Charadrius vociferus (killdeer): 104294414
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Entry
104294414 CDS
T08577
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvf03009
]
104294414
03036 Chromosome and associated proteins [BR:
cvf03036
]
104294414
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104294414
Ribosome biogenesis [BR:
cvf03009
]
Eukaryotic type
Pre-60S particles
Helicases
104294414
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104294414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
LRIF1
SPATS2-like
Motif
Other DBs
NCBI-GeneID:
104294414
NCBI-ProteinID:
XP_009892319
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MLVQETTGKKEKKEKKAKRHEKPRKRKAQTDESEQSEDDADPPKLKKSKSGIKQNGHTRE
ESPENARLSSLNIKSAHKKRPSNSSETSSGDGDSDQEQEMTEEQKEGAFSNFPISKGTVQ
LLQARGVTYLFPVQVKTFDSVYSGKDVIAQARTGTGKTFSFAIPLIEKLQGDSQERRRGR
SPKVLVLCPTRELANQVAKDFKDITRKLTVACFYGGTPYNGQIDLMRSGIDILVGTPGRI
KDHLQSGKLDLTKVKHVVLDEVDQMLDMGFAEQVEDILRVAYKKDSEDNPQTLLFSATCP
HWVYDVAKKYMKSKYEQVDLIGKRTQKAATTVEHLAIECHWSQRAAVIGDVIQVYSGSHG
RTIVFCETKKEANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGTFKVLVATNVAAR
GLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEHQLRYVEQKAGIT
FKRVGVPTATDIIKASSKDAIRCLDSVPHTAIEYFKESARWLIQEKGPVNALAAALAHIS
GATSIEQRSLLNSDAGFVTMILHCSEEINNMSYAWRRLRELLGDDVDRKVNRMCFLKGKM
GVCFDIPAADQKEIEARWEDSKQWRLCVATELPELVESQRGGGGGGNGRSFSSSRNGRRG
SSGRNRFRGRGQKRSFDRAFDR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgcaggagacaactggtaagaaggagaaaaaagagaagaaggcgaaacgccat
gagaaacctcggaagaggaaggctcagactgatgaaagcgagcagtcggaggacgatgcc
gatcctccgaaactcaagaaatccaagagtggaattaaacaaaacggtcatacgagagaa
gaaagcccggagaatgcaagattgtcttccttaaacattaaatctgcccacaaaaaacga
cccagcaattctagtgaaacatcaagtggcgatggtgacagtgaccaagagcaggagatg
actgaagaacagaaagagggtgctttctccaactttcctatttccaaagggactgttcag
cttcttcaagctcgaggagtgacatacctgtttcccgtgcaagtgaagactttcgactca
gtatattctggcaaagatgtaattgctcaagcacgaactggaacagggaaaacattctct
tttgctattcccttaattgaaaagcttcagggagactcacaggaaagaagaagaggccgt
tcaccaaaggtgctagttctttgtccaacaagagagctggcaaaccaggttgccaaagat
ttcaaggacatcacaagaaagctaactgtagcttgtttttatggaggaactccatataat
ggacaaattgatctcatgagaagtggcattgacattttggttgggacacctggtcgaatc
aaagatcaccttcagagtggcaaactggaccttaccaaagtgaaacatgttgtacttgat
gaagttgaccagatgctggacatgggatttgctgagcaagtggaagacattttacgagtt
gcatacaagaaggattctgaagacaatccccagacactactgttttctgcaacttgcccg
cattgggtgtatgatgtggctaagaaatacatgaagtctaaatacgaacaggttgacctt
attgggaaaagaactcaaaaggctgctacaacagtagaacatttggcgatagagtgtcac
tggtctcagagagctgcggttattggagatgtcattcaggtgtacagtggcagtcatggg
aggacgatcgtcttttgcgagaccaaaaaggaggcaaatgaactggctctgaatgcttca
atcaaacaggattgccagtcattgcatggtgacattcctcagaagcaaagagagatcacg
ctgaaaggttttagaaatggtacatttaaagttctggttgcaactaacgtagctgcccgt
ggtttagatatccctgaagttgacctggttgtgcaaagttcaccaccaaaggatgtggag
tcctatatccatcgttctggacgcacaggtcgagctggacggactgggatctgtatctgt
ttttatcagcgaaaggaagaacatcagttaagatacgtggaacaaaaagcgggcattaca
ttcaagcgtgttggtgttcctaccgcaacagatataataaaggcttccagcaaagatgcc
atcaggtgtctggattctgttcctcatactgctattgagtatttcaaagagtctgctcgg
tggctaatacaagaaaagggaccagttaatgccttggctgcagctttagcccatatttca
ggtgctacttccattgagcagcgctccttgctgaactcggatgcgggatttgttacaatg
atactacactgctctgaagaaataaacaatatgagctatgcttggcgaagactgcgagaa
ctgttgggtgatgacgttgataggaaagtgaacagaatgtgtttcctcaagggaaaaatg
ggtgtgtgctttgatattcctgcagcagaccaaaaggaaatagaggcaagatgggaagat
tcaaaacaatggcgtttgtgcgtggcgactgaattaccagagttagtagaatcacagcgc
ggaggaggaggtggaggaaatggccgaagcttttcaagctccaggaatgggcggcgtggt
agctctggtagaaacagattcagaggcagaggccagaaacgaagttttgacagagcattt
gatcgttaa
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