Charadrius vociferus (killdeer): 104294619
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Entry
104294619 CDS
T08577
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03410
Base excision repair
cvf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104294619 (POLL)
03450 Non-homologous end-joining
104294619 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104294619 (POLL)
Enzymes [BR:
cvf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104294619 (POLL)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104294619 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
104294619 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
LIG3_BRCT
HHH_5
PTCB-BRCT
NTP_transf_2
HHH
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
104294619
NCBI-ProteinID:
XP_009892544
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MEPRGIVKAFPKRKKVRDDSGKSVPPKIPKEEGTEIHEAEWLKPVTAYVLQAGIGQARVE
IFHKQIVQNGGVVHNQLSSEVTHIVVAEDMDCDRAFRLLKLTKLPSGLQLVKASWLSACI
RDQKLLSTAGYVVSIPRRHLIHDRYLEEGELQKKEQQQVLGIKEIQPPAEEGAVKPNTEA
EVGNSLQQGLGTLGQQQLAEKVSDDEDSEGEDASVTQGDLEALISGCYPVKSSEETSDSS
STVAQPTSKWVCAHSSNSKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSY
HKPVTSYQEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTA
QMWYQQGFRTLDDIRTKATLTSQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPG
LVCVACGSYRRGKPTCGDVDVLVTHPDGQSHRGVFGKLLDSLHRSGFLTDDLVSQEDNGD
QKKYLGVCRLPGPAQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSE
HALSSAVVRGPGGVKVASGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgagggattgtcaaagcctttcccaagaggaagaaggtgagggatgactca
gggaaaagtgtccctccaaagatcccaaaagaggaaggaacagagatacatgaggcagag
tggctgaaaccagtcactgcctacgtgttgcaagctggcatcggccaagccagggtggag
atcttccacaagcagattgtccagaatgggggtgttgtacacaaccagctctcctcagag
gtgacacacatcgttgtggctgaagacatggactgtgatcgggcctttcggctccttaaa
ttaaccaagctgccttcaggattgcagctagtgaaggcatcctggctaagtgcttgcatc
agagaccagaagctgctgagtaccgctggctatgttgtctctatccctcgcaggcatctg
atccatgacaggtacctggaagagggagaactgcagaagaaagagcagcagcaggtcctg
ggcattaaagagatccagcccccagcagaggagggagcggtgaaaccaaatactgaagca
gaagttgggaattccttgcagcaaggcctgggcacccttggacagcagcagctggctgag
aaagtctctgacgatgaagacagtgaaggagaagatgctagtgtcacccagggagatctg
gaagcattgatttctggatgctaccctgtgaaatcatcagaggagaccagtgacagctct
tccacggtggcccagcctaccagcaagtgggtttgtgcccattcctccaacagcaagaag
gagaaccacaaccagtgcattacagagaagctggaagtgctggcaaaagcctattctgtc
cagggggacaagtggagagctctgggctactccaaagccatcaatgcactcaagagctac
cacaaaccagtcacctcctaccaggaagcctgtaaaatccctggcattgggaagcgaatg
gcggagaagatcctggagatcttggagagtgggcatctgcgcaagctggatcacatcagt
gagagtgtgcctgtgctggagttgttttccaacatctggggagcaggggtcaagacagct
cagatgtggtaccagcagggtttccggacactggatgatatccgcaccaaggcgactctc
accagccagcaagctgtgggcctgaagcactacacagatttcctggagcgcatgcctcgg
gaggaagctgcagagatagaacagaccgtcagacaagctgcccttgccctgaagcctggg
ctcgtgtgtgtggcatgtggctcctaccgtcgggggaaacccacctgtggagatgtggat
gtgctggtcactcacccagatggacaatctcaccgtggggtgttcggcaagctgcttgac
agcctccacaggagcggcttccttacggatgacttggtgagtcaggaggacaacggagat
cagaagaagtacctgggggtgtgccgcctccccgggccagcccagcgtcaccgccggctt
gacatcattgtggtgccttacagtgagtttgcctgcgccctgctttacttcactggctcg
gctcacttcaaccgctccatgcgagccctggccaagaccaagggcatgagcctctcggag
catgccctcagctcagctgtggtgcgaggccctgggggcgtcaaggtggcatctggccat
actctgcccacccctacagagagagatgtcttcattcagctggggctgccttaccgggag
ccctcagaacgggactggtga
DBGET
integrated database retrieval system
