Charadrius vociferus (killdeer): 104295853
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Entry
104295853 CDS
T08577
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03420
Nucleotide excision repair
cvf04115
p53 signaling pathway
cvf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104295853 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
104295853 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
104295853 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104295853 (DDB2)
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104295853 (DDB2)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104295853 (DDB2)
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104295853 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104295853
NCBI-ProteinID:
XP_009893951
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MAPVNQPKDKKHERAHEHWPEEAKSAGKRKPDYEELGNEPQAKMLFVRKTSKPPGKIGWS
GGGSMVRNNRVLFHQLERQCSIVHYVYQNMLGGSIRAQLRRCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLEGRAVQVISRAPDCGHEHHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEIWKMKLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKMN
FLHVLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWAKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKANLLPWELEEMRTKSNDSKSQGRKRKGKDL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaagaagcatgