Charadrius vociferus (killdeer): 104293891
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Entry
104293891 CDS
T08577
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104293891 (SOX30)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104293891 (SOX30)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104293891
NCBI-ProteinID:
XP_009891738
LinkDB
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Position
Unknown
AA seq
632 aa
AA seq
DB search
MALEDKPPQVLHIKVEKPEEGDGAGCRGDSKESGDNFRCSPAPWGGKEEARVSIKREKDH
EGGGGESHNEVKVLEKRGNGKEPWRGGAVKVEPPEEAIEACRVKVEKDDAPAVGSLCGPA
HASANDHKAQPGEGFGILPEDLKIPVVIHSLPPGTRIQIQGPLPSELIHVTKVPVKQVPL
KMQSLLEPSVKIETKNVPLTVLPSDSGMPDTPFSKDKSGHVKRPMNAFMVWARIHRPALA
KANPAANNAEISVQLGLEWSKLTEEQKQPYYDEAQKIKQRHREEFPGWVYQPRPSKRKRF
PLPASAVFSSTSQSIITTSPAGICPFQSPAYSVVIPNVKNGIGHPVCEAPSAIRLPASSI
QHAGPITLFQTTSASTPSVAVPAPTLPLRPVISPQHFAEPAQAEALDVSTGLNCSLKRCT
PVFIESRNPSNITTTNSRFSVSNSEPPKEYPGVSILPRGVPLPQATPFLHSHLYESPPIG
QPAGLFGVPPRFPFYHPYFVPGPHYFPSSTCPFSRPPFGCGNFSSPVPQCLGFYEDRYQR
QEMMFSALDGNYPFKEYPEESIPEDRRSCESLELMSCYSSCNEERYLSPLPQLDVGALEE
VLSATSSTPSSIHLINVTDSDEEDEVKLLREL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgaagacaaacccccgcaggtgctgcacatcaaagtcgagaagcccgaggag
ggagatggcgcgggctgccgcggggacagcaaagagtcaggggacaacttcaggtgctcc
ccagctccgtgggggggtaaagaggaagcccgtgtctccatcaagagagaaaaggaccat
gaagggggcggcggagaaagccacaacgaggtgaaggtgctggagaagagggggaatggg
aaggagccctggagaggaggtgctgtcaaggtggagccgcctgaggaggccattgaggcc
tgcagggtgaaagtggaaaaggacgatgcccccgcggtgggctccctgtgtgggcctgct
catgccagcgccaatgaccacaaggcgcagccgggtgaggggtttgggatccttcctgaa
gatctgaagatcccagttgtgattcactccttacctcctgggacccgcatacagatccaa
ggccctctgccgtcagagctgatccacgtgactaaagtgccggtgaaacaagtgccactt
aaaatgcagtctttactggagccttcggtaaagattgaaactaaaaatgtgcccctcaca
gtactgccctccgattcaggtatgccagatactccatttagcaaggacaaaagtggccat
gtaaagcgtccaatgaacgcatttatggtgtgggctaggattcatcggcccgccctagca
aaagctaacccagctgccaataatgcagaaatcagtgttcagcttggattggagtggagc
aaactgactgaagagcagaagcagccctattacgatgaagctcagaaaataaaacaaagg
cacagagaggaatttcctggttgggtttatcaaccacgaccaagcaaaaggaagcgtttt
ccactgcctgcctctgctgtattttccagcacttctcagagtatcatcactacaagtcca
gctggcatttgtcccttccagtcacctgcttactctgttgtcatccccaatgttaagaac
ggtattggacatccagtctgtgaagctccttctgccatccgtctgccggcttcttccatt
caacatgctggtccaattactcttttccagactactagtgcaagcactccatcagtggct
gttccagctccaaccctgcccctgcgccctgtaatttcaccacagcactttgctgaacct
gctcaggcagaagctcttgatgtatcaactgggcttaattgctctctgaagagatgtaca
ccagttttcattgagagcagaaacccaagtaacataaccaccactaatagcagattttct
gtatctaatagtgagcccccaaaggagtatccaggggtttctattttgcctagaggcgta
cctcttccccaagctaccccttttcttcactcacatctctatgagtctcctcccattggt
cagccagccggtctgtttggagtacctcctcggtttccattttaccacccttactttgta
cctggacctcactacttcccttcaagcacatgcccattcagtcgacctccatttggctgc
gggaatttctccagcccagtgcctcagtgccttggcttttatgaagacaggtaccaaaga
caggagatgatgttttcagctctggatggaaactatcctttcaaggaatacccagaagaa
agcataccagaggatcgccgcagctgtgagagccttgaattaatgtcctgttacagcagc
tgcaatgaggagcggtatttaagtcccctacctcagctggatgttggagcattggaggag
gttttgtcagccacctcatctactccctccagcatccacctaatcaatgtaactgacagt
gatgaggaagacgaagtaaagttgttgcgagaattgtaa
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