KEGG   Charadrius vociferus (killdeer): 104294051
Entry
104294051         CDS       T08577                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03082  ATP-dependent chromatin remodeling
cvf03083  Polycomb repressive complex
cvf04110  Cell cycle
cvf04330  Notch signaling pathway
cvf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104294051 (HDAC2)
   03083 Polycomb repressive complex
    104294051 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    104294051 (HDAC2)
   04350 TGF-beta signaling pathway
    104294051 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104294051 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cvf03036]
    104294051 (HDAC2)
Enzymes [BR:cvf01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104294051 (HDAC2)
Chromosome and associated proteins [BR:cvf03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104294051 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     104294051 (HDAC2)
    BRAF-HDAC complex
     104294051 (HDAC2)
    REST complex
     104294051 (HDAC2)
    SHIP complex
     104294051 (HDAC2)
    MiDAC complex
     104294051 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104294051 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104294051 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    104294051 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104294051
NCBI-ProteinID: XP_009891907
LinkDB
Position
Unknown
AA seq 458 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD
RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV
HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED
KKETEDKKADVKEEDKSKDSSGEKTDAKGAKSEQLSNP
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaaacctcatcggatccgaatgacccacaacttgctgctaaattatggcttatacaga
aaaatggaaatttatcgaccccacaaagctactgctgaggaaatgaccaagtaccacagt
gatgaatacatcaaatttctccgatcaataaggcctgacaatatgtctgagtacagcaag
caaatgcagagatttaatgttggagaagattgtcctgtatttgatggcctgtttgagttt
tgtcagctgtcaactggaggctctgttgctggggcggtaaaattgaacagacaacaaaca
gacatggctgttaattgggctggaggacttcaccacgccaagaaatcggaggcgtctggt
ttctgttatgtcaatgatattgtacttgctatccttgaattactgaagtatcaccaaaga
gtgttgtatattgatattgatatccatcatggtgatggtgttgaagaagcattttatacc
acagatcgtgtcatgacagtatcattccataagtatggtgaatattttccgggcacaggg
gaccttagggacattggtgctggaaaaggcaagtactatgctgtcaactttccaatgagg
gatggtatagatgatgaatcgtatggtcagatattcaaaccaattatatccaaagtaatg
gagatgtaccagcccagtgcggtggtattacagtgtggagcagattcactgtctggtgac
aggctgggatgctttaatcttactgttaaaggtcatgctaaatgtgtggaagttgtaaag
acttttaacttgccattgctgatgttaggaggaggaggatatactattcgtaatgttgct
cgatgctggacatatgaaactgctgttgccttagattgtgaaattcctaatgagttgcca
tacaatgactactttgagtatttcggaccagacttcaagcttcatattagtccttcgaat
atgactaatcagaatacaccagaatatatggagaagatcaagcaacgcttatttgaaaac
ttgcgtatgttacctcatgcacctggtgtacagatgcaggccattcctgaagatgctgtt
catgaagatagtggagatgaggatggagaagatccagacaaacgcatttctattcgagca
tctgataagcgcatagcctgtgacgaagaattttcagattctgaagatgaaggggaaggt
ggacgacgaaatgttgcagatcataagaaaggagcaaagaaagccaggatagaggaagac
aaaaaagagacggaggacaaaaaagcagatgtgaaggaggaggataaatccaaggacagc
agtggtgaaaagacagatgccaaaggagcaaaatcagaacagctcagcaatccttga

DBGET integrated database retrieval system