Charadrius vociferus (killdeer): 104295539
Help
Entry
104295539 CDS
T08577
Symbol
FXR1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104295539 (FXR1)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104295539 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
104295539 (FXR1)
mRNA cycle factors
Stress granule specific factors
104295539 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
FXR_C3
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
104295539
NCBI-ProteinID:
XP_009893603
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MMKGEFYVIEYAACDATYNEIVTYERLRPVNQNKTVKKNTFFKCTVDVPEDLRDACANEN
AHKDFKKAVGACRIFYHAETAQLIILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEA
TKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELEEDTGTFRIY
GETADAVKKARSYLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENK
LPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRLERLQIDEQLRQIGMGFRPS
SARAPEKEKGYTTDESTLSSVQGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERK
DELSDWSLAGEDDRESRHQRDNRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNP
YSLLDNTESDQTVDTDASESHHSSNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLDD
SDKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRAESQSRQRNPPKETLAKTKKETAKDA
IDENSPSEKAVNGPATASGDEPSKLQHSPDEKKVTVQEDGNNQEEAVLNGVS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaggagagttttatgtcattgaatatgctgcttgtgatgccacttacaatgaa
attgtcacttatgaacgactccgacctgtgaatcaaaataaaactgttaagaagaatacc
tttttcaagtgcacagtggatgttcctgaagatctgagagatgcgtgtgctaatgaaaat
gcacataaagatttcaagaaagctgtgggagcgtgtcgaattttttatcatgctgaaact
gctcaactaataatactgtctgccagtgaagcaacagtgaagagggtgaatatactgagc
gacatgcatttgcgcagcattcgtaccaaacttatgcttatgtcaagaaacgaagaagct
acaaaacacttagaatgcacaaaacagcttgctgcggcgtttcatgaggaatttgtagtc
agagaagatttaatgggacttgctataggaacgcatggcagtaacatacagcaagccaga
aaggttccaggagttactgccattgaacttgaggaggacactggtactttcagaatctat
ggagagactgctgatgcagtaaaaaaagctagaagttacttggagtttgtggaggatttt
attcaagttcccagaaatcttgttggaaaagttattggaaaaaatggaaaagtgattcag
gagattgtagacaagtctggagtcgtcagggtgagaattgaaggagataatgaaaataaa
ctgccccgggaagatggaatggtaccgtttgtatttgttggtactaaagaaagcattgga
aatgtccaagttcttttagaataccacatcgcatatctaaaggaggtagagcaactaaga
ctggaaagactccagattgatgaacaattgcgtcagattggtatgggtttcagaccttct
tccgctagagctcctgaaaaagaaaagggttatacgactgacgagagcaccctctcctcc
gtgcaaggttccagatcctacagtggaagagggagaggccgcaggggtcccaattacaca
tctggttacggtacaaactctgagctctctaatccctctgaaacagaatctgagagaaaa
gatgaacttagtgactggtccttggcaggagaagatgaccgagaaagcagacatcaacgt
gacaatagacgacgtcctggaggacggggacgtagtgtatctggaggtcgtgggcgtggt
ggacctcgtggtggcaagtcatccattagctctgtgcttaaagatccggacagcaaccct
tacagcttgctcgataacacagagtcagaccagactgtggataccgacgctagtgaatct
caccatagcagtaaccggcgcaggaggtcacgcaggcgaaggactgatgaagatgctgtt
cttatggatggaatgacagagtctgacacagcttctgtcaatgagaatggtttagatgat
agtgacaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgcttcaggggtcaggca
gaagatagacagccagtaacagtagctgattatatatcacgagctgaatctcaaagtaga
cagagaaaccctccaaaggagacactagccaaaaccaagaaagaaacggcaaaagatgcg
attgatgaaaacagcccttctgaaaaagcagtgaatggtcctgctacagcttctggggat
gagccttctaaactacagcacagtcctgatgaaaagaaagttactgttcaagaggatgga
aataatcaggaagaagcagtgctgaatggtgtttcataa
DBGET
integrated database retrieval system
