Charadrius vociferus (killdeer): 104295303
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Entry
104295303 CDS
T08577
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03250
Viral life cycle - HIV-1
cvf03272
Virion - Hepatitis viruses
cvf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104295303 (PDCD6IP)
03272 Virion - Hepatitis viruses
104295303 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104295303 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104295303 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104295303 (PDCD6IP)
Membrane trafficking [BR:
cvf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
104295303 (PDCD6IP)
Exosome [BR:
cvf04147
]
Exosomal proteins
Proteins found in most exosomes
104295303 (PDCD6IP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
ThiD2
Motif
Other DBs
NCBI-GeneID:
104295303
NCBI-ProteinID:
XP_009893337
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MGSRREREGPDSALVCYLSNSCITNIDEERVSQFGKNLSGCLRAPSRGKLSWKIFASIPV
QRHVLETLPTVSITDNAGQKKKAAKLAVVTDRIFCLAVQETYWFGARKTLAPTVTKRLAL
LELECGVMSSSLVPCWCDGVVSLGNKTAEYSTCAAEHLKKHVTGEGWVEYGTPYSSLSLT
SHELSTSRCFYRRLTGRLTGLAKLPLPQLSSASHVFRYTALLRRQHSSSRYYDQLCSIEP
KFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKTCVLFNCGALASQIAAEQNL
DNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISPDTVGTLSLIMLAQAQEVFF
LKATRDKMKDGIIAKLANQAADYYGDAYKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQ
SVLAKQQKKFGEEIGRLQHAADLVKTVASRYDEYINVKDLVDKINRALTAAKKDNDFIYH
DRVPDLKDLESIGKASLVKSTPVVVPLSQKFTDLFEKMVPLQVQQSVSVYNQRKADLVNR
SIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQSILNKSKSVIEQGGIQTVDQLIKDL
PELLQRNKEILDESLRLLDEEENTDNDLRTKFKERWQRTPSNELYKPLRTEGANYHNILN
KAVQADGRVKERYQSHRDTIALLCKPESELNAAIPSANPAKTLQGSEVVNVLRTLLANLD
EVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINEEAISSTELDRIYGSYVQKVQESLK
TQEEILKNIQNAHQDFSKMKQSNNESNLREEVLKNLAVANDNFVELVANLKEGTKFYNEL
TEILPKFQNKCSDIVFARKTERDELLKDLQQSIAREPSAPSIPLPTYQTTSAGGTKPAAS
STPTPAPRTMVGTKPQPPARPPPPVISAASSPSSASAPSGTAAPPAAPPAAAAAPAAAPA
PTPGASAPAASTAPSQAQGPPYPTYPGYPGYCQMPMPMAYNPYMYGQYNLPYAPSPVYQN
PGQAPYPAPQQPGYPFTQQPFYPQQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcgaagggaaagggaaggaccagattcagcactcgtttgttacttgagtaat
tcctgcattaccaatattgatgaagagagggtttctcagtttggaaagaacttgtctggc
tgcttgagagctccctctcgtggtaaactttcctggaagatcttcgcaagtattcccgtc
caaaggcacgtccttgaaactttacctaccgtatctattactgataacgctgggcagaag
aagaaagcagccaagctagcagttgttacggatcgtattttttgcttggctgtccaagaa
acctactggtttggtgcaaggaagactctggctccaacagtcaccaagcgcttagccctc
ctggagctggagtgtggtgtgatgtcctcctcccttgtgccttgttggtgtgatggtgta
gtcagcctaggaaacaagacagctgaatattccacctgtgctgcagaacacctgaagaag
cacgttacaggtgaagggtgggttgagtatgggaccccttactcctctctaagcctgaca
tctcacgagctttccactagccgctgcttctaccggcgcctcacaggtcgtctcaccggc
ctagcgaagttgcccttaccacagctgagctccgcgagtcacgtctttcgttacacggcg
cttctccggaggcagcactccagctctcgatactatgatcagctgtgttcaattgaacca
aagtttccgttctctgaaaatcaggtctgtgtaacatttacatggaaggatgcttttgat
aaaggatcactttttggaggatctgccaaattggctctggcaagtttggggtatgagaag
acctgtgttttgttcaactgtggagcattggcaagtcagattgcagcagaacagaatcta
gataatgatgaaggactgaaagcagcagctaagcactatcagtttgcaagtggtgctttc
caacacatcaaagacacggtgttgtcagccttgaatcgagaaccaacagtggacatctct
ccagacacagttggaactctcagtctgattatgttggctcaagcccaagaagtcttcttt
ttgaaggctacaagagataaaatgaaagatggtatcatagctaaactagctaatcaagct
gctgattactatggtgatgcttacaaacaatgtcaatataaagatactttgcccaaggag
gtgtttcctgttctggctgcaaagcactgcattatgcaggcgaatgcagaataccatcaa
tctgtcctggcaaaacagcagaagaaatttggtgaagaaattgggaggttgcagcatgca
gcagacttggtgaaaacagtggcgtctcgttatgatgaatatataaatgttaaagatctg
gttgacaaaatcaaccgtgcacttacagctgccaaaaaagacaatgacttcatttaccat
gaccgggttcctgacctgaaagacttggagtccattggaaaagccagtcttgtgaagtct
actccagttgttgttcccctcagtcagaaattcactgacctgtttgagaagatggttcca
ttgcaagttcagcaatctgtgagtgtttataaccagagaaaggcagatctagtaaacagg
tcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttggcttccctcaat
cttcctgctgctatcgaagatgtgtctggtgacactgttcctcagtctattttgaacaag
tctaagtctgtgattgaacagggaggaattcagactgttgatcagctgatcaaagatctg
cctgaactgctacaaaggaacaaagaaattttagatgaatcactaagattattagatgaa
gaagaaaatacagacaatgacttgcgaacaaaattcaaagaacgctggcagaggacacca
tccaacgaactgtataagcctttaaggacagagggagccaattaccataatattttgaat
aaagctgtgcaagcagatggccgagttaaagagcgctatcagtctcaccgggatacgatt
gcactgctgtgtaagccagagtcagaacttaacgcagccattccttctgccaacccagca
aaaacattacaaggaagtgaggttgttaatgtcttaagaactttgctggccaatctggat
gaagtcaagaaggagagagaacaactggaaaatgacctgaaatctgtaaattttgacatg
acaagcaaattcctgactgcacttgcacaggatggtgctataaatgaggaggctatctct
tcgacagagttggacagaatttatggaagttatgtacagaaagtgcaagagtccctaaaa
acgcaggaagaaattctcaaaaacattcagaatgcacaccaggatttttcaaagatgaaa
caatcaaacaatgaatctaatttaagggaagaagttttgaaaaacttagctgtggcaaat
gacaactttgtggaacttgtagccaatttgaaagaaggcacaaagttttacaatgagctg
accgaaatcctgccgaaattccaaaacaaatgcagtgacatcgtctttgctcgcaagact
gaaagagatgagctgctcaaagatttgcagcaaagcattgctagggaacccagtgctccc
tctattcctctgcctacatatcagaccacatcagctggaggaactaagcctgctgcatcg
tcgactcctactccagcacccagaaccatggtggggactaaaccacagccaccagcacgg
ccaccaccgccagtgatttctgcagcaagcagtccctcttcagcatcagcaccctccgga
acagctgcacctcctgctgcacctcctgctgctgctgctgctcctgctgctgctcctgct
cctaccccaggagccagtgcacctgcagcaagcactgcaccttcacaggcacagggacct
ccttacccaacatatccaggttaccccgggtattgccagatgccaatgccaatggcgtat
aatccatacatgtacggtcaatataatctgccatatgcaccctcaccagtgtatcaaaac
cctggacaagcaccatatccggcacctcaacaacctggatacccttttactcaacagcct
ttttaccctcagcaataa
DBGET
integrated database retrieval system
