Charadrius vociferus (killdeer): 104294813
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Entry
104294813 CDS
T08577
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104294813 (KATNB1)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104294813 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_EIPR1
eIF2A
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
PROPPIN
RMC1_N
VPS8_N
WDR54
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104294813
NCBI-ProteinID:
XP_009892770
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAVAVTTKTAWKLQEITAHSTNVSSLVLGKSSGRLLATGGDDCRVNVWSVNKPNCIMSLT
GHTTPIESLQINTNEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPFGSFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTEAVRCLRFSPDGKWLASAADDHTVKLWDLAAGK
IMFEFTGHTGPVNVVEFHPNEYLLASGSFDRTVRFWDLEKFQVVSCIEEEATPVRCLLFN
PDGCCLYSGFQDSLRVYGWEPERCFDVVLVNWGKVADLSICNNQLIGVSFAQSTVSSFVV
DLSRVTKSGSIPHGLMRDDEPLVPPTPTGSSLRRIYDRPSTSCSKPQSRVKHNSESERRS
PSSEDDRDEKESKAEIQNPEDYKEIFQPKNAICRTPPRNNEPFPAPLEDEPVTAKEAVKP
SQAVDVQTPLPKQELPDPVQRPPIASSTPLHRTEPSVIPAARNEPIGLKVSDFLPAVKNQ
SQTELVDEEAMSQIRKGHETMCVVLTSRHKNLDTVRAVWSTSDIKNSVDSAVAINDLSVV
VDLLNIVNQKASLWKLDLCTIVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDIL
AAPPSVGVDITREERLHKCKLCYKQLKNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggccgtcaccactaagacggcatggaagctgcaagagatcacggctcacagc
accaatgtgtcctcactagtcctggggaaaagttcgggccggctgctggcaactggagga
gatgactgtcgggtcaacgtatggtcagttaacaagcccaactgcatcatgagcttgaca
ggccatacaacacccattgagagcctacagatcaatacgaatgaggaactcattgttgca
gggtcccagtcagggtccattcgagtttgggacctggaagctgccaaaattcttcgtacc
ttactcggtcacaaagcgaatatctgcagccttgatttccatccttttggaagctttgtg
gcatctggctctttggacacaaacattaagctctgggatgtaagaagaaaaggctgtgtc
ttcaggtacaagggccacacagaagcagttcgatgtctccgctttagtcctgatgggaaa
tggttagcctctgctgctgatgatcacactgtaaagctgtgggatctggctgctgggaag
ataatgtttgagtttacaggacataccggcccagtaaatgttgttgaattccatcccaat
gaataccttttggcttctggcagttttgacaggactgttcggttctgggacttggagaag
tttcaggttgtgagctgtattgaagaagaggctactcctgtcaggtgtctgctcttcaac
ccagatggctgctgcttgtatagtggcttccaggattcactgcgtgtgtatggctgggag
ccagagcgctgttttgatgtagtcttggtgaactggggaaaagttgccgacttatctatc
tgcaataaccagctgataggagtttcctttgcgcaaagcacagtctcctccttcgttgtg
gatctcagcagagtcacaaagtcgggttccattcctcatgggctgatgagggatgatgag
cctctcgtgccacctacccccacagggtcctcccttcgccgcatctatgacaggccctca
actagctgcagcaagccccaaagcagagtgaagcacaactcggagagcgagaggcgcagt
cccagcagtgaagatgaccgtgatgagaaggaatcaaaggctgagattcagaacccggag
gattacaaagagatcttccagcccaagaacgctatctgtcgaactcctcctcgaaacaat
gagccctttcctgcccctctggaggatgagcctgtaactgcaaaggaagcagtgaagccc
agccaagctgtggatgtccagaccccgttgccaaagcaagaacttcctgatccagttcag
aggccaccaattgcctcctcaactcccttgcacagaacagagccatcagtgattcctgca
gccaggaatgagcccatcggcctgaaggtttctgactttctaccagctgtgaaaaaccaa
agccagactgagctcgtggacgaggaagccatgtcccagatcaggaaaggccacgagacc
atgtgtgtggtactcaccagccgccacaagaatctggacaccgtgcgggctgtatggagc
accagtgacatcaagaactctgtggactctgcagtggcgatcaacgatctgtctgttgtt
gtggacctcttgaatattgtcaaccaaaaagcgtctctctggaagctggatttgtgtact
atagtcctgccgcagatagagaaactactccaaagtaaatacgaaagttacgtgcagact
ggctgcacctctctgaaactcattctccagagattcctgccactgatcacagatatcctc
gctgcaccaccttctgtcggagtggacatcaccagagaggaaaggctccataaatgtaag
ctgtgctacaagcagctgaaaaacatcagcaacattgtcaagaacaagtctgggctcagc
ggccgccatggtagtgcctttcgggaactgcatctcctcatggctgtcctggagtga
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