Charadrius vociferus (killdeer): 104294982
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Entry
104294982 CDS
T08577
Symbol
NIPBL
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104294982 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104294982 (NIPBL)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104294982 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
104294982
NCBI-ProteinID:
XP_009892980
LinkDB
All DBs
Position
Unknown
AA seq
2787 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTPHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGTLKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEHTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGTITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPQEAGGATGGSRAASQETGSAGNGSRPA
LMVSIDLQQXRVDSQATVTQDLDTIKKPEEIKQYNDGFVCIPQEDTVGVLKFKPENHPEI
FRKKSDFEGQKMDIQQNENRQMEFQQNESRRLESKHNENKQLEAKHESKYESRRTNSRQM
EVKHNENRQTESKQNQSRQLEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEG
RPETPKHRHDNRRDSSKPLSDKRIEISRHKLDVKSDPSRVKPESRSDPTKQRPDGRSVSD
TPRRDHDSLKQRSEDREESERYRGDPSKIRRPEYLRSSNKNEHDSKHDIKSDGSKIEKFE
RKYRHESGESRERFSSGDQKSRPDSPRIKPEGKGDSSKSRPDKPGFKSPNSKDERRTDGN
KSKVDSNKAHADNKAEFPSYLLGARSGALKHFVIPKIKRDKDGSVTQESRKTEFRGEQKD
KVEKIGLVEDLNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKSNKGSI
DQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESS
RKRHKKERDEAWEYEEHDKRSAGDHRRSGHYHEGRRPSGSGRYRNRSPDDSDMEDYSPPP
SLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGD
DDEIPQELLLGKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLL
NHNNDTEDEERLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFH
LQNTLYPQYDPVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEI
QLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARL
PTSKRSLRNFRLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSSAEEESNKKVDQ
DVLITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAEL
LLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSG
GEDEIQQLQKALLDYLDENTETDASLVFSRKFYIAQWFRDTTMETEKAIKSQKDEDSSEG
AHHAKDVETTGQIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASM
RPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDN
STSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFP
KITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDT
GYDWFEQLLQNLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLV
ACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSE
TFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKSQ
HQEDPNSTILTANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKH
SDEEVQTKAIIGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQE
EDTRMQQADRDWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALN
VIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKM
SYQVQQAINTCPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKT
EVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPS
SDEETESDSNSGSESESEEEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEF
ANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDF
LRSDMANSKITEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGG
GSPKNNAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPK
YKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIA
LTSANKLTNKVVQTLRLLYAAKDGTSS
NT seq
8364 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctacaacaacaaaaagcctg
cttttcaacggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagctcgtccacagtctcaatcaggtgtcaacagatcacatagagttgaaa
gataaccttggcagtgatgatccagagggagatataccagtcttgctgcaggctatcctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacaccacatcct
cagatgcagcaagcttcagtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcagttgtctggaaactcagctaatcatcatgctgataattct
agacatggctcaaatgaagactacctacagatggtgcacaggctaagtagtgatgatggc
