccactgcctgcctctgctgtattttccagcacttctcagagtatcatcactacaagtcca
gctggcatttgtcccttccagtcacctgcttactctgttgtcatccccaatgttaagaac
ggtattggacatccagtctgtgaagctccttctgccatccgtctgccggcttcttccatt
caacatgctggtccaattactcttttccagactactagtgcaagcactccatcagtggct
gttccagctccaaccctgcccctgcgccctgtaatttcaccacagcactttgctgaacct
gctcaggcagaagctcttgatgtatcaactgggcttaattgctctctgaagagatgtaca
ccagttttcattgagagcagaaacccaagtaacataaccaccactaatagcagattttct
gtatctaatagtgagcccccaaaggagtatccaggggtttctattttgcctagaggcgta
cctcttccccaagctaccccttttcttcactcacatctctatgagtctcctcccattggt
cagccagccggtctgtttggagtacctcctcggtttccattttaccacccttactttgta
cctggacctcactacttcccttcaagcacatgcccattcagtcgacctccatttggctgc
gggaatttctccagcccagtgcctcagtgccttggcttttatgaagacaggtaccaaaga
caggagatgatgttttcagctctggatggaaactatcctttcaaggaatacccagaagaa
agcataccagaggatcgccgcagctgtgagagccttgaattaatgtcctgttacagcagc
tgcaatgaggagcggtatttaagtcccctacctcagctggatgttggagcattggaggag
gttttgtcagccacctcatctactccctccagcatccacctaatcaatgtaactgacagt
gatgaggaagacgaagtaaagttgttgcgagaattgtaa

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