Charadrius vociferus (killdeer): 104294606
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Entry
104294606 CDS
T08577
Symbol
ZFR
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvf03041
]
104294606 (ZFR)
Spliceosome [BR:
cvf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104294606 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
104294606
NCBI-ProteinID:
XP_009892530
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MRCPAVFRSNLMDRWCQETSDERALCGQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAA
YAPAAAHVSVXXXXXXXSSXPATAAAYGGYPTAHTATDYGYTQRQQEAPPPPPPVTTQNY
QDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAXXXXAQPQPSVAESHYQTAPKAGYSQ
GATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTT
AVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGTTFTKKAPFQN
KQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNTNNSSTSAR
GTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVTQATSSTS
TSASKPTASASNIATSSSTVNSSVASSAVKILTPTANTPLNTASNNKTSSTAANIAVKKI
STPKINFVGGNKLQTTGSKLEEMKSAESVKTTPAATVQTQEVKPDTAAEPVTPTTLAALQ
SDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHRLQYKKKVNPDL
QVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEEDMYWRRMEEEQHHW
DDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSDDRYVMTKHAAIYPTE
EELQAVQKIVSITERALKLVSDNMTDHEKSKSKEGDDKKDGSKDRALKGVLRVGVLAKGL
LLRGDRNVNLVLLCAEKPSKTLLSRIAESLPKQLAVISPEKYDIKCAVPEAAIILNSCVE
PKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAALRHAKWFQARANG
LQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFECISSG
IILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQIHKVLGMDPLPQM
NQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcccagcggtttttcggagcaacctgatggaccgctggtgccaagaaacttca
gatgagcgggccctgtgcggccagcagccagcttcgggtgtagcctattcccatccaact
acagttgctagttacactgtccaccaggcaccagtcgctgcgcacaccgttactgcagcc
tatgctccagcagcagctcacgtttcagtgnnnnnnnnnnnnnnnnnnnnntccagcncc
cctgccacagctgctgcgtatggaggctatcctacagcacacacagctacagattatggt
tatacgcagaggcaacaagaggctccaccaccaccgccgcctgttacaacacagaattac
caggattcctattcttatgttcgatctacagccccagctgtagcttatgacagcaaacaa
tactatcaacagccaacagcaactgcggcggctgtggctgctnnnnnnnnnnntgcccag
cctcagccttcagtagctgaatcgcactaccagacagctccaaaagcaggatatagccaa
ggggcaactcagtatacccaagcccagcaaacacgacaagtgacagctataaaacctgca
accccaagtccagcaacaactacattttctatatatccagtatcctctactgtgcagcca
gtagcagctgcagctactgttgttccatcctacactcaaagtgcaacgtacagtacaaca
gcggttacttactctggtacctcttattccggctatgaagccgcagtgtattcagctgca
tcgtcctattaccagcagcaacagcagcaacagaaacaggcagcagcagcagctgctgct
gctgctgcaacagctgcttggacagggaccacctttactaaaaaggcaccattccaaaat
aagcaactgaaaccaaaacaacctcccaaaccgccccagatccactactgtgatgtttgt
aagatcagctgtgctggaccacagacatataaagaacacttagaaggccagaaacacaaa
aagaaagaagcagcattaaaagcttcccagaacaccaataacagcagcacttctgctcgt
ggaactcagaatcagttgcgctgtgagctttgtgatgtgtcttgtacaggagcagatgct
tatgctgcccatatccgtggagccaagcatcagaaagtagtaaagttgcacacaaaactt
ggcaaacccattccttcaactgaaccaaacgtggttacccaagctacttcctcaacctcc
acatctgcttccaaaccaactgcctcagcttcaaatatagcaactagcagcagtactgtg
aactcctctgttgcatcctctgcagtgaaaattcttactcccacggcaaatacaccactt
aacactgcgtccaacaacaaaacatcttcaaccgctgctaatatagctgtaaagaaaata
tctacaccgaaaataaactttgttggtggcaataagcttcagacaacaggaagtaaactg
gaagaaatgaaatcagctgaaagtgttaaaacaactcctgctgctacagtacaaacacag
gaagtaaaaccagacacagcagctgaaccagtgactccgacaactcttgctgccttgcaa
agtgatgtccagccagtgggccatgactatgtggaggaggtaagaaatgatgaaggaaag
gtgatccgctttcactgtaaactttgtgagtgcagttttaatgatcctaatgccaaggag
atgcacttgaaagggaggcggcacagacttcagtataagaaaaaagtaaacccagactta
caagtagaagtaaagcccagtattcgagcaagaaaaattcaagaagagaagatgaggaaa
cagatgcagaaagaagagtactggagaaggcgagaagaggaggaacgctggaggatggaa
atgaggcggtacgaagaggacatgtactggaggagaatggaggaagagcagcatcactgg
gatgaccgtcgcagaataccagatggaggatatcctcatggtcctccaggacctctaggc
ctgctgggagttagaccagggatgcctcctcagccccaaggaccagctcctctgcgccgc
cctgactcctctgatgaccgctatgtgatgaccaaacatgcagctatatatccaacagag
gaggaacttcaagcagtccaaaaaattgtttctattactgagcgtgctttgaaacttgtt
tctgacaatatgactgaccatgaaaaaagcaagagcaaagagggagatgacaaaaaagat
ggcagtaaagacagagctttgaaaggagtcttacgggtaggcgttttggctaaaggtttg
ctactccgtggagaccgaaacgtgaatcttgttttgttatgtgctgagaagccttcaaag
acattactcagtcgtattgctgaaagtcttcccaaacaacttgcagtaataagtcctgag
aaatacgatatcaagtgtgcagtcccagaagcagcaataattttaaattcatgtgtggaa
cccaaaatgcaagtcactatcacactgacatctccagtcattcgggaggagaacatgagg
gatggagatgtaacctcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaa
tgccttgacgctctggctgctctacgccacgctaagtggttccaggctagagctaatggt
ctgcagtcctgtgtgattatcatacgtattcttcgtgacctctgtcagcgggttccaact
tggtctgattttccaagctgggctatggagttgcttgtggaaaaagcaattagcagcgct
actggaccacagagtcctggggatgcattgagaagagtttttgagtgtatatcttcagga
atcatccttaaaggtggtcctggccttctggacccttgtgaaaaagatccttttgatacg
cttgctgtaatgacagatcagcaacgagaggatattacttcaagtgcacaatttgcactg
agactccttgcattccgtcaaatacacaaagttttaggaatggatccgttaccacagatg
aatcaacgcttcaacatccataataatcgtaaaaggagaagggacagtgatggggttgat
ggatttgaagcagagggaaaaaaagacaaaaaagattatgataacttttaa
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