KEGG   Charadrius vociferus (killdeer): 104295623
Entry
104295623         CDS       T08577                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104295623 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvf03041]
    104295623 (SF3B4)
Spliceosome [BR:cvf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104295623 (SF3B4)
 Complex B
    104295623 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    104295623 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 104295623
NCBI-ProteinID: XP_009893694
LinkDB
Position
Unknown
AA seq 405 aa
ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK
IMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKI
MRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAE
RLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTSLGPGVTPPGLPPPGSFPPPVPPPGA
MPPGMPPAMPPPPMPPGAGAPGPPSGAAPTGGHPPHPHPFPPGGMHHPGKRRTVHHGPPG
MGQHHPGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPHFGSPMGHPGPMPHHGMRGPPP
LMPPHGYNGPPRPPPYGYQRVPLPPRPAQRPPGVPPRGPLRGPLP
NT seq 1220 nt   +upstreamnt  +downstreamnt
atgcgacggtgtacgtcggggggttggatgagaaggtcagcgagccgctgctgtgggagc
tctttctccaggcgggaccggtggtcaatacccacatgcccaaggatcgagtcacgggcc
agcaccaaggctatgggtttgtggagttcctcagcgaggaggacgcggattacgccatta
agatcatgaacatgatcaagttgtatgggaagcccattcgagtgaacaaagcctcggccc
acaacaaaaacctggacgtgggcgccaacatcttcatcggcaacctggaccccgaaatcg
atgagaagctgttgtacgacaccttcagcgccttcggggtgatcctgcagacgcccaaga
tcatgcgagaccccgacacgggcaactcgaagggttacgccttcatcaacttcgccagct
tcgacgcctcggacgctgccatcgaggccatgaatggacagtacctctgcaaccggccca
tcaccgtttcctacgccttcaaaaaagattccaaaggcgaacggcacggctcggccgccg
agcgtctcctggcagcccagaacccgctctcgcaggcggatcggccccatcagctcttcg
ccgacgctcctcctcctccctctgtccccactcccgttgtcacctccctgggacctggcg
tcacccctccaggcctcccgcctccgggatcgttccccccgccggtgcctccccctggag
cgatgcctcccggcatgcctcctgccatgccgcccccacccatgccgcccggcgcgggtg
ctcccggccctccctccggggctgcgcccaccgggggacacccccctcacccgcacccct
tccctccgggcgggatgcaccatccaggtaagcgtcggacggtgcaccacgggccgccgg
ggatggggcagcatcacccaggaccgccgggctccggagggcagcctcccccacggcccc
cgcctggcatgccgcaccctggacccccacccatgggtatgccaccccgaggacctcatt
tcgggtcgcccatgggtcacccaggccctatgccgcaccacgggatgcgtggccctcctc
cgctgatgcctccccacggctacaacggtccccctcgccctccgccgtacggctaccaga
gagtccccctgcccccccggcctgcgcagaggccccccggggtgccaccgcgcggcccct
tgaggggccccctgccctaa

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