Charadrius vociferus (killdeer): 104294312
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Entry
104294312 CDS
T08577
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104294312 (SAMD4A)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104294312 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
104294312
NCBI-ProteinID:
XP_009892205
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRLSRTQARFLQLCLEHSLADCTELHILEG
EANNPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGGFGSQSRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGISVSASSWQDKNLACENGHLPLYSSSSVPTTINTIGTSTSTIL
SGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVASS
GSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDILEGGNLRVPLQELHQMILTPIKAYSS
QNSSTEEHSRDADSHHPSSLLGSDSQGSDCKDSAAGGMQQHHLPGCEGESGGAPLPEGDL
PGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTEIQKKRLLSWKQQVQKLF
RSFPRKSLLELSGYRQQRRGLEISGSIGTAGIAGGRQGKRGPRHFQIPSRNLPTARLGLL
GPSGLLGTPQRSPAASPAILKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPVHTSPQT
MLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALSDGVDRTSTI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagaccaggtcggcgtcttggccggttggttcaagggctggaacgagtgc
gagcagactgttgcgctgctctccctcctcaaacgcctcagccggacccaggctcgcttc
ctccagctctgcctggagcactccctggcagactgcaccgagctccacatcctcgaaggg
gaggccaacaaccccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcttgttaacccacctgcctttactgaagcccggaaacatcgaggcaaaagtcgaa
tatatgaaactcttgcctaaaatcctggcccactcgatcgaacacaaccaacacatcgag
gagagcaggcagctgctgtcctacgccttgatacaccctgccacctccttggaggacagg
agcgccctggccatgtggctcaaccacctggaggaccgcacgtcaggtggcttcggcagc
cagagcagaggtcggtcggattcggtggactacgggcagacgcactactatcaccaaaga
caaaactccgacgacaaactcaacggatggcaaaactctcgagactcgggcataagcgtc
agcgcttccagctggcaggacaaaaacctggcgtgcgagaacggccatctgcccctctac
tcctcctcctccgtccccacaaccatcaacaccattggcactagcacaagcaccattctc
tcaggccagacacaccacagccctttgaaacgctctgtgtcccttaccccacccatgaat
gtgccaaaccaacctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcatcccttccgatcatgcccccctgtctccacaaagcagtgtagcctcttcg
ggaagtggtgggagtgaacatttagaagatcagccttccgctcgtaacacattccaggag
gaagggagtgggatgaaagatgtcccagcctggctgaagagcctccggctgcacaagtac
gccgccctcttctcacagatgacgtacgaggagatgatggccctcaccgaatgccagctc
gaggcacaaaacgttaccaaaggcgcaaggcacaaaatagtcatcagtatccaaaagcta
aaagaaagacaaaacctgctcaaatctttagaaagggacatcctggaaggtggcaacttg
cgtgtcccgctgcaggaactacaccaaatgatcctcacccccatcaaagcctactcatcc
caaaactcgagcacggaggagcacagccgggacgcggactcgcatcacccctcctccctg
ctgggctcagacagccaaggctctgactgcaaggactctgccgcgggggggatgcagcag
caccatttaccgggatgcgagggcgagtccgggggggcccctttgcccgaaggtgacctg
cccggacagttcaccagagtgatggggaaagtgtgcacacaacttttagtttcccgacct
gacgaagagaatataagttcctatttacagctcatagacaaatgtctaatccacgaggcg
tttacagagatacagaagaagcggctgctgtcatggaaacagcaggtgcagaaactcttt
cggtctttccctcggaaatccctcctggagctgtcaggctatcggcagcagaggagaggt
ttggagataagtgggagcattgggacagctgggattgctggaggaaggcaggggaaacga
ggcccccgccatttccagatcccctcccgcaacctccccaccgcccggctggggctgctg
ggccccagtgggctgctgggcaccccccagcgcagccccgccgccagccccgccatcctc
aagcaaggcagacagaacctctggtttgccaaccccgggggcagcaacagcatgcccagc
cggagccacagctcggtgcaaaggacgcgctcactgccggtccacacctccccgcagacc
atgctgatgtttcagcagccagagttccaggtgccggtgactgaacctgacatcaacaac
aggctggagtccctgtgcctgagcatgacggagcacgcgctcagcgatggcgtcgaccga
acctccacgatctag
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