gatccttcaataaggaatgctgcatctttttccttgaggtcaccacagtcagtctgctct
ccagctggaagtgatggaacccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagttctccttccaaggactccactaagcttacatta
agactctctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccattaaacgctgctcagtgtttg
ccgcagcatgaacatacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggaactataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataaacctctgaagaagcgaaaacaagaaaacaaaccacaggaggctggaggtgctaca
ggaggaagtagagcagcttctcaggagacgggttctgcaggaaatgggtcgaggccagcg
ttgatggttagtattgatctgcagcaanngcgagtggactctcaggcaacagtaactcag
gatttggacactatcaaaaaacctgaagaaattaagcagtataacgacgggtttgtgtgc
attccccaagaagacactgttggagttcttaaatttaaacctgaaaaccatcccgagatt
tttaggaaaaagtcagactttgagggtcaaaagatggatatccagcaaaatgaaaacaga
caaatggaattccagcaaaatgagagcagacggttggaaagtaaacacaatgagaacaaa
cagttagaagctaaacatgaaagcaagtatgaaagcaggagaacaaacagcagacaaatg
gaagtgaaacacaatgagaacagacagacagaatcaaaacaaaaccagagcaggcaactg
gagatgaaacaaaatgagggaaaacagaataatggcaaacaggaaataaggcagaggccc
gaaacgccaaaacagaagagtgaaggcaggcccgaaacgccaaaacagaagagtgaaggc
aggcccgaaacgccaaaacatagacatgataataggagggactccagtaaaccattgtca
gataagagaattgaaatatctaggcataaactagatgtgaaatctgatccttcaagggta
aaacctgaaagtagatccgatccaacaaagcaaaggcctgatgggcgttcagtttctgat
acaccaaggcgtgaccatgatagccttaaacaaagatctgaggacagggaggagtcagag
agatacagaggagatccatccaagattagaaggcctgaatatttgagatcctcaaacaaa
aatgaacatgattctaagcatgatattaaatctgatggttcaaaaattgagaaatttgaa
aggaaatatagacatgagtctggtgaatcaagggaaaggttttcttctggggatcagaaa
tcaagacctgacagccctcgcattaaaccagaaggtaaaggagattctagtaaatcaaga
cctgataaacctggttttaaatcacccaacagcaaggatgaacgaaggacagatggtaat
aagagtaaagtagatagtaataaagcacatgctgacaataaagcagagtttcccagttat
ttgttgggggcaagatctggcgcattgaaacattttgtcattccaaaaatcaagcgtgat
aaagatggcagtgttactcaggagtcaaggaaaactgaatttagaggtgaacagaaggac
aaagtagagaagattgggctagttgaagatttaaataaaggagctaagcctgtagttgtc
cttcaaaagctttctttggatgatgtgcagaaatttattaaggatagagaagataaatca
aggggctcttgttttaaacctaacaagaacaagtcatccaaatctaataaaggtagcata
gatcagtcagtgttaaaggagttgcctccagagctcctggcagaaattgaatccaccatg
ccactttgtgaacgtgtgaaaatgaacaagcgcaaacgtagcacagttaatgagaaacca
aaatatgctgaaatcagctctgatgaagacaatgacagtgaagaagcttttgaatcttct
cgtaaaagacacaaaaaggagagagatgaagcttgggagtatgaagaacatgacaaaaga
agtgctggtgaccataggagaagtggtcactatcatgaaggaaggaggccttctggtagt
ggccgttaccgtaatcgcagtcctgatgactctgatatggaggattattctcctccccct
agcctcagtgaagtggctagaaaaatgaagaaaaaagaaaaacaaaagaagaggaaagct
tatgaacctaaactaacacctgaagaaatgatggattcttcgactttcaaaaggtttact
gcttcaatagagaatattttggaaaatttggaagacatggattttacagcttttggtgat
gatgatgagattccacaggaattgctactgggaaaacatcagcttagtgagttgggtagt
gaatctgcaaaaatcaaggcaatgggcattatggacaagctctcaacagataaaacagta
aaagtcctgaatattttggagaagaatattcaagatggatcaaagctttctacattactt
aaccataacaatgacactgaagatgaggagaggttatggagagatcttattatggaaaga
gtaacaaaatctgctgatgcttgtcttactgctatcaatatcatgacgtcaccaaatatg
cctaaagctgtatatattgaggacgtaatagaaagagttattcaatacacaaaatttcat
ttgcagaatactctctatcctcagtatgatcctgtgtatagagtggatcctcatggtggt
ggtgttttaagttcaaaagcaaaacgtgccaagtgttccacccacaagcaaagagttata
gtaatgttgtataacaaagtttgtgacattgtcagcagcttgtctgagttgctagagata
cagcttcttactgatacaactattcttcaggtatcatctatgggaataacacctttcttt
gtagaaaatgtcagtgaactacagttatgtgccatcaaattagtgactgcggtgttctcc
agatatgaaaaacatagacagttaatactagaagaaattttcacttcccttgcgagacta
ccaactagcaagaggagtttaagaaacttcaggttaaacagcagtgacaccgatggagag
cctatgtacattcagatggtaacagcactagttctgcagcttattcagtgtgtggtgcac
ttaccatcagcagaaaaagattctagtgcagaggaggagtcaaacaagaaagtggatcaa
gatgtgcttattactaactcatatgaaacagccatgagaacagcacaaaacttcctttct
attttcctgaagaagtgtggcagtaaacaaggggaagaagattacaggccactgtttgag
aacttcattcaagatcttctttccacagtcaataaaccagaatggccagctgcagagttg
ctacttagcttattaggaaggctattggttcaccagttcagtaacaaatctacagaaatg
gcattaagagttgcatcacttgactatcttggaactgtagctgcaagactcaggaaagat
gcagtcactagcaaaatggatcaaggatctatagccagaatcctcaaacaggtttcagga
ggagaagatgaaattcagcagctgcaaaaggctttgctagactatctggatgagaacaca
gaaaccgatgcatcattagtgttttctcggaagttttacatagctcagtggttccgtgat
actactatggagacagagaaagcaattaaatctcagaaggatgaggattcatctgaagga
gctcatcatgcaaaagatgttgagaccacaggacaaatcatgcatagagcagaaagtcgt
aaaaagtttcttcgcagcatcattaaaactgctccatctcaattcagtacattaaagatg
aattctgatactgtggactatgaagatgcatgtttgattgttcgctacttggcctctatg
aggccgtttgcccagagcttcgatatttatttgacacagattctgcgtgtacttggtgaa
aatgcaattgctgttcgaacaaaagccatgaagtgtttgtctgaggttgttgctgtagac
cccagtattctagcaaggctggatatgcaacgaggtgttcatggacggttaatggataac
tccactagtgtacgagaagcagctgtggaactgcttggccgatttgtgctctgtcgtcct
cagcttgctgagcagtattatgacatgctgattgaaagaatattggatactggtatcagt
gtcagaaaaagagtcataaagatccttagggacatctgcattgaacagccaacatttccc
aaaataacagagatgtgtgtgaaaatgattcggagagtcaatgatgaagaaggcattaag
aaattagtaaatgagacattccagaagctctggtttactccaactccacaccatgacaaa
gaagcaatgacaaggaaaatattaaacatcactgatgtggttgcagcttgtagagacaca
gggtatgattggtttgaacagcttcttcaaaatctgttgaagtcagaagaggatgcctca
tataaacctgtgaagaaagcctgtactcaacttgttgacaatttggttgagcacattctt
aaatatgaggaatctttatcagattctgacaacaaaggtgtgaattctggtcgcttggtt
gcttgcataaccactttgttcttattcagcaaaatcaggccgcagctaatggtcaaacat
gccatgaccatgcagccatacctgaccactaaatgcagtactcagaatgatttcatggtg
atctgcaatgttgcaaaaattttagagcttgtagtgccgctaatggagcacccaagtgaa
acctttcttgccacaattgaggaagacctcatgaaactcatcatcaaatatggcatgacg
gttgttcagcattgtgtgagctgtcttggggctgttgtgaacaaggttacccagaactat
aaatttgtgtgggcctgctttaatagatactatggtgcactttcaaaattaaaaagtcaa
caccaagaagaccccaacagtacaatacttactgccaataaaccagcactccttagatca
cttttcactgttggagcactgtgtcggcattttgattttgatcaggaagattttaagggc
aacagtaaggttaacattaaggataaagtacttgaactgctgatgtattttacaaagcat
tcagatgaagaagtacagacaaaagccattattggccttggatttgcatttatacaacac
ccaagtttaatgtttgaacaggaagtgaagactctgtacaacagcattctttcagataag
aactgttcagtaaacttaaaaatccaggtgttaaaaaacctccagacctacctgcaggag
gaggatacacgtatgcagcaggcagacagagactggaaaaaagtagcgaagcaggaagac
ctgaaagaaatgggtgatatttcctcagggatgagcagttccatcatgcagctatatctc
aaacaggtccttgaggctttctttcatacccagtccagtgtacgtcactttgctctaaat
gtcattgcactgacgttaaaccagggtctcatccatcctgttcagtgtgtgccatactta
attgctatgggcacagatccagagccctctatgcgaaacaaagctgaccagcagttggtg
gaaatagacaaaaaatatgctgggttcattcacatgaaagcagtggctggtatgaagatg
tcttaccaggtgcaacaggcaattaatacctgcccaaaagatcctgtaagaggttttaga
catgatgaatcatccagtgcattgtgttcacacctgtactccatgatccgagggaaccgt
caacacagacgagcgtttctaatttctttactcaacctttttgatgatactgcaaaaaca
gaggtgaatatgctcttgtacatagcagacaatctagcctgttttccttatcaaacacag
gaagagccactgtttataatgcatcatatagacatcacactatcagtttctggtagcaac
ctactacagtcctttaaagagtctatggtgaaagacaaaaaaaaggaaagaaagccttca
tcagacgaggagactgagagtgacagtaacagtggtagtgagagtgaaagcgaggaggaa
gcttctaagcctcggaggttacggaaacgagtagactctgattcagattctgatgaagaa
aatgacataaatgctgtgatgaaatgtttaccagaaaattcagctcctttaattgaattt
gcaaatgtctcccaaggcatattattactgttgatgctgaaacagcatttaaagaacctc
tgtggattctctgacagtaaaattcagaaatactctccatctgaatctgcaaaagtttat
gataaagcgataaacaggaagacaggagttcatttccatccaaaacaaactctggatttt
ctgcggagtgatatggctaattccaagatcactgaagaagtgaagaggagtatagtaaaa
cagtatttagatttcaagctccttatggaacatttggatcctgatgaagaggaagaagat
ggagaggtgtcagctagcacaaatgctcggaacaaagcaattacctcgctgcttggagga
ggcagccctaaaaacaatgcagctgagacagaggacgatgaaagtgatggggaggataga
ggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagactctacggagttg
gcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatttgctgtccaaag
tacaaagaccgaccacaaattgcaagagtagtacagaaaaccagcaatggcttcagtgtt
cagtggatggcaggctcctacagtggctcctggactgaggctaagcgccgtgatggccgc
aaactggtgccttgggtagacactattaaagagtcagacattatttacaaaaaaattgct
ctaacgagtgctaataagctgactaataaagttgttcagactttacgattgctgtatgct
gccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
