Charadrius vociferus (killdeer): 104294052
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Entry
104294052 CDS
T08577
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04510
Focal adhesion
cvf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104294052 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104294052 (LAMA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Laminin_G_3
Gasdermin_C
GBP_PSP
COG3_N
Motif
Other DBs
NCBI-GeneID:
104294052
NCBI-ProteinID:
XP_009891909
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MALISAWPLVSPILFFLRCFSSSTASSEGGIFQFDFEGSSAVSTQEATVIRGQQQAVATG
SWVPFAEGCQEGFYRTSSGKCSPCNCNGNANRCLDGSGICVDCQRNTTGQHCEQCPDGFI
GDTVRGVPTFCQPCPCPLPALANFAVSCYRKSGSVRCVCKENYAGPNCERCAPGYYGNPL
LIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRHTTGFKCERCAPGYYGDARFAKNC
TECNCGGRMCDSQTGECLADSPEVSTGTDCPTISCDKCIWDLTDDIRLAVLAIDESKSTL
LSISTGVAAQKRLNDLNLTTTHLQEAMSKKKNHAELWTIQVDDAADEMNDFLREAATLDE
QGNEASSKGLLVQKETMETNSRATQLVQQLSNMRDNIQEISSKMKYYAVQQELSPEEIAQ
KLSMAEEMLEEIKRRKPFTNQRQLADEEENAAEELLQQVEEFHERYNDTRSLVSDVLEQV
SEQDVKLSDLEEALDQALDYVTQTEDMNKENTASLQRREKQHEKIKEQIDEVNGILLNAT
TILAEPQKINSELSEVIKNVSGFYAEIDGAKKELQEKIANLSLFDDDLVEKAMHHAHNLR
RLADELDRNLYGVDTNGLVQRAINASNVYENIAGYIKEANEAALLALNTTNRVNDAAVGI
DTQLIYHKGKSEELLNRALELQRTAADSNDLTIADTSRHVNGTLARMNALRGQLMRAITK
MQSAEPVEARERLEQAKLKIAEAVSDTMTVKEATAPMDENVRLWSQNLQDFQHSSAAYNS
VVHSAGDAVKKLTEVFPHLRDKLRRVEQKAPANNISSNIQRIRELIAQTRSVASKVQVSM
MFGGQSAVEVNPKINVEELKSFTSMSLYIKFPKDNPQLAASPDRFILYLGNKNAKNYIGL
AIKNDNLVYIYNLGGQDVEIPLDAKPVSTWPSYFSIIKIERIGRHGKMFLTVPSLSSTAE
EKFIKKGEVLGPGSLLNLEPEDAVFYVGGVPPDFKLPPSLNLPGFIGCLELATLNDDVIS
LYNFKHVYNIDTTTSPPCARNKLAFTQSRAVSYFFDGSGYALARNIERRGRFSQVTRFDI
EVRTPTDNGLILLMINGSMFFSLEMHNGFLYLRYDFGFSTGPVLLEDSMKKAQINDAKFH
EISIIYHNSKKMILVVDRRHIKSVDNERTAMPFTDIYIGGAPAEILHSSISSHLAGSIGF
KGCMKGFQFQKKDFNLLEEPGTLGISYGCPEDSLMSRKAYFNGESFIASSQKVSLFSEFE
GGFNFRTLQPNGLLFYYSEGSDVLSISMDRGAVVLNASGTKIQSPDRNYNDGKTHFIITS
VTPERYELTVDDKKQSKKNPAKDRAGKSPDSVKKFYFGGSPLRTQQANFTGCISNAYFTR
LDREVEVEDFQQYSEKVQTSLYGCPVESPPVALLHKKGKNSSKAKGNRNKKVGRDKDKIS
QPSIGFKKLYQEVNTQRDPQCHLPMNPKATEHAYQFGGTANSRQEFDHIPKDFSQRAQFS
ISLKTHSSHGMIFYVSDQKETNFMALFVAHGRLIFMFNAGHQKIRIKSQEKYNDGLWHNV
IFIRGKNIGRLIIDGLRVLEEPFSGNVNAWQVTEPLYIGGVAPGKAVKNIQINSVYSFSG
CLSNLQLNGRPITSASQTFSVTPCFEGPSEAGTYFSSEGGYVVLDESFSLGLKFEVVFEI
RPRSSSGILLHGHSVNGEYLNMHMRNGQVTVKLNNGIRDFSTSVTLKQSLCDGRWHRIAV
IRDANVVQLDVDSEVNHVVGPLNPKATDHREPVFIGGVPESLLTSSLTTRNSFIGCIRNF
MIDEKPVSFSKAALVSGAVSINTCPAA
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatctccgcctggcccctcgtttctcctatattattctttttgagatgcttc
tcctccagcacagcctcgagtgagggaggcatttttcagtttgactttgaaggtagctca
gcggtcagcacgcaagaagccactgttatcagagggcagcagcaggcagtagctactgga
agttgggtgccttttgctgagggatgccaagaaggattttaccgtaccagctcaggaaaa
tgctctccttgcaattgtaatggtaatgcaaacagatgccttgatggatctggaatctgc
gtggactgccagagaaacacaacaggacagcactgcgagcaatgtccggatggcttcatt
ggtgacactgttagaggagtgcccacgttctgccagccctgcccctgccccctgccagca
cttgccaactttgcagtctcctgttacagaaaaagtggaagcgtgcgctgtgtctgtaag
gaaaactacgcaggacccaactgtgaaaggtgtgcccctggttactatgggaaccctttg
ctaattggaagcacttgtaaaaaatgcgactgcagtggcaactcggacccaaacctgatt
tttgaagactgtgatgaagtgacaggccagtgccgcaactgcctgcgccacaccaccggg
ttcaagtgcgaacgatgcgctccgggttactatggggatgccagattcgcgaaaaactgt
acagaatgtaactgtggagggagaatgtgtgacagccagactggagaatgcctcgcagac
agtcctgaagtttctacgggcacagactgcccaaccatcagctgcgataaatgtatttgg
gatttgacagatgacatccgattagcagttctggctattgatgaaagcaaatcgactttg
ctgagcatttctacaggtgttgcagctcaaaagcgcctgaatgacctgaacctcactacc
acccatctccaggaagcaatgtccaaaaaaaagaaccatgctgagctttggaccatccag
gttgatgacgctgcagatgaaatgaatgatttcctgagagaggcagcaacacttgatgaa
cagggaaatgaagcatccagcaaaggcctactggtacagaaggaaaccatggagaccaac
agccgtgctactcagcttgtgcagcagctcagtaatatgagggataacattcaagaaatc
agcagcaagatgaaatactatgcagttcaacaagagctgagccctgaagaaattgcccag
aagctgagcatggctgaggagatgctggaggaaatcaaacgccgtaagcctttcactaac
cagaggcaacttgcagatgaggaggaaaacgcagcggaggagttgctacagcaagttgaa
gagtttcatgagaggtacaatgacaccagatctctagtgtctgatgtgctggagcaggtc
agcgaacaggacgtcaagctgtcagacctggaggaggcactagaccaggcacttgactat
gttacacaaacggaggatatgaataaggaaaacacagccagtcttcaaaggcgtgagaaa
caacatgagaaaataaaagagcaaatagatgaagtgaacggcattctgttaaatgccaca
actattttggcagaaccacaaaagatcaactctgagttaagcgaggtaataaagaatgtg
tcagggttctacgcagaaatagatggagcgaaaaaggaattgcaagaaaaaatagccaat
ctgtctctgtttgatgatgatttggtagaaaaggctatgcatcatgcacacaacctaaga
agacttgctgatgagctggaccggaatttgtatggtgttgatacaaatggtttggtacaa
agggcaataaatgcttcaaatgtatatgaaaacattgccggttatatcaaagaagctaat
gaagctgcattgctggcactgaacacaacaaaccgggtcaatgacgctgcagttggaatt
gatactcagctcatttaccataaaggtaaaagtgaagaactgctcaaccgagccttggag
ttacaacggacagcagctgacagtaacgatttaactattgcagacactagccggcatgtt
aacggcactcttgctagaatgaatgctctgcgaggccaactaatgagagccatcacaaaa
atgcaatcagcagagccagtggaggcccgagagcgtttggagcaagctaaactgaagatt
gcagaggccgtaagtgataccatgacagtaaaggaggctacagcccccatggatgagaac
gtaaggttgtggtcccaaaacctgcaagacttccagcacagttcagcggcatacaacagt
gttgtgcattcagctggggatgcagtgaagaaacttacagaagtcttccctcatctccgg
gacaaactgcgcagagtagaacagaaggcaccagcaaacaatatttcttccaacattcag
cggatcagagagttaattgctcagaccaggagtgtagcaagcaaggtccaagtttctatg
atgtttggaggccaatcagctgttgaagtcaatccaaagatcaacgtggaggaactgaaa
tctttcacttccatgagcttgtacataaagtttccgaaagacaacccacaacttgcagca
tctccagacagattcattttgtacctcggaaacaaaaatgcaaaaaattacattggtcta
gcaattaaaaatgacaaccttgtgtacatttataatctggggggccaagacgtggagata
cctctggatgccaagccagtcagcacctggccttcgtacttcagcatcatcaaaattgag
aggattggaagacacggcaaaatgtttttaactgtgcccagtctcagcagcacagctgaa
gaaaaattcatcaaaaagggagaggttcttggtcctggctctctccttaatttggaacct
gaagatgctgttttctatgttggtggagtgcctccagacttcaagctccctcccagctta
aacctacctggcttcatcggctgcctggaactggctaccctgaacgatgatgtgatcagc
ctatacaacttcaagcacgtctataacatcgacaccaccacatcgccaccttgtgccaga
aataagttggctttcactcagagccgggctgtgagctatttctttgacggctctggctat
gccttggcaagaaacattgagagaaggggaagattcagccaggtgactcggtttgacata
gaagttcgaacgcctacagacaacggattgatccttctgatgattaatgggagtatgttc
ttcagtctagagatgcacaatggtttcttgtacctccgttatgactttggcttcagcact
ggccctgtactgctagaggactccatgaagaaagctcagattaacgacgctaaatttcat
gagatttctattatatatcacaattctaagaagatgatcttggtagtagacaggcgacat
ataaaaagtgtggacaatgaaagaacagcaatgccattcacagacatctacattggagga
gcgcctgctgagatcttgcactccagcattagctcacatctggcaggaagtattggcttt
aaaggctgcatgaagggcttccagttccaaaagaaggatttcaacttgttagaagaacca
ggaaccctgggaatcagctatgggtgcccggaggattcactgatgtcccgcaaagcatat
ttcaatggagagagcttcattgcatcaagccaaaaagtgtccctctttagtgaatttgaa
ggaggctttaatttccggacattgcagcccaacgggctgctgttttactattctgaagga
tcagatgtattatccatctctatggacagaggtgctgtggttttaaatgcaagtggaacc
aaaattcaatcaccagaccgaaattacaatgatggaaaaacccatttcatcattacttct
gttaccccagaaagatatgagctgactgttgatgacaagaaacaaagcaagaagaatcca
gcaaaggacagggcagggaaaagcccggacagcgtcaagaagttttattttggtggctct
cccctcagaacgcagcaagccaactttactggctgcataagcaacgcttacttcactagg
ttggatcgagaggtcgaagtggaagatttccagcagtactctgagaaagttcagacttct
ttgtatggatgccctgttgaatctcctccagttgctcttctccacaagaaaggaaaaaac
tcgtcaaaagccaaaggaaaccgtaataaaaaggtcggaagagataaagacaagatttca
cagccttcaattggcttcaaaaaactgtatcaagaagtgaatacacaaagagaccctcag
tgccacttgcccatgaatcccaaggcaactgaacatgcgtatcagtttggaggaacagct
aacagccggcaagaatttgatcacataccaaaggatttcagtcaaagagctcagttctct
atcagtctgaaaactcactcatctcatggaatgattttctacgtctcggatcaaaaagag
accaacttcatggccctttttgttgctcatggccgactgatttttatgtttaatgctggt
catcagaagataaggattaagagccaagagaaatacaatgatggcctttggcacaatgtg
atatttattagaggaaaaaatattggtcgcttgataattgatggtctccgagtactggaa
gaacctttcagcggtaatgttaatgcctggcaagtcactgaaccactgtatattgggggt
gtagctccaggcaaagctgtaaaaaatattcagattaactctgtctacagttttagtggt
tgtctcagcaatttacaactcaatggaagacccattacttcagcttcgcaaacatttagt
gtaacgccttgctttgaaggcccatcagaagcgggaacatacttttcatcagaaggagga
tatgtcgtccttgatgaatccttcagtttaggcctgaaatttgaagttgtttttgaaata
cgtccacgaagcagctcaggaattctactgcatggtcacagcgtgaatggagagtacttg
aatatgcacatgagaaatggacaggttacagtgaaactgaataatggaatcagggatttt
tcaacttcagtgacactgaaacagagtctctgcgatggcaggtggcaccgaattgcagtt
attagagatgctaatgtggtgcagctggatgtagactctgaagtcaaccatgtggtagga
ccactaaatccaaaggcaactgaccacagggaaccagtgtttattggaggcgtaccagag
tctctgctaacgtccagcctgaccacacgcaactccttcattggctgcattcgtaacttc
atgattgatgaaaaaccagtgagttttagtaaagcagctttggtcagtggtgctgtaagc
atcaatacctgtccagcagcctga
DBGET
integrated database retrieval system