Charadrius vociferus (killdeer): 104295188
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Entry
104295188 CDS
T08577
Symbol
USP16
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104295188 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvf01002
]
104295188 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104295188 (USP16)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104295188 (USP16)
Peptidases and inhibitors [BR:
cvf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104295188 (USP16)
Ubiquitin system [BR:
cvf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104295188 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
104295188
NCBI-ProteinID:
XP_009893203
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MGKKRIKGKTAQSDESPDTLEPLCKHIRKGLEQGHLKKALLNVEWHVCQDCKADNKTQEK
SEEETDESPSIWLCLKCGHRGCGRNSQEQHALKHYTTPRSDPHCLVLSLDNWSVWCYICD
NEVPYNTSTRLGQTVDYIRKQVCTDSSRTVEKQQENKEFENKKVEKDNKNEQEKEVSLKE
ENSHSSANSEVTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPGTTVKIDSPELS
MEPQLIKLDQPGPLTLAMYQFLTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHEL
LRYLLDGMRAEEIQQISVGILKALTDSNKQNEEELKKKIKEYEKKKGIQSFVDRIFGGEL
TSTIMCVXCRTVSLVHESFLDLSLPVLDDQKVKTTNERNVKKNKEKESEDEEDKNNDCYL
KQRDEPPGTSKHLQKKAKKQAKKQAKSQRRQQKLQGKVLHLTDICATEPSEKDVEYNQES
ETEINSETPDMKQEVESSNDCKDQCLTQKDLSIEGNSTEVQSTRENIGKPEQEGVEKESL
MDLPMEGLDSSTTVVNGLDNLSLKDEDVENEDEEELATDFSKLHLGANAESDTSTLEDLQ
SVPIKTCEVSTEDPETAFCTLANRDDLNPEEGSIYHCLYQFTRNEKLTETNKLLCDVCTQ
RHYGPKKNIKSEKKYVYTDAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNRHIKFPEVI
DLAPFCTVKCKNVAEGNTKVLYSLYGVVEHSGTMRFGHYTAYAKMRSMNNHLSDLVLRGQ
SPQASETETVKGQWFHISDTHVQAVSASKVLSSQAYLLFYERLL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacgcatcaaaggcaaaactgcacagtctgatgagtctccggatacgctg
gaacctctgtgcaagcatattcgtaaaggactggaacaaggtcatctgaaaaaggcactg
ctgaatgtggaatggcatgtttgtcaggactgcaaggcagacaataagacacaagagaaa
tctgaggaggagactgacgaaagcccttcgatatggttatgtctaaaatgtggccatagg
ggctgtggcagaaattctcaagaacagcatgctttaaagcattatacaacgccgagatca
gatccccattgtttggttctcagtttggacaactggagtgtgtggtgctacatatgcgat
aatgaagtcccatataatacttcaacacgattgggtcagactgtggattatattagaaaa
caagtttgtactgactcatcacgtacagtagaaaaacaacaagagaacaaagaatttgaa
aataaaaaagtagaaaaagacaacaaaaatgagcaagaaaaagaagtctcacttaaagaa
gagaattctcattcaagtgctaactcagaagtgactgtgaaaggacttagtaacttgggg
aatacatgtttctttaatgcagtgatgcagaatttatcacaaactccagtcctgagggag
ctgcttaaagaagctaaaatgcctggcacaacagttaaaattgattcacctgagttatcc
atggaacctcagctgataaagctagatcagccaggtcctttgacattagccatgtatcag
ttcctgacagaaatgcaagagacaaaaaaaggggtagtcactcctaaggaactttttgct
caggtttgtaaaaaagccatacgatttaaaggttatcagcagcaagacagtcacgaattg
cttcgttacttacttgatggaatgagagcagaagaaatccaacaaataagtgttggaata
ctgaaggcgctgactgactctaacaaacaaaatgaagaagaacttaaaaagaaaattaaa
gaatatgagaagaaaaagggaatacaaagttttgtagatcgcatctttggtggagagtta
accagtacaattatgtgcgttnnatgccgaaccgtatccttggtccatgagtctttcctt
gatttgtcgcttcctgtactagatgatcagaaagtaaaaactacaaatgagagaaatgtt
aaaaaaaacaaagaaaaggaatctgaagatgaagaggataaaaacaatgactgttacctt
aagcagagagatgagccccctggtacaagtaagcaccttcagaaaaaagcaaagaaacag
gccaaaaaacaagccaagagccagcgccgccagcaaaaacttcaagggaaggtgcttcac
ttgacagatatctgtgcaactgaaccatcagaaaaagatgtcgagtataaccaagagtca
gagacagaaattaactctgaaactcctgatatgaagcaagaagtggaatcatcaaatgat
tgcaaagatcagtgcttaactcagaaagacctgagtatagagggaaatagtacagaagtt
cagagcacacgtgaaaatataggaaagccagaacaggagggtgtagaaaaggagtctctc
atggatctccctatggaaggcttagattcttctacaacagttgtcaatggccttgacaac
ctatctttgaaagatgaggacgttgaaaatgaagatgaggaagagcttgctactgacttt
tcaaaattacacttgggtgccaatgctgaatctgatacgagtaccttagaggaccttcaa
agtgttcccatcaaaacatgtgaagtatcgactgaagatccagaaacagccttttgtacg
cttgcaaacagggacgatctgaacccggaagaaggttcaatctatcactgtttgtatcag
tttacccgtaacgaaaaacttactgagaccaataaactactctgtgatgtatgtacacaa
agacattatggaccaaagaagaacataaaaagtgaaaagaagtatgtttatactgatgcc
aaaaagcagatgctaatctctcttgcacctccagttttaactcttcacttaaagaggttt
caacaggctggatttaatctacggaaggttaacaggcatatcaagtttccagaagtgata
gacttggcccctttctgtacagttaaatgtaaaaacgtggctgaggggaatacaaaagta
ctgtactctctctatggagttgtggaacatagtggaacaatgaggtttgggcactacact
gcttatgctaaaatgagaagtatgaacaaccatctctccgatcttgtccttcgaggacag
tctcctcaagcttcagaaactgaaacagtcaaagggcagtggttccacatcagcgacacc
catgtacaagccgtgtctgcatcgaaagtgctgagctcgcaagcttatctcctgttctac
gagcgactgctgtaa
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