Charadrius vociferus (killdeer): 104295804
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Entry
104295804 CDS
T08577
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104295804 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104295804 (RAG1)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104295804 (RAG1)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104295804 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104295804
NCBI-ProteinID:
XP_009893891
UniProt:
A0A0A0A5Z8
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MSIASQMDLPEEIQHPYTKFSEWKFKLFKVRSFEKTPSDDSQHINKDQAEEVASSNKEII
PCKDEAVPRGEKMDLMGNRQALEKDVNDMKTQDNKAHQNNLKQLCRICGVSFKTDCYKRT
HPVHGPVDDETLWLLRKKEKKATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWSIIHRK
FSNAPCEVYFPRNSTMEWQPHSPNCDVCHTTSRGIKRKSQPPSVQHGKRVKTIAERARIN
KGVKNQAQINNKNVMKEIVNCKNIHLSTKLLVVDYPIDFIKSISCQICEHILADPVETTC
RHLFCRTCILKCIKVMGSYCPSCWYPCFPTDLVTPVKSFLNILDSLGIRCPVKECDEEIL
HGKYGQHLSSHKEMKDRELYSHINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEE
GGDIKAVCMTLFLLALRAKNEHRQADELEAIMQGRGSGLHPAVCLAIRVNTFLSCSQYHK
MYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPL
SIDEYPVDTIAKRFRYDAALVSALKDMEEEILEGMKAKNLEDYLSGPFTVVVKESCDGMG
DVSEKHGSGPAVPEKAVRFSFTVMNIAIACGNESKRIFEEVKPNSELCCKPLCLMLADES
DHETLTAILSPLIAEREAMKTSELLLEMGGILRTFKFIFRGTGYDEKLVREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKP
FIETVPSIDALHCDIGNATEFYRIFQMEIGEVYKNPDVSKEERKRWQLTLDKHLRKKMNL
KPMMRMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPARECP
ELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQGFTIDPEDSLG
NSLPLEVLESNDSVEL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagcatcacaaatggacctgcctgaagaaattcagcatccgtatacaaaattt
tctgaatggaaattcaagctgtttaaagtgagatcatttgaaaaaacaccttctgatgac
agccagcacataaacaaagatcaggcagaagaggttgcttcttcaaacaaagaaatcata
ccgtgtaaagatgaagcagtgccaagaggagaaaagatggacttaatgggcaataggcag
gcacttgagaaagatgtcaatgacatgaaaacacaagacaataaagctcatcagaacaat
ttgaagcaactttgccgcatctgtggagtttcatttaaaactgattgttacaagagaact
cacccagtgcatgggccggtggatgatgaaactttgtggcttctgagaaagaaagagaaa
aaagcaacctcttggccagatcttatcgctaaggtttttaagattgatgtgcgaggggat
gttgatactatccatcccactcgattttgtcacaactgctggagtattatccatagaaaa
ttcagtaatgctccatgtgaagtatattttcctcggaacagcacgatggagtggcaaccc
cactccccaaactgtgatgtgtgccacactaccagtcggggaatcaagagaaaaagccag
ccacccagtgtacaacatggcaaacgtgtgaaaaccattgcagaacgtgctcgaataaac
aaaggtgtaaagaaccaagcacagataaacaacaaaaatgtaatgaaagagattgtcaat
tgcaagaacatacatctcagcactaagctgcttgtagttgattacccaatagatttcatt
aaatccatctcttgccagatctgtgagcatattttggcagatccagtggaaacaacatgt
agacatttgttttgcagaacttgcatccttaaatgtatcaaggttatgggcagctattgc
ccctcctgctggtatccttgcttccctactgatctggtaaccccagtgaaatccttccta
aacatccttgatagcctgggtataagatgccctgtaaaggaatgtgatgaagagatcttg
catggaaaatatggccaacacctctccagccacaaggagatgaaagacagagagctctac
agccacataaataaaggtgggcgaccgaggcagcatctcctgtctttgaccaggagagct
cagaaacatcgtctgagagaactgaaacgtcaagtcaaggcttttgctgagaaagaagag
ggtggcgatataaaggctgtatgcatgactttgttcctgctagctttaagagcaaaaaat
gaacacagacaagcagatgaattggaggctatcatgcaagggaggggatctggacttcac
cctgctgtctgcctggcaatccgagtcaacacatttctcagctgtagccaatatcataaa
atgtatagaacggtaaaagctgtcactgggaggcagatcttccagcctttgcatgctctt
cgcactgctgagaaagccctcctaccaggttatcatccatttgaatggaaacctcccttg
aaaaatgtatccactaacacagaagtgggaattatagatggtctgtcaggattgccactc
tcaattgatgagtacccagtagacacaattgcaaagagatttcgatatgatgcagccttg
gtttctgccttaaaggacatggaggaggagatcttggaaggcatgaaagcaaaaaacctg
gaggactatttgagcggtcccttcactgtggtagtaaaagagtcctgtgatggaatggga
gatgtcagtgagaagcatggaagtgggcctgctgtcccagagaaggctgttcgcttttct
ttcacagtcatgaacattgctatagcatgtgggaatgaaagcaagaggatctttgaagaa
gtaaagcccaattcagagttgtgttgcaagcccttgtgccttatgctggctgatgaatcg
gatcatgaaactctgacggcaatcctgagccccctcatagcagaaagagaagctatgaaa
accagtgaactgctacttgaaatgggaggcatcctgagaacattcaaattcatctttagg
ggtacaggatacgatgagaaactcgtgcgagaagtggaagggctggaggcctcaggctcc
acttacatttgtaccctgtgtgatgcaacccgcctggaggcatcccagaatttggtcttc
cactccataaccaggagccacgctgaaaatctggagcgatatgaaatatggaggtccaac
ccatatcacgaatctgttgatgagctccgtgacagagtgaagggtgtttcagccaaacct
tttattgagaccgttccctccatagacgcattgcactgcgacattggcaatgcaacagaa
ttctacaggattttccaaatggagatcggtgaagtttacaagaatcctgatgtctctaaa
gaggagaggaagaggtggcagttaactcttgacaaacacctcaggaagaagatgaacttg
aagcctatgatgaggatgagtggaaattttgctagaaagctcatgtccaaagagacagta
gaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagccctaaaagaactaatg
gacctttatctgaagatgaagccagtgtggcgatcttcatgccctgcgagggagtgtcca
gaattgctgtgccagtatagctacaattcacagcgttttgctgagctcctatctacaaaa
ttcaaatacagatatgaaggcaagatcacaaattatttccacaaaacccttgctcatgtt
ccagaaatcattgaaagagatgggtccattggggcctgggcaagtgaaggaaatgagtct
ggaaacaaactgtttaggaggttccgaaaaatgaatgccagacagtccaaatgctatgag
atggaggatgtcttgaagcatcactggctatatacctctaagtacctccagaagttcatg
aatgctcataaaacattaaaaagccagggcttcaccattgatccagaggatagtttaggt
aactccttgccattggaggtcttggaaagcaatgattcagtggaactctaa
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