Charadrius vociferus (killdeer): 104294600
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Entry
104294600 CDS
T08577
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cvf00535
]
104294600
04091 Lectins [BR:
cvf04091
]
104294600
Proteoglycans [BR:
cvf00535
]
Cell surface proteoglycans
Others
104294600
Lectins [BR:
cvf04091
]
C-Type lectins
Others
104294600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
Cadherin_C_2
TMEM52
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
104294600
NCBI-ProteinID:
XP_009892524
LinkDB
All DBs
Position
Unknown
AA seq
2398 aa
AA seq
DB search
MAGDTWLFSSEITEDLSDRDVRACLSFYGDSFVELNTTEASSQTSLQLRFRTSKPHGLLF
LAAGKKDYCLMELRSGNLQLRINFGVGERVLHSQQRSQLNDLAWHLVELHHEHDNVTLVI
DKHDRTGAKMPGILHELNIDYGFYVGGTSKLDVPYLVGALPNFRGCIDDVSFNQLDILMP
LRPSPGFKNIYEVSVGCSDEFFAGEDEPISFFSSRSYVSFPSWNVDDEGILKYTLQSSAA
RGLLLYHPGQAGDFIAMEIEDGLIKAYVGKHKNRTQLSSRRSVNDSHWHYIELKFTAEYL
QLTLDEETVKKTLPPQSKLPLLKGSLFVGGVDDSTRSEVIKLELTSVSGKYARGGSFKGC
LRDLKVNSEKKSLKNVLVTKDISAGCETQSAFNTNLSLEMAVKHPTVKAAPTFAISPKSS
VSLGKEDKSHLLALSNLIVLEGGQASLKSKHIKVNLDFEKLGIHQSQILFEIKEPPSHGE
LKLDVKPAQEVNTFSMQDVWQGKILYVHDGSEDTYDYFNFSISTGSEKIVSPYLQGNEQH
VFSITVTPVNDAPEITLPEGNLLLLLENSKKRLTSDLIKVLDKDTDPVDLSLSVLGNLNA
DAGFLENSEHPGKAITTFSNEDLRKGNVFFVHTGVKNSRIVLRASDGEKVSNTVVLRVMA
VHLDYRVVNCSGIKLMQGVTALITPRHLAVETNANLQELEIRYEITEPPQFGEVQRQHSR
GEWKRVNSFSQRSVQRSRVRYCSTFKEIQQENVTDQFKFKVSIGNKISEEYMFPIKVKWL
RYSLLKHAPLEIEKSKKKYLNSDNLFAVIVDLEIPEDELHFKLLSLPKSGQILLNDQPLK
KDSVFSQKDVNDKKVAYELISRYHEDNCDSFRFLISTKYLESNLYDFEVYIKSDFRNIIL
TNNGLTVTEGEGELITSTKLFVQTQDNTTFQYKVIQFPKHGKLKLINFSGSFESNDNLTT
FTNKDITDKRLMYVHDDSETAFDEFLVRASSGESGKGANFDPEVEPLSVEIRFNISVQLK
NDEKPVRVIDKIFNVVRNGQRLLTLADLCYHDPDSDFDDGQLLYTRRGISNGDLVLRNDT
LHRLYQFKQADLEQKQVLFIHRGADFGRFVLFVTDGKHYTSLLLEVSATDPYIRLANNTG
LLVQKGKEETVTTTNLSAITNQDIRNDHEITYEIFSFPKYGRIYVNNLLMDSFTQLDLIK
GYVIYRHDDSNNLIDTFNVTVHARDVHLDAGVHVRIYLESHQWPPRVVNKNSLLVEEGKP
VKISKGKLQVVHENSSPSEIVFILRQLPVHGYIRKFSSEKSYLGADQRPVLSFTQQDIDE
GKVQYVQTVSDQLDDCFSLDVTNGVRTVTGIEISVDIIPRMIPLEVQNFTVIEGGSKALV
EDYLKISSRHFAGLSCEFILIEQPKHGYVENSQVPGIKLTMFTRKQVEQELIYYVHDDSE
ELMDNFTVIVNNTELWKQSLPQTVFVTVTAVNDEAPVIKVNRILQVWVGSVTEISVDDLC
AEDKDSSPSELIYSITPPSNGHLALKSSPNKSILSFTQAHIIDGQLVFVHNGAMSGGFNF
QVTDGLNFAPRQIFSITARMLVISLEVNKGLGVFPGSRKPILRHDLKAVTNDVTNTGNRT
ITFMIVTSPKLGRLIRVSSDNTTQEILSFTQSMVDEGVIMYEHLHAESAGWSAEDFFTFT
VSSPPSSLDLQVFHIDISYEITRHDRNSRLLANTGAVVQEGGRVLINKTNLDASNLLIKL
PEVQRFMYEVWYQVVSLPQHGMIVVGERNVTKEKPNFSQYILNKFGIVYVHDNSESRSDN
FTFAVWLNLKSKSATKPHSEVLEEMFNITVVPVNDQAPELKTKRLHLKVLQGDVSVLGSE
NLKVEDLDNTPAELKYTIVSNPNNGYLAMKSNLSVSIKDFTQADVDSGKVWFVQDGSSSS
GVFYFSVTDGKHRPLYKLFSLEVIPIALVLVNLTNVALPQGQTSVTITNMQLSAVTNGKS
TNIMYEITQPLKYGHLMIGNEQVTKFEQTDLYSGRLSYHLTNLTASREVLEFMVFTAESN
LTGQVLNIAVKPLVQVVPNMQISNQAAYKFRSIDLDASELANLTNSNPRFEVIVPPSHGR
IVKKRFVNDTVFEDVQTFTQADIDSGVVLLDIDTNMTGIDSLNDSFTFILRADTVQPAVG
YFQYSIVPYSPSLVQDFTTEVPSVTSTTTLKIYTTSKDEPPASSQNAEPTAASQKTVPTM
WPGQNGWGNLHEEGPLLNLAMGTSGSAGTKTTAQVNARSPREQAGESSNPWYIIIPLVLV
SVLLMVAVISVCILLICQKKEKTKPPVKSQTDAVLSSPDRCLERSLTIPSVTVTPLLKGA
ERSTASTFMAVRHEQLLPTVVSTTVERSQQNSWLSLDPEMIQYCRKTNPALKRNQYWV
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagacacgtggctcttctcatcagagataacagaggatctctctgacagagat
gtaagagcatgtttatcattttatggtgatagctttgtagagttgaacacgacagaagca
tcctctcagacatccttacagttgcggtttcgaacaagcaagccgcatggactgcttttt
cttgcagctgggaagaaggattattgtttaatggagctacgctcaggaaatttacagttg
agaattaactttggcgtgggggagcgagtactgcattctcagcaaagatctcagctgaat
gatttagcttggcacctggttgaactgcatcatgaacatgataatgtcacattggtaatt
gataaacatgatagaactggtgcaaaaatgcctggaattctccatgaattaaatattgat
tatggattctacgtaggtggtactagtaaacttgacgttccctaccttgttggagcactg
cccaatttccgaggatgtattgatgatgtgtcattcaatcagctagacattctgatgcct
ctgagaccttctcctggctttaaaaatatctatgaagtttcagtgggatgcagtgatgaa
ttctttgcaggtgaagatgaacccattagtttcttcagttccagatcctatgtttctttc
ccatcatggaatgttgatgatgagggaatcttgaaatatacattacaatcctcagctgca
cgtggcttgctgctttaccatcctgggcaagcaggagatttcattgcaatggaaatagaa
gatggattaattaaagcctatgttggaaaacataaaaatagaacccagctttcctctcgt
aggtctgtcaatgacagtcattggcactacatcgaactgaagtttactgcagaatatttg
cagctgacattggatgaagaaactgtgaaaaaaacattgcctccccagagcaagctgccg
ctcctgaaggggtccctgtttgtaggtggtgtagatgatagcacacgatcagaagtgatt
aagttagagctaacttcagtgtctgggaagtatgccagaggagggtctttcaaaggttgc
ttgagagatctgaaagtgaattcagaaaagaaatcactgaagaatgttctggtaacaaag
gacatttcagctggatgtgaaacacagagtgcttttaatacaaatctttctttagagatg
gctgtaaagcaccctactgtgaaagcagccccaacatttgccatttctcccaaaagctct
gtctctctgggcaaggaagacaaaagccaccttttagctctaagtaacttgattgtgcta
gagggcgggcaagcttcactcaaatctaaacatattaaagtcaacttggactttgagaaa
ttagggattcatcagtcacaaattctttttgaaataaaggaaccaccctctcatggagag
ttgaaactagatgtcaaaccggcgcaggaggtaaatacattttctatgcaggacgtgtgg
caagggaaaattctttatgtccatgatggctctgaggacacttatgattattttaatttc
tccatttctaccggcagtgagaagattgtgtctccatatttgcagggaaatgagcagcat
gtgtttagcattactgtcactccagtaaatgatgcgcctgagatcacacttcctgaggga
aacttgcttcttctcttagagaactcaaagaaacgtttgactagtgatctgataaaagtc
ctagataaggatacagatcctgtggatctcagtctttcagtgcttggaaatctgaatgca
gatgcaggatttttggaaaattcagagcatcctggaaaagctattactactttttctaat
gaggacttaagaaaaggcaatgttttctttgtccacacaggcgtcaaaaactcaaggatt
gttctgagggcaagtgatggtgagaaagtgagcaacactgttgtattacgtgtcatggca
gttcatttggattacagagttgtcaactgctcaggaataaaactaatgcaaggtgttaca
gctctcatcacacctaggcatctggcggttgaaacaaatgccaacctccaggagctggag
atacgatacgagatcacagaaccaccccagtttggagaagtccaaaggcagcattcaagg
ggggaatggaagcgagtcaactctttttctcaacgctctgttcagcgcagccgtgtgaga
tactgtagcacttttaaagaaattcagcaagaaaatgttactgaccaatttaaattcaaa
gttagcataggaaacaaaatcagtgaagaatacatgtttccaatcaaggtgaaatggtta
aggtacagtttattgaaacatgctcctcttgaaattgaaaaatcgaaaaagaagtacttg
aattcagataatctttttgctgtaattgtggatctagaaatacctgaagatgagcttcat
tttaaattgctgtccctaccaaagagtggacaaatactgcttaatgaccagcctttgaaa
aaagattctgtctttagccagaaggacgttaatgataaaaaagtggcatatgaattaatc
agcagataccatgaagacaactgtgattcatttagattcctcatttctacaaagtacctg
gaatcaaatttatacgactttgaagtctacatcaaatcagatttcagaaacattattttg
actaacaatggcctaactgttactgaaggtgaaggagagttaataacaagcacaaaattg
tttgtgcaaacacaggataatacaactttccaatataaagttatacagtttcctaagcat
gggaaattaaaactcattaatttttcaggctcatttgagagtaatgacaatctcaccact
ttcaccaacaaagatataactgataagcgccttatgtatgtgcatgatgattctgagaca
gcatttgatgaatttcttgtcagagcttccagcggagagtcagggaagggggcaaacttt
gatccagaagtagagcctttgtcagtagaaattagattcaacatttctgtccaactgaag
aatgatgagaaaccagtacgtgtaattgataagatatttaatgtagtgagaaatgggcag
cgattattaactttggcagatctttgctatcatgatcctgattctgattttgatgatgga
cagttgctatatactagacgtggcatttccaatggggacttggtgctaagaaatgatact
ttgcacagactctaccagttcaaacaagcggacctggagcaaaagcaagtcctgtttata
caccgtggtgcagattttgggcgttttgtgctctttgtgacagatggcaagcactatacc
tctttgcttctagaagttagtgccactgatccttatattaggttggcaaataacacaggt
ttgttggttcaaaaaggaaaagaggaaacggttacaacaactaacctaagtgctattaca
aaccaagacatcagaaatgatcatgagattacatatgagatattctctttcccaaaatat
ggaagaatatatgtaaataatctattgatggattcctttactcaacttgatctgataaag
gggtatgtgatctacaggcatgatgacagcaataaccttattgacacatttaacgttacg
gtccatgctagagatgtccatctggatgctggagtgcatgttcgcatatatttggaaagt
catcagtggccaccaagggttgtgaacaaaaacagtctcttagttgaagaaggaaaacca
gttaaaatcagtaaaggaaaactgcaagtcgttcatgaaaacagttctccgtctgagatt
gtgttcatcctaagacagcttccagtacatggatacattcggaagttttcctctgaaaaa
agttacctcggtgctgaccaaaggccagttttaagcttcacacagcaagatattgatgag
ggcaaagttcagtatgtgcagacagtttctgaccaactggatgactgtttttctctggat
gtgaccaacggtgtccgaacagtgactggaatagagatctctgtagacatcatccccaga
atgattcccttggaagtacagaacttcacagtaattgaagggggctcgaaagccttggtg
gaagactatctaaaaatttctagtaggcactttgcaggactcagctgtgaatttattttg
attgagcagccaaaacatgggtatgttgaaaactctcaggttcctggcataaagttaacc
atgtttaccagaaaacaggtggaacaagaattaatctactatgttcatgatgatagtgag
gaactgatggacaattttactgtaatagtaaataacacagaattgtggaaacaaagcttg
ccccaaactgtatttgtaacagttactgcagtaaatgatgaagctcctgttataaaagtt
aacagaattcttcaggtctgggtgggttcagtcacagaaataagtgttgatgacctctgt
gcagaagacaaggactcctcaccatcagaactgatatattccattactccacctagcaat
ggacacttggctctgaagtcatctccgaacaagagcatccttagtttcacccaggctcat
ataattgacgggcagctggtatttgtacacaatggagcaatgtctggaggtttcaacttc
caggtaacagatggtttgaactttgcacctcgacagatttttagcatcacagctcggatg
ctagtcattagccttgaagtgaacaaaggactcggagtctttccaggttccaggaaacct
attttacgacatgatctgaaagctgtaaccaatgatgtgaccaatacaggaaacagaact
ataacttttatgattgtaacttccccaaaacttggaaggctgatcagagtaagttctgat
aataccactcaggaaatcctcagttttacacagtctatggtggatgaaggtgtcatcatg
tatgagcacttacatgctgagtcagctggctggagtgcagaagatttctttacctttact
gtctcctctccgccatcatctctggacctccaggtgttccatattgacatttcatatgaa
attacgaggcatgatcggaacagtcgtcttctggcaaatacaggtgccgtagtccaggaa
ggaggtagagtattaatcaacaaaacaaatttagatgcttcaaatctactgattaagcta
cctgaggtacagcgcttcatgtatgaagtctggtatcaagttgtatctttaccccaacat
ggcatgattgttgttggagaaagaaacgttaccaaagaaaaacctaacttctcccaatac
atactgaacaaatttggaattgtgtacgtacatgataattcggaatcgcgtagtgacaat
ttcacttttgctgtttggttaaacctaaagagcaagtctgcaacaaagccccatagcgaa
gttttagaggagatgtttaatatcactgttgttccagtgaatgaccaagctccggaattg
aagactaaaaggctgcatttgaaagtcctgcaaggagatgtgtcagtgctagggtccgag
aatctgaaagttgaagacctagataacaccccagctgagctcaaatacaccattgtcagc
aaccccaataatggttatctagcaatgaaaagcaatcttagtgtctctataaaggatttc
acacaagctgatgttgatagtggtaaagtttggtttgtgcaggatggaagttcatcttct
ggggtgttttatttcagtgtgacagatggtaaacatcgccctttgtacaaactattcagt
cttgaagtcataccaatcgctcttgtcctcgtcaaccttaccaatgttgcacttccacag
ggccagacgtctgtcactattactaatatgcagctttcagctgtcacgaatggaaaaagc
acgaatatcatgtatgaaataactcagccactcaaatatggacacctgatgattggaaat
gagcaggttactaaatttgagcagacagatttgtactcaggaaggctgtcttaccacctg
acaaatctcactgcatccagagaagtactggagtttatggtcttcactgcagaaagcaat
ctaacaggacaagtgttgaacatcgcagtgaagcctttagtacaagttgtacctaacatg
cagatttcaaatcaagcagcttataaattcagaagcattgacctggatgcttctgagcta
gccaatttgacaaatagtaatcctaggtttgaagtgatagtgcccccatctcatggaagg
attgtaaagaaaaggttcgtgaatgatactgtgtttgaagatgttcagacattcacccag
gctgacattgatagtggtgttgtgcttctagacatagacacgaatatgacaggcattgat
tctttaaatgactcattcacgtttatactcagggcagatactgtgcagcctgctgttggc
tattttcagtattccattgtgccatacagtccttcacttgtgcaggattttacaactgaa
gtgccttctgtaaccagcacaaccactttaaagatttacactacctcaaaggacgagcca
ccagcctcctctcagaatgcagagcctacagcagcatcacagaagactgtaccaaccatg
tggccagggcagaatggctggggaaatctacatgaggaaggtccattgctaaatctggca
atgggaacaagtgggtctgcggggactaagaccacagcccaggttaatgccaggagtccc
agagagcaggcaggtgaaagcagcaacccttggtacatcattatacccctggtcctggtg
tctgtgctgctcatggttgctgttatttctgtgtgcattttgctaatatgtcagaagaaa
gaaaagacaaaaccgcctgtcaaaagtcaaacagatgcagtcctcagtagtccggatcgg
tgtctggaacggagcttgactatacccagtgttacagtgactcctctcctgaagggggct
gagagaagtacagcctcaacattcatggctgtaagacacgaacagctgcttcccacagtg
gtttctacgactgtagaacggtctcagcaaaacagctggttaagccttgatcctgaaatg
atccagtattgtcggaaaacaaacccagctttgaagcgcaatcaatactgggtgtag
DBGET
integrated database retrieval system
