Charadrius vociferus (killdeer): 104294413
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Entry
104294413 CDS
T08577
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvf03009
]
104294413
03036 Chromosome and associated proteins [BR:
cvf03036
]
104294413
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104294413
Ribosome biogenesis [BR:
cvf03009
]
Eukaryotic type
Pre-60S particles
Helicases
104294413
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104294413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
UTP25_NTPase-like
AAA_22
Motif
Other DBs
NCBI-GeneID:
104294413
NCBI-ProteinID:
XP_009892318
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MVKPSFAASNGVTSPAAQSASGGAATGEQDSDAEHKGFSPLHRQSPSQKCAPLCAATALS
LLAGPLKKYLARCPELTEEAKEGAFSNFPLSESTINLLNARGVKYLFPVQVKTFQPIYDG
KDLIAQARTGTGKTFSFVLPLIEKLQSVSQDGRRGRAPKVLVLVPTRELATQVAKDFKNL
TRKLSVACFYGGTPYKEQIDLLKSGIDILVGTPGRIKDHIQNSKLELSSVKHVVLDEVDH
MLDMGFAEQVEEILGFAYKKGSENNPQTLLFSATCPRWVYDVAKKYMKDEYEQIDLIGKK
TQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSHGRTIVFCETKKEANELAMNASLKQD
AQSLHGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIH
RSGRTGRAGRTGICICLFQRREEDLLKQVEHKAGITFKRVGVPSATDVIKASSNDAKRLL
EAIPPSAIDYFRKSAQELIDEKGAVAALAAALAHISGASYIQQRSLLNSTAGFVTMVLKC
SIEMRTMSYAWRGLKEQLGEEVDAKVSAMRFLKGKTGVCFDIPVDELSNIQEQWRDTRRW
QLSVAKELPELEEYPQEVGRGFSRFGNGRQGDSGFKRNRWFKNGNQEHDFNKSLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaccttcctttgctgcgagcaatggtgtgacatctccggcagcccagagcgca
tccggcggcgcagccactggagagcaggacagcgatgcagagcacaagggtttctccccg
ctgcacaggcagtcgccgtcccagaagtgtgcaccactttgtgctgcgacggccctttct
ctgctggcaggccctttgaagaagtatttggcgaggtgtcccgagctgacagaagaagca
aaagaaggcgccttctccaatttccctctctccgaaagcaccatcaaccttctcaatgct
cgaggtgtaaaatacctgttccctgtgcaagtgaagacttttcaacccatttacgatggc
aaagacctaattgctcaagctcgaacgggaactgggaaaacgttttcttttgttcttccg
ctgattgaaaaacttcagagtgtctcacaagacgggagaagaggccgtgcaccaaaagtg
ctggttcttgttccaacccgggaactggcaactcaggtagccaaagacttcaagaatctt
accaggaaactgtcagtggcttgtttttatggaggaactccgtataaagaacagattgat
ctccttaaaagtggcattgatattttagtgggaactcctggacggatcaaagatcacatt
cagaacagcaagctggaactttctagcgtgaagcacgttgttttggatgaagttgatcac
atgttagacatgggctttgctgaacaagtggaagaaatcttaggatttgcttataaaaaa
ggttccgagaacaacccccagacgctgctgttttctgcaacttgtccacgatgggtatat
gatgtagcaaaaaaatacatgaaagatgaatatgaacaaattgacctgattggaaagaag
actcaaaggactgccacgactgtggaacacttggccatacagtgtcgctcatctcagaga
gcaggagttctaggggatataattcaagtctacagtggcagccacgggcggaccattgtc
ttctgtgagaccaagaaggaagcgaatgaactggctatgaatgcttcgctcaaacaggat
gcccagtcattgcatggtgacattccacagaaacagagagaaattacattaaaaggcttt
agaaatggtgtgtttgaagttctaattgcaacgaatgtagctgcccgtggtttggatatt
cctgaggttgaccttgttatacagtgttcaccgccaaaagatgttgattcctacatccat
cgttctggacgtacgggtcgagctggccggactggtatctgcatctgtttatttcagaga
agagaagaagatcttctgaagcaagttgagcacaaagcagggattacatttaagcgtgta
ggtgttccttctgctacagatgttattaaagcttcaagtaatgatgccaaaaggttgttg
gaggccattcctccttctgcaatagactacttcagaaaatctgctcaagagctcatagac
gaaaaaggagcagttgctgccctggctgcagctctagcccatatttctggggcatcttac
atacagcagcgctccttactcaactcaactgcgggctttgtgaccatggtgttaaagtgc
tcaatagaaatgcgtactatgagctatgcctggcgaggactaaaagaacagcttggtgag
gaagtagatgccaaagtatcagcaatgcgtttcctcaaggggaagacgggggtgtgcttt
gatatccctgttgatgaactgagtaacatacaggagcagtggagggacaccaggcgctgg
caactgtcggtggcaaaggagttgcctgagctggaagagtacccccaggaggtgggacga
gggttctccaggttcggaaacgggaggcaaggtgacagcggcttcaagagaaacagatgg
tttaagaacggaaatcaggaacatgattttaacaagtcacttgattag
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