Charadrius vociferus (killdeer): 104295393
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Entry
104295393 CDS
T08577
Symbol
ARHGEF12
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04270
Vascular smooth muscle contraction
cvf04625
C-type lectin receptor signaling pathway
cvf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104295393 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104295393 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
104295393 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104295393 (ARHGEF12)
Membrane trafficking [BR:
cvf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104295393 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDZ
PDZ_6
SOS1_NGEF_PH
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
104295393
NCBI-ProteinID:
XP_009893451
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDL
AAFGHMSPIMTSPHSPGASGNAERITSPVLVGEENNIVHNQKVEILRKMLQKEQERLQSL
QEEYSRSPTTRLLKEIQETKKHIPQLQEQLSKATGCTQDGVLSSRSATESLQISEVEAES
GDGVSKLDYSGDSSSRPNSDIADSPRSGLKERIYPDESPEKTEFQDTDSQSSVGSPLSRV
GPQIIGAEDDDFDTEQEQINGQCSCFQNIELLKSRPAHLAALLHHVVSQFDPAALLCYLY
TDLYKQTNSKETRRVFLEFYQFFLDRAANLKVPVPDEISLELERRRPELLPEELHRQFIQ
TMQDKVCPEVQRNLEDFRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIIAKI
EEVLMTSQPLEEDKSSTMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEK
EGEEKGKRRGFPNILGPPRRPSRHDSSAIGRAMEMQKPRHPKHLPTASSVSPEPPDSSKM
RQSGSSSDGTDAPYPPANPMSPLAMGPFSSPEGSKDSETGLKQPGEAPPANDCMDGTPRT
PNNTFEFPSPLENLQEEEGESERTVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDTDPP
NWQQLVSREVLMGLKPYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSD
KRKIFSNLEDILGLHVALNDQMKAVRKRNETSVIGQIGEDLLSWFSGPAEEKLKHATATF
CSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNI
AKYTELPEEKEKVKKAADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMM
DEFRNLDLTKRKMLHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILA
STADSKHTFSPIIKLNTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLI
AQMAGTVKMGNTRRVIPLPQSGPGEXVKVAGGRRAEEEQQKLKEQHDIPARSLQSPDKDL
GLESPLILNAQSSSPIMSEKSKVESLLVSERQFDKVQQADLTLKDSSACYEHTTTSLPSV
SEGQWALDALRNLGLLKQLLVQQLGFSEKGTLEGRQRFPRFRTVSQEAQTESGSEPGLQH
SDNNKFHQPGTDRTLPRTGTNESTASYGLRTSAESPASGDAMQLIVRDPRSSSNLAIDRM
SMNLEISTTELEGVSADESGEHFFDAREAHSDENPSESELMERKEEEDVQIRISGNYLIL
DGYGTVQESSTDEEVSSLVLQCTAGGRTSLDSAQQQPLSPRDTQSDGGSSPFAEEMMASR
WGGVEESCSFVASAHFSIESRVQMMQYIQKIEDDLEKLKEVEEDYTNLRRQGLAGSASTG
EHSDKS
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctggagtgcaaacaggtgatagaattatcaaggtgaatggcactcttgtaaca
cactcaaaccatttggaggtggtaaagctgatcaagtcgggttcctatgtagctctcact
gttcaggggcgcccaccggggtcgccccagattccattagctgattcagaagtggatctg
gcagcatttggacatatgtctcccatcatgacatctccccattcacctggagcatcagga
aatgcagaaaggataactagcccagtgcttgtgggggaggagaataatattgtccacaac
cagaaggtggagattctgagaaagatgctacagaaagagcaggagcggctgcagtctctg
caagaagagtatagccgatcacccaccacgcgactgctcaaagagatacaggaaacgaag
aagcacattcctcagctgcaagagcagttgtccaaagccacaggctgtactcaggatgga
gtcttgtcctccaggtctgcgacggaatcgctgcagatcagcgaagtggaggcagagagc
ggggatggtgtgagcaaactggattatagtggtgacagctcttcccgaccaaacagtgac
attgctgacagccctcgcagtggcttgaaggagcggatttatccagatgagagcccagaa
aagactgagtttcaagatactgattcccagtccagtgttggaagtcctttatcccgagtg
ggacctcagatcattggagcagaggatgatgactttgacactgaacaggagcagattaat
ggacaatgcagctgtttccaaaacattgagctcctgaaatctcgcccagctcacctggct
gctcttctgcatcatgtggtgtcccagtttgaccctgcagcattgttgtgctacctttac
acagacttgtacaagcagaccaactccaaagagactcggcgtgtcttccttgagttttac
cagttcttcttggaccgagctgcaaatctgaaagttccagttccagatgaaatctcctta
gaactagaaagaaggcggccagaactccttcctgaagagcttcatcgccagtttatacaa
actatgcaagataaagtctgtccagaagttcaaaggaatctggaagatttcaggcagaaa
cgtagtatgggattgaccctggcagaaggagagctaaccaagctggatgcagaaagagtt
cgtgaccggaatgcagtggagaaggaaagagcatgtgcagaacagattattgctaaaatt
gaggaagtcttgatgacatctcagcctttggaggaagacaagagttccacaatgcagtat
gtgattcttacttacatgaaacaccttggagtcaaagttaaagaacctcggaacctggag
cagaagcgtggtcgtattggtttcttgccaaagatcaagcaaagtatcaagaaggagaaa
gaaggagaggaaaaaggaaagagaagaggctttcccaatattcttggcccaccgaggaga
ccaagtcgacatgatagcagtgcaattggcagagccatggaaatgcagaagcctcggcat
ccaaagcacctacctacagcgtcttctgttagcccagagccaccagattctagcaagatg
cgccagagtgggtcctccagtgatggaacagatgcgccataccctcctgccaacccaatg
tctcctttggcaatgggtcccttttcctctccagagggaagcaaggacagcgaaacaggt
ttgaagcagcctggagaagctccacctgctaatgactgtatggacggcacaccccgcaca
ccaaataatacctttgaattcccatctcctttggaaaacttgcaggaggaggaaggagaa
tcagagagaacggttgacatgggaacaccaaagccttttcgcaagatggacagtgttggt
ttcgcagatgtacaaagtgaagatgagctatatgattttgacatggacacggaccctccc
aactggcagcaacttgtgagccgagaagtgttgatggggctgaaaccctatgaaatcaag
cgccaagaagtgattaatgagttattttacactgagagagctcatgtccgcacactgaag
gttctgcataatgtcttctaccagcgtgtcacccgggaaggaatcctgaactccagtgac
aaacggaaaatcttttcaaatctggaggatatccttgggcttcatgttgcgttgaatgat
cagatgaaagcagtccgaaaaaggaatgagacttccgttattggccaaattggggaagac
ttgctttcctggtttagtggaccagcagaggagaaactgaaacatgcaactgccactttc
tgcagtaaccagccctttgctctagaggtcatcaaatcacgccagaagaaggactctcgc
ttccagacttttgtgcaggatgctgagagtaatccactgtgtcgccggttgcagctgaag
gatatcattcccacagagatgcagaggttgactaagtacccccttctgctggataacatt
gctaagtacacagaactgccagaagagaaagagaaagtgaagaaagcagcagatcattgt
cgtcagatccttaaccatgtgaaccaagctgtcaaagagtctgagaacaagcagcatttg
gaagattatcagcgtcgtcttgacctgtcctacttgaaacagtctgaggatcccatgatg
gatgagttcaggaacttggatctaacaaagagaaaaatgcttcatgaaggacctctaact
tggaaggttaatcgtgacaaaactattgatctctacactctacttctggaggacattctg
gtgctgttgcagaaacaagatgataaactggtactgaagtgtcacagtaaaatcttggca
tcgacagctgatagtaaacacaccttcagtcctatcatcaaattgaacaccgttctggtt
cgtcaggtggcaacagataacaaagctttcttcgtcatctccatgtcagaaaatggcgct
catatttatgaactggtggcacagactgtttcagaaaagaatgtatggcaggaccttata
gctcagatggcagggactgtaaaaatggggaataccagaagagtgattccattaccacag
tcaggacctggcgagtaagtaaaagtagctggcggaagaagggctgaagaggagcagcag
aagctcaaagagcagcatgacattcctgcccgtagtctacaaagtccagataaagatttg
ggccttgagtctcccttaatactgaatgctcagtcttcttcgcccatcatgtctgaaaag
tccaaggtggaaagtcttcttgtgtcagaaagacagttcgataaagtgcagcaggcagat
ctgacacttaaagattcttctgcatgctatgaacacacaaccaccagtttaccttcagtg
tcagaaggacagtgggcactggatgcattaaggaacttgggcttgctgaaacagttgttg
gtgcagcagcttggcttttctgagaaggggacccttgaaggccggcagcgctttcccagg
ttcaggacggtttctcaagaagcccaaacagagagtggaagtgagcctggactacagcac
tctgacaataacaaatttcaccagcctggaacagacagaacgcttccaagaaccggaact
aatgagtccacagctagttatggcctccggacttcagctgaatcgccagcttcaggggat
gccatgcagctgattgtgagagaccccagatcaagtagtaacttagcaatagaccgcatg
agtatgaatctggagatctcaaccacagagctggaaggggtgagtgctgatgaaagtggg
gagcatttttttgatgctcgagaagctcacagtgatgaaaatccatctgaaagtgaacta
atggaaaggaaggaggaagaggatgtgcaaatacggatctcaggaaattatttgatcctt
gatggatatggaacagtgcaggagagctccacagatgaggaggtatcgtctctagttctc
cagtgcactgcaggtggacgcacctctttggactctgcacagcagcagccactttcccca
cgggacactcagtcggatggaggaagctccccgtttgctgaggagatgatggcctcacgc
tggggtggagtggaagagtcctgctcatttgtagcaagcgctcacttctctatagagtca
cgtgtgcagatgatgcagtatattcaaaagatagaggatgaccttgaaaagttaaaggag
gttgaggaagactacaccaatctccgacgccaagggctggctggatcagcctccacggga
gagcactcagataaaagctag
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integrated database retrieval system
