Charadrius vociferus (killdeer): 104295181
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Entry
104295181 CDS
T08577
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104295181 (SCAF4)
03041 Spliceosome [BR:
cvf03041
]
104295181 (SCAF4)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104295181 (SCAF4)
Spliceosome [BR:
cvf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104295181 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104295181
NCBI-ProteinID:
XP_009893195
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSATAPMTENATNNEGSPPPPAKVSSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKAAFPPPEQKT
SFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPAFGFPGEGIQQPVFPQLPNMDAFQ
QRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPPTAPVQQTFQSPFPVQS
ESHMQKPHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRS
RSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVCSTTLWVGQLDKRTTQQ
DVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNFKVNQKSIKIAWALN
KGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSPEWKGIPKKSENEVA
QNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGPPVVGALQPPAFTAP
LGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSVPHTPAVNIPNS
TATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYATVPPPVAPTNVPAPVTQAIP
LLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPPPPLRRFPLMPPRHMPPH
MMHRGPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGGPGGPEDNRDGRQFRNDRQ
TFTPNRDQERYGRRSFGNRVENDRERYGNRNDDRDHERLGNRDRRDWGRRSPERDRHRDL
EDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKPEMTDRADGDKNHESHSGKMEDADIV
SELPAGESEPTGVKPVEELPSEATSSVEQAEKDMGSAAEAPR
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacctcctatttcccgagcaaaaatgattctcatcacaaaagctgccatt
aaagctattaagctctacaagcatgttgtccagattgtagagaagtttatcaaaaagtgc
aaaccggaatataaagtccctggattgtacgttattgactctattgttcgtcagtctcgt
caccagtttggaacggacaaagatgtttttgggccaagattctctaaaaatattactgcc
acattccagtatttgtatctctgtccatctgaagacaagagtaaaatagtccgtgtcctg
aacctatggcagaaaaatggagtatttaaaattgaaataattcaacctcttctggatatg
gcagcaggaactagtgccactgcaccaatgacagaaaatgctaccaataatgaaggttca
ccaccccctccagcaaaggtgtcttcggagccccctcaagttactgctaactcagtacct
actgtgccacagttgcccagttctgatgcctttgcagctgtagctcagttgtttcaaacg
acgcaaggacagcagcttcagcaaattcttcagacttttcaacagcctcaaaaaccccag
tcaccggtcatagataacactgtgatggctcaggttcaagctattactgctcagttgaaa
actacagcagcacaaccaccagaacaaaaagctgctttcccaccgcctgagcaaaaaaca
tcatttgacaaaaagctgctagatcgttttgactatgatgatgaacctgaagcagtagaa
gattcaaagaaagaagattcagctccttccccttcagtttctcagcctgcttttggattt
ccaggagaaggtatacaacagccagtatttcctcaactcccaaatatggatgcttttcag
cagcgaatgatggggatacaacaggatccaatgcgtcaccaggttccgcttcctcctaat
gggcaaatgccaggttttggtctcctgcctaccccacagtttccacccatggctcagccc
gtgattccgccaacagcacctgtgcagcaaacttttcagtctccttttccagtacagagt
gaatcacacatgcaaaaaccacatcagcaggatatggaagtggaacagccacctattcaa
gagggaaaacggcatgtttctgacaacagaaagtcaagatctaggtctgcgtcaaggtca
cctaaaaggagacgttcaagatctggctcccgatctcgaaggtcacgtcatcgtcgatct
cgatctcggtccagggatagacgccgacactctcctaagtctcggtcacaagaaagacgt
gaacgtgagagggagagagaacgcaggtcaaaaggccttccacagatcaagtcagagact
gttagtgtttgtagtactacactttgggtaggacaacttgacaaaaggacaactcaacag
gatgttggaagtcttttggaggagtttggcccaattgaatcaataaatatgattccgcct
agaggatgtgcctatattgtaatggttcacaggcaagatgcttaccgtgccctacaaaaa
ctgagccgaggaaacttcaaagtcaatcagaaatctataaagattgcatgggctttgaat
aaaggaataaagccagattacaagcagtattgggatgtagaattaggtgttacttacata
ccatgggacaaagtgaaacctgaagatcttgaaagtttctgcgaaggaggaatgttggat
aatgagactcttagtccagagtggaaggggattcccaagaagtctgaaaatgaagtagct
caaaatggaggtgcagaagctacgcataatgaaccagtgtcacctatacctaaagcttta
cctgttccaattcccgttcccatgcctgcaccaataacagtacctcctccacaggttcca
ccgcatccatcaggtcctcctgtggttggtgcactgcaaccacctgctttcacagcacct
ttaggaatcccacctcctggatttgctcctggtgtaccgccaccaccgccgcctccattt
ttacgacctggtttcaacccaatgcatttacccccaggctttcttcctcctgggccacca
ccacctataactcctccagtatctgttcctcacactccggcagtgaacatcccaaactct
acagcaactggtgtgaatgaagacactacgaaagattcatctgtaggaaatcctatccca
acggtggtttctggatccagagggaatgctgaaactaccgatagttccaaaatatatgcg
actgttccacctcctgtagcacctactaatgtacctgctcctgtcacccaagctattcca
cttcttggcactcagggagtcgcgccccccccgccagcccctgttgtcgggttgcagact
ccatccaccggcctcttgggtgcccggcctggtttgataccactccagcgaccgccggga
atgccgccccctcctctgcggcggtttcccttgatgccaccgcgacacatgcctccccac
atgatgcacagagggcccccgccggggccggggggcttcgggatgcctcctccccatgga
atgaaaactcctttcccaccaccgggtcactttgtgagacccggagggatgccgggaagc
ggggggccgggcggacccgaggataacagagatgggaggcagtttaggaacgacaggcag
acgttcacgcctaacagagaccaggaaaggtatggcaggagatcttttggaaatcgggta
gaaaacgatcgtgagcgctacggtaaccgcaacgatgacagagatcacgagcgactcggt
aatcgtgacaggcgagactggggacgaagaagccccgagcgcgatagacacagagacttg
gaggacagaaacaggcggtccagtggccatcgagacagagagagagattcgcgagacagg
gagtctcgcagagacaaggaagaaaatcgaggcaaggaaaaaccggagatgacagacagg
gcagatggcgacaaaaaccatgaatctcatagcggcaaaatggaagatgcagacattgtt
tcagaacttcccgcgggagagtctgaacctacaggtgtaaaacctgtggaagagttacca
tccgaggctacctcatctgtggaacaggcggaaaaggatatgggctcagcggcggaggct
cctcgctag
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