Charadrius vociferus (killdeer): 104294315
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Entry
104294315 CDS
T08577
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104294315 (WDHD1)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
104294315 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Beta-prop_WDR5
Ctf4_C
WD40
HMG_WDHD1
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
HMG_box
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Tricorn_2nd
eIF2A
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_IFT122_1st
NBCH_WD40
HMG_box_2
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
104294315
NCBI-ProteinID:
XP_009892208
UniProt:
A0A0A0B532
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MPSAQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAASNNAIQIHTFPEGAPDGILTRFTMNANHVIFNSDGTKIAAGSSDFMVKV
VEVADSSKQKTFRGHDAPVLSLSFDPRDVYLASASCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGSGKLLAIPVDKVVKLYRRETWDSQFDLSDTFITQPLNVVAWSP
CGQYLAAGSVDGSIVVWNVDTQECIERMKHEKKYSICGLAWHPKYRQIAYTDTEGNLGLL
ENVGDGKKSNDKVASTVTKDYNDLFDGEDDDYLNGDTIEPQSSPKAGANEDDGDDDDDLM
PTSVHLRRAVIDDDDNSLDIGMIKANSSLLEKEDDDNDHTDGFPALPPSSTQQPFYDGPM
PTPKQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSIHHATHLPNSL
NHTMADLSTEAILLACESTEELASKLHCIHFSSWDANKEWTVDMPKDEDIEAICLGQGWA
ACATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMIIYHRGTGFDGDQCLGVQLME
LGKKKKQILHGDRLSLTKKSYLIWVGFSAEGTPCYVDSEGIVRLLNRGLGNTWIPVCNTR
EHCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILSFKLPYCQVTTEKGQM
EEQYWRSVVFHNHVDYLSKNGYELDENVKSQSVKEQQELLMKLFALSCKLEREFRCVELA
DLMTQNVVNLAIKYASRSRRLNLAQRLSEMAVEKASELATAPEDEEEEEDFRKHLNAGYS
NSATEWSRLPVRNAQQDQDMEDAEETDAREEVEETPEVHKPRPNPFSKGVVSAEVTTPKS
VVIASSSQGRVNPFKVSSNKKDTVVPSANVLDTMSKYSRKTSLSSNRAVNKQNPPVIKPL
IPKPKSKQALAASFFQPRTPNSSEKTVEEREEKSGNESRDVKVTAQENTENRRPKTGFQM
WLEENRANILKDNPDLNEAEVIKEGMSRFRMLSSEERMVWTEKAKGGTDNDLTEDKKRKR
PTADEEEAKKNPEQKSEDSNLSKKPKPLDQSTNVRLSAFAFKQS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcgcaaaagccgatgcggtacggccacaccgagggccacacggacgtctgc
ttcgatgacactgggagctgcattgtaacttgtggcagtgatggagatgttaggatttgg
gaaaacctggatgatgatgatccaaagtccattaatgtgggagaaaaggcctattcctgc
gctctaaagaatggaaggctgatcacagcagcgtcgaacaatgctattcagatccataca
tttcctgaaggagctccagatggcatccttactcgtttcaccatgaatgcaaaccatgtc
atctttaatagtgatggtaccaaaattgctgccggatctagtgactttatggtcaaagtt
gtggaagtggctgatagcagcaagcagaaaacattccgaggacatgatgctcctgtttta
agcctgtcttttgaccctagggatgtttacctggcatcggcgagctgtgatggttctgtc
agagtatggaaaatcgcagatcagacatgcacgacaagctggccgctgctgcagaaatgt
aatgatgtgataaatgctaaatcaatatgcaggcttggctggcaacctggcagcgggaag
ttgctggcaattcctgtagataaagttgttaaactatacagaagagaaacctgggatagt
caatttgatctatcagatacattcatcactcagcccttgaatgttgtggcctggtctcct
tgtgggcagtatctggcagctggaagtgtggacgggagtatagtggtgtggaatgtggac
acccaggagtgcatagaaaggatgaagcatgagaaaaaatactcaatttgtggactggca
tggcaccccaaatataggcaaatcgcttatacagatactgaaggaaatctggggttgttg
gaaaatgtcggtgatggaaagaaatcaaatgacaaggttgctagtacagtgacaaaagat
tacaatgatctctttgatggagaagatgatgactatttaaatggagatacgattgaacca
cagtcttccccaaaggctggagctaatgaagatgatggtgatgatgatgatgaccttatg
ccaacttcagtccatctgagacgggcagtaattgatgatgatgataactcactagatatt
gggatgataaaagctaattccagtcttcttgaaaaggaagatgacgacaatgatcatact
gatggctttccagctttaccaccgtcatctacacaacagcctttctacgatgggccaatg
ccaacccccaagcaaaagccgttccagtctggctccactcctgcacatctcatgcatcgt
ttcatggtatggaactcagttggtatcattcgctgttacaatgatgagcaagacaatgct
atagatatagaatttcatgatacctccatacatcatgcaacacacctgccaaactctctg
aatcacacgatggctgacctctctactgaagctattttactagcctgtgagagtacagag
gaacttgcaagcaagctccactgcattcattttagctcatgggatgcaaacaaggagtgg
acggtagacatgccaaaggatgaagacattgaggctatctgtctaggtcaaggctgggct
gcttgtgccactagtgccttgctagttcgtgtgtttacagttggaggagttcaaaaagag
atcttcagtctcccaggtccagtggtgtctatggcaggacatggagagcagttgatgatt
atctatcacagaggtactgggtttgatggggaccagtgcctcggagtacagctgatggag
ctaggaaaaaagaaaaaacaaattttgcatggagaccgtctttctcttactaagaaatcc
tatttgatatgggttggattctctgcagaaggtaccccgtgttacgtggattctgaggga
attgtgcggttgttgaaccgaggacttgggaatacttggattccagtgtgtaacacgaga
gagcattgcaaaggaaaatctgatcattattgggtagttggcatccatgaaaatccccag
cagctcaggtgtattccctgtaaaggagcccgattccctcctacgctaccacggcctgct
gtggcaatattatcttttaaacttccttactgtcaagttacaacggaaaagggacagatg
gaggagcagtactggcgttctgttgtatttcacaaccatgtggattacttgtcaaaaaat
ggctatgagcttgatgaaaatgttaaaagtcagtcagtgaaagaacagcaagaactttta
atgaagctgtttgctctgtcttgtaaactggagcgtgaatttcgttgtgtggaacttgct
gacctcatgacacaaaacgttgtgaatttagctatcaagtatgcttctcgctctcgaaga
ctaaatttagctcagcgacttagtgaaatggctgtagaaaaagcaagtgagttggcaaca
gcaccggaagatgaagaggaggaagaggatttccgaaagcatctgaatgctggttacagc
aactccgccacggagtggagtcggctgccagtcagaaatgctcagcaggaccaagacatg
gaagatgctgaggaaactgatgcccgtgaggaagtagaagaaacaccagaagtgcataaa
ccaaggccaaatcctttctccaaaggtgtcgtttcagcagaggtgactactccaaagtct
gttgtaattgcatcaagcagccaaggacgagtgaatccctttaaggtgtcatccaacaaa
aaggacacagtggtcccctcagcaaatgttctggacactatgagcaaatactcaaggaaa
acttctttgtctagcaatcgagctgtaaacaagcagaaccctccagttataaagcctctg
attcccaaacccaagtccaagcaggctttagcagcctccttcttccagcctcgtacacct
aactctagtgaaaaaacagtggaagaaagagaagaaaaatcaggaaatgagtcccgtgat
gtcaaagtcactgcacaggagaacactgaaaacagaagaccaaagaccggattccagatg
tggctagaagagaacagagcaaacattttgaaagataatcctgatctgaatgaagcagaa
gtaataaaagaaggcatgagtcgatttagaatgctgtcgtcagaagaaagaatggtgtgg
actgagaaagcaaaaggaggaacagataatgatttaacagaagacaaaaagagaaagcgt
cccaccgctgatgaagaagaagcgaaaaagaatccagagcaaaaatcggaggactcaaat
ttatccaaaaaaccaaagcctttagatcaatctacaaatgtcagattgtcagcttttgca
ttcaagcaaagctaa
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