Charadrius vociferus (killdeer): 104295583
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Entry
104295583 CDS
T08577
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104295583 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104295583 (CPSF2)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104295583 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104295583 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104295583
NCBI-ProteinID:
XP_009893658
UniProt:
A0A099ZUU8
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRAFGGKDIKVYVPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDSE
MQVDMPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgactacgctctctggggtgcaggaggagtctgccctttgc
tatctgttacaagtagatgaatttcgttttcttttggactgtggttgggatgaaaacttt
tctatggatattattgattctctgaggaaacatgtacaccaggttgatgctgttcttctt
tctcatcctgaccctctacaccttggtgctcttccatatgcagttggaaaaatgggcttg
aattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctttaccagtcccgccataatactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggcaaa
ggacatggtttgtcaatcaccccgttgccagctggccacatgataggaggcacaatttgg
aagattgtcaaggatggagaggaagaaattgtttatgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttattaca
gattcatttaatgctacttacgtacaacccaggaggaagcaaagggatgaacagctactg
actaatgttttggagacattacgaggtgatggaaacgtattaatagccgtggatacagca
ggcagagttcttgaacttgctcaacttcttgatcagatctggagaacaaaagatgcagga
ttaggagtctactctctagcgcttttgaataacgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagagaaac
aatccttttcagttccgccatctgtccttatgtcatagtctgtctgatctggctagagtg
cctagtccgaaagttgttcttgccagtcaacctgacttggagtgtgggttttctagagat
cttttcattcagtggtgccaggattccaaaaactctataatcttaacttaccgcactacg
cctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggagaaa
ctgaagaaagaagcagcgaagaagctagaacagtctaaagaggcagatatcgattccagt
gatgagagcgatgctgaagaggatattgatcagccaactgtacataagaccaaacatgat
ttgatgatgaaaggtgaaggtagtcggaaaggaagcttcttcaaacaggcaaagaaatct
tatccaatgtttccagcccctgaagaaagaattaaatgggatgagtatggcgagattata
aaacctgaggattttctagttccagaacttcaagcaacggaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagagcctatggaccaggatttatcagatgttcctacc
aaatgtatttctgcaacagaatccatggaaattaaagccagagttacatacattgactat
gaaggacgctctgatggggactcaattaaaaaaatcattaaccaaatgaaaccaaggcaa
ctagtcattgtccatggaccacctgaggccagtcaggaccttgcagaatgttgcagagct
tttggtggaaaagatattaaagtttacgtgccaaaactgcatgaaactgtagatgcaacc
agtgaaactcacatttaccaggtcaggttaaaagattcacttgtcagctcccttcagttc
tgtaaagccaaggatgctgagttggcttggatagatggtgttctggatatgcgggtttcg
aaagtggataccggagttattttggaagagggagagctgagggaagatgaagactcagag
atgcaagtggatatgccttcctcagactccagtgtcattgcacaacagaaggccatgaaa
agcctcttcggtgatgatgacaaggagatgtgtgaggagagtgagatcattcctactttg
gaacctcttccacctcatgaggtccttggacatcagtctgtgtttatgaatgagccgaga
ctgtctgacttcaagcaagttctgttgcgagaaggtatacaagctgaatttgtaggagga
gttcttgtgtgcaacaatctggtggctgttcgcaggactgaaacagggcgcattggattg
gaaggctgtctctgtcaagacttctataggataagagaccttttgtacgagcaatacgct
attgtctaa
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