Charadrius vociferus (killdeer): 104295800
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Entry
104295800 CDS
T08577
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104295800 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvf04515
]
104295800 (LRRC4C)
Cell adhesion molecules [BR:
cvf04515
]
Immunoglobulin superfamily
NGL family
104295800 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
104295800
NCBI-ProteinID:
XP_009893888
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLXXNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETTNMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcagcttcttgtggtggctggt
ctagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagtg
atttgtgtacggaaaaatctgagggacgtgccagacggcatctccaccaacacccgatta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaaacatctgagg
cacctagaaatcctgcagctnnnnnngaatcacatcagaacaattgaaattggggctttc
aatggtctggccaatctcaacactttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctgtcaaaactgaaggaactgtggttgagaaacaaccccatt
gagagcattccttcttatgcttttaacagaatcccttctctccggaggctggatttgggg
gaactgaaaaggctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaacctcgccatgtgcaatcttcgagagattcctaatctcaccccgcttgtaaaa
ctggatgagttagatctttctgggaatcacctgactgccatccggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgctttcgataaccttcagtcacttgtagagatcaatctggcacacaacaatctaaca
ctcctgcctcatgacctgttcacaccactccgcctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tccaacactgcatgctgcgcccgttgccacacacctcccagtttaaaaggaaggtacatt
ggtgagctggacctgaattacttcacgtgttatgctccagtcatagtggagccaccagca
gacctcaacgtcactgaaggcatggctgcagagatgaaatgccgggcatcaacctccctg
acctctgtatcttggattactccaaacggatctgttatgacgcatggggcatacagagtt
cggatcgctgtgctcagtgatggcacattaaattttacaaaggtaactgtgcaagacacg
ggtttgtatacatgcatggtgagtaactctgttggcaataccacagcttctgccacactg
aatgtgactgccctggataaccctggttatacatacttttcaaccgtcacagtagagact
gtggaaccttctcaggatgaggcacagaccacagagcaggttgggcccacaccagttacc
aactgggagaccactaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacattcaccattcctgtgacggacgcaaacaatgggatcccgggaatagatgaggtc
atgaagactaccaaaatcataattggttgttttgtggctattactctcatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacccatcgag
agtcacttgcccatgccagcaatagagcatgagcatctaaatcactataactcttataag
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcaaaagacaatgtacaagagactcaaatctaa
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