Charadrius vociferus (killdeer): 104293913
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Entry
104293913 CDS
T08577
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104293913 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104293913 (TAF4)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104293913 (TAF4)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104293913 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
104293913 (TAF4)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104293913 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
104293913
NCBI-ProteinID:
XP_009891761
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MGLSAPEITKAGAGGVQGGVINHNTRSQTSALDGATTTSTSTTTAAAGGSDVTAAPGTLS
QGKSVVISTMATALSTRNGKIGTTTVQTLNGSNVVMNSHHTGGAAFAGAPVTANPASAPA
VAPLVNNGPGSVGKGNTVNAVLPSASNTVIQTSFLNTAVSSASSSSPTVISSQPPPSIGT
GAPTVTLVRPPIHTAGPTVAAAGAATQNGSNTVINSTISVGSFPAVATATVGSGVSLQTS
LVNSQSGSTVPAAPATQVIKSESPKTIVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGL
SNVAPNPGGIPPAAPGTPTGMAKGTANTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQP
PQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTS
APPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQ
TTTLGTATAVQTGTPQRTVQGTTATSTAATETMENVKKCKNFLSTLIKLASSGKQSSETA
ANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQ
SQQQQPTTQATIATIPSAAVLLSSSVQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQG
QSTPLVIQQSQKAGALIRPPQVTLTQTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPA
VLPGNKAIATVSTQVAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNS
ELVGTLTRSCKDETFLFPAPLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKL
SETAQQKNISYKDDERYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQE
DPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAA
VPGSSGVGTTRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgggactgagtgccccagagatcacaaaagcaggagcaggaggagtgcaagggggcgtt
attaatcataacaccaggtcccagacttcagctctggatggagccaccacaacgagcacc
agcaccaccactgcagcagcaggaggatctgatgtcactgctgctccagggaccctcagt
cagggcaaatcggtggttatcagcaccatggcaactgccttgtccaccaggaacggaaag
attgggaccacgacagtgcaaactttgaatgggagtaacgtggtgatgaactctcaccat
acaggaggtgctgctttcgctggggctcctgtgactgctaaccctgcttctgcacctgct
gttgcccctctcgttaacaacggacctggatctgtgggaaaaggaaatactgttaatgct
gttttgccatcagcttccaacactgtcatccagacttctttccttaatactgctgtgtcc
tctgcatcttcctcctcgcccacagttatctcctcgcagccaccaccaagcattggaact
ggggcgcctacggtaacgcttgtaaggccaccgattcacacagcaggacccacagtagct
gcagctggtgcagccactcaaaacgggagcaatactgtgatcaattcaaccatcagtgtg
gggagctttcctgctgttgctacagccactgtgggatctggagtttccctccagacatcg
cttgtgaacagccagtctggttccactgtgccagcagctcctgccacacaggtcatcaaa
tctgagtctcctaaaactatagtccaggcagtatcccaacagcagacgctggctactggt
ggccagcccagtactacagggggtaacatgattattgggcaaactatgcaagctgggctc
tccaatgttgctcccaatcctggtgggatacctcctgcagctcctggcacccccacagga
atggctaaaggcactgccaatacggtggcacaaagtctgccaaggactccaacagcaact
acgagtggaatcagagcaactttgactcctacagttttagcacctcgtttgcctcagcca
cctcagaatccaactaacattcagaattttcagttaccaccaggcatggtacttgtgcgt
agtgagaatgggcagttgctgatgatccctcaacaagcgttggcgcagatgcaagcacag
gctcatgcccagtctcagcctcaaaatactatgactcctcgtcctgctacacctaccagt
gctcctccagtgcagatatcgacagtgcaggctccaggaacacctattattgcacgacag
gtgacaccaactactattatcaagcaagtgtctcaggctcaaacaacagtgcaacccaca
acaacgctacagcgtcctcctgttgtgcaacctcagattgttctgggtggtactgcacaa
acaactacgttggggacagcaacagctgtacaaactggaactcctcagagaacagtgcaa
ggaacaacggcaacctccactgctgccacagaaactatggaaaatgtgaagaaatgcaaa
aactttctgtccacattaataaaactggcatcatctggaaaacaatcttcagagactgcg
gctaacgtgaaagaattggtacagaacctgctggatggaaaaattgaagcagaagacttt
accagtaggctgtacagagaacttaattcttcacctcaaccttaccttgtgcctttcctg
aagaggagtttacctgccttgagacagttaacaccggactctgcagctttcattcaacaa
agtcagcagcagcagccaacaacgcaagcaacgatagcaacgattccatctgcggcggtg
cttctaagctcctcagttcagcgcacagcagggaaggcgactgcaactgtaacaagtact
ctccaacaacctgtaatcagcctaactcagcctacacaagttggtgttagtaaacaaggg
cagtctacaccactggttatccaacagtctcaaaaagcaggggcattgataaggcctcca
caggtaacgttgacacagacaccaatggtagcattgcggcagccacacagtcgtattatg
ctcactactcctcaaattcaactgaatcaacttcagacagtacctgtggtaaaaccagca
gtattacctggaaacaaggctattgccaccgtttcgacacaagtagctgctgctcagaag
aataaactgaaagaacctgggggaggctcttttagggatgatgatgacattaatgatgtt
gcatcaatggctggagtcaacctgtcggaagaaagtgctcggatattggcaacaaactct
gagctagtgggcacgttaacaaggtcctgtaaagacgaaaccttccttttcccagcacct
ttacaaagaaggatattagaaataggtaaaaaacatggaataacagaaatccatcctgat
gtagttagctatgtatcacatgctacacaacaaagactacaaaaccttgtggaaaaatta
tcagagactgctcaacaaaagaatatttcttacaaggatgatgaaagatacgaacaagca
agtgacgttcgggcgcagctcaagttctttgaacaacttgatcaaatagaaaagcagcgt
aaagatgaacaagaaagggaaattttaatgcgtgcagcaaagtctcgatctcgacaagaa
gatccagaacagcttaggttgaaacagaaagccaaggagatgcagcaacaagagctagca
cagatgcgacagagggatgccaacctgactgcattagctgcgatcggtcccagaaagaaa
aggaaagtcgattcaccgggatctggatcagggacagagggatctggttcaagtgcagca
gtcccaggcagctctggagttggaacaaccagacagtttacgcgacaaaggataacgcgg
gtgaacctcagggacctcatattttgtttagaaaatgagcgagagacaagccattcacta
ttgctatataaagcattccttaagtaa
DBGET
integrated database retrieval system
