Charadrius vociferus (killdeer): 104295369
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Entry
104295369 CDS
T08577
Symbol
ITGB1
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03271
Virion - Rotavirus
cvf04145
Phagosome
cvf04510
Focal adhesion
cvf04512
ECM-receptor interaction
cvf04514
Cell adhesion molecules
cvf04530
Tight junction
cvf04810
Regulation of actin cytoskeleton
cvf04820
Cytoskeleton in muscle cells
cvf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
104295369 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104295369 (ITGB1)
04514 Cell adhesion molecules
104295369 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104295369 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104295369 (ITGB1)
04530 Tight junction
104295369 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104295369 (ITGB1)
04810 Regulation of actin cytoskeleton
104295369 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104295369 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104295369 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104295369 (ITGB1)
04515 Cell adhesion molecules [BR:
cvf04515
]
104295369 (ITGB1)
04090 CD molecules [BR:
cvf04090
]
104295369 (ITGB1)
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104295369 (ITGB1)
Exosome [BR:
cvf04147
]
Exosomal proteins
Proteins found in most exosomes
104295369 (ITGB1)
Cell adhesion molecules [BR:
cvf04515
]
Integrins
Integrin beta subunits
104295369 (ITGB1)
CD molecules [BR:
cvf04090
]
Proteins
104295369 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
104295369
NCBI-ProteinID:
XP_009893425
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MEDIENPRGSKQVLEDREVTNRKKGAAEKLKPEAITQIQPQKLVLKLRVGEPQTFSLKFK
RAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMVEMGKITSDFRIGFGSFVEKTVMPYI
STTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELVGKQHISGNLDSPEGGFDAIM
QVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLENNMYTMSHYYDY
PSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSAVGTLSSNSSNVIQLIVDAYN
SLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCSNISIGDEVKFEINVTANECP
KKGQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSPACHEGNGTFECGACRCNEGR
IGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQCVCKKRENTNEVYSGKYCEC
DNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLDTFPCMASNGQICNGRGTCEC
GTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFDKGEKKETCSQECMHFNMTRVES
RDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEANVHVVETPECPSGPDIIPIVAG
VVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTVSQEAFICIKAAVVEEEY
KIFVHVPQIFKIVFLPFGLWTNRSGEAAFKEKHPFSLKATMTKGSTPATSSSLAAAIVFG
GENPIYKSAVTTVVNPKYEGK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatagaaaatcccagaggtagcaaacaggtgcttgaagatagagaagtaacg
aatcgtaagaaaggtgctgcagagaagctgaaaccagaggccattacacagatccagcca
caaaaattagtactgaaactaagagttggggaaccccaaacgttttcattaaaatttaag
agagctgaagactaccccattgacctttattatcttatggacctctcctattctatgaaa
gatgatttagagaatgtgaaaagtcttggaacggctctgatggtagaaatgggaaaaata
acttcagactttcgaattggctttggctcttttgtggagaaaactgtgatgccatatata
agtacaacaccagccaaactcagaaatccctgtacaggtgaccagaactgtacaagtcca
tttagctataaaaatgtgcttagccttaccagtgaaggaaataaattcaatgaacttgta
ggtaaacagcacatttctgggaatttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggatggagaaatgttacaagactactagtgttt
tccacagatgctggatttcactttgcgggagatggtaaacttggtggaattgttttacca
aatgatggaaaatgtcatctagaaaataatatgtacacaatgagccactattacgattat
ccctctattgctcatctggtgcagaagcttagtgagaacaatattcagacaatctttgct
gttactgaagagtttcaggccgtttataaggaattgaaaaatctgataccaaaatcagca
gtgggaacattgtcttcaaactccagcaacgtgattcagttgatcgttgatgcatacaat
tccctttcttcagaggttatcctggaaaacactaagttaccaaaaggagtgacaatcagc
tataagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaaatgttct
aacatttcgatcggagatgaggttaaatttgagattaatgtaacagctaatgaatgtcca
aagaaaggacaaaatgaaaccattaaaattaaaccactgggattcactgaagaagtggaa
attaatctccagttcatctgtgagtgtcagtgtcaaagtgaaggagaacctaatagtcca
gcctgccacgaaggaaatggaacatttgaatgtggagcatgcagatgtaatgaagggcgt
attggaagactatgtgaatgtagtacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagtacagaaatatgcagtaacaatggagaatgcatttgtggacaa
tgcgtatgcaagaaaagagaaaacaccaatgaagtgtactctggcaaatactgtgaatgt
gataacttcaactgtgatcgatcaaatggtttgatttgtggaggaaatgggatctgcaaa
tgcagagtgtgcgagtgtttccccaacttcactggcagcgcatgcgattgttctttggat
acttttccatgtatggcatccaatgggcagatttgcaatggaagaggaacctgcgaatgt
ggaacctgtaactgtacagatcccaaattccaaggccccacgtgtgaaatgtgtcagact
tgccttggtgtctgtgcagagcacaaggactgtgttcaatgcagagctttcgataaggga
gaaaagaaggaaacatgttctcaggaatgtatgcatttcaacatgacacgagtagaaagt
cgagacaagttgccacagcctggacagcccgatccgttgtctcattgcaaagagaaggat
gtggacgactgctggttctacttcacgtattctgtcaactcaaatggtgaagccaatgtc
cacgtggtagagaccccagaatgccccagcggccctgacatcattcccattgtagctggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacggtaagtcaagaggcttttatctgtataaaagctgcagtagttgaggaagaatat
aagatttttgttcacgtgcctcaaatatttaagattgtattcctgccttttggcctatgg
acaaacagaagcggagaagctgcctttaaggagaaacaccctttttctctgaaagcaacc
atgacgaaaggcagtacaccagctacatcgtcttccttagcagcagctattgtttttggg
ggtgaaaatcctatttacaagagtgcagtgacaactgtggtcaatcctaaatacgaggga
aaatga
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