Charadrius vociferus (killdeer): 104295400
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Entry
104295400 CDS
T08577
Symbol
PVRL1
Name
(RefSeq) LOW QUALITY PROTEIN: nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03266
Virion - Herpesvirus
cvf04514
Cell adhesion molecule (CAM) interaction
cvf04517
IgSF CAM signaling
cvf04520
Adherens junction
cvf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
104295400 (PVRL1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104295400 (PVRL1)
04517 IgSF CAM signaling
104295400 (PVRL1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104295400 (PVRL1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104295400 (PVRL1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvf04515
]
104295400 (PVRL1)
04090 CD molecules [BR:
cvf04090
]
104295400 (PVRL1)
Cell adhesion molecules [BR:
cvf04515
]
Immunoglobulin superfamily
Nectin family
104295400 (PVRL1)
CD molecules [BR:
cvf04090
]
Proteins
104295400 (PVRL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
C2-set_2
Ig_2
ig
I-set
TM_ErbB1
Ig_PVRIG
Syndecan
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
104295400
NCBI-ProteinID:
XP_009893458
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MKLQVDAGLQAQTVLVNDTVSGFIGTDVVLHCSFTNPLPNVKITQVTWQKATNGTKQNVA
IYNPAMGVSILSPYKERVTFRNPSFKDGTIQLSRLELEDEGVYICEFATFPTGNRESQLN
LTVLAKPTNRMEGTKRPLIAKSGRTEKILVATCTSSNGKPPSTVTWDTKLKGEAEFQEIR
NSNGTITVISRYRLGAGRGGXPLMCVVNYQLDRFTDSMTLNVQYEPEVTIEGFDGNWFLN
RKDVKLICKSDANPPAHTYEWKLPNGTLPGSVEIQNNTIYFKGPVSYSVAGTYICEASNA
IGTRSGLVEVNVTEFPYTPSPIDDRKSMVQPNIPTPVIGGIVGGVSLVLVVAVVLFVVLR
RRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPDDSDDEKKPGPLGGSTYEDE
DEDAGGERKLGGPNKYEEDAKRPYFTVDEGEAHPEPYDERTLGFQYDPEQLDIAENMVSQ
NDGSFISKKEWYV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcaggtggatgcagggctgcaagctcagactgtcttagtcaatgacacagtc
tcgggatttatcgggacagatgtggtcctgcactgcagcttcaccaatccgctccccaat
gtgaagatcacgcaggtcacatggcagaaagccaccaatggtaccaagcagaatgtggcc
atctacaaccctgccatgggggtctccatcctctctccctacaaagagcgggtgactttc
cggaatccttccttcaaagatggcaccattcagctctctcgtctagagctggaggatgag
ggagtttacatctgtgagtttgctaccttcccaactggcaaccgggaaagccaactgaac
ctcactgtgctggccaagcccacaaatcggatggagggcaccaagcggccacttattgct
aagtctggcaggacagaaaagatcttggtagctacctgcacctcctctaatgggaagccc
cccagcactgtcacctgggacaccaagctcaaaggcgaagcggagtttcaggagatccgg
aatagcaatggcaccatcacagtgatcagccggtaccggctgggggcggggcgggggggg
nccccgctcatgtgcgtggtcaattaccagctggatcgcttcaccgacagcatgaccctt
aacgtgcagtatgagccagaagtcactattgagggctttgatggcaactggtttctcaac
cggaaggatgtgaagctgatatgcaaatctgatgccaaccccccagctcacacctatgaa
tggaagctgccaaacgggactctgccagggagcgtggaaatccagaacaacaccatctac
tttaaagggcctgtctcctacagcgtggctggcacctacatctgtgaggcctccaacgcc
atcggtacacggtcgggcttggtggaagtcaatgtcacagaatttccctacaccccgtct
ccaattgatgatcgcaaatccatggtgcagccgaacatccccacaccggtgattgggggc
atagtgggaggagtctcgctggtcctggtggtggccgtggtgctctttgtggtactccgg
cgccggcgtcacaccttcaagggtgactacagcacaaagaagcacgtgtacggcaatggc
tacagcaaggctggcatcccacaacatcacccccccatggcccagaacctccagtatccc
gacgactcagatgacgagaagaagccgggcccgctgggcggcagcacctatgaagacgag
gacgaggatgcaggaggcgagcgcaagctgggcggccctaacaaatacgaggaggatgct
aagcggccttacttcacggtagacgagggggaggcgcaccccgaaccttacgacgaaagg
acactcggcttccagtatgaccctgagcagcttgacatagcggagaacatggtctcacag
aacgacggatcttttatttccaaaaaggagtggtacgtgtag
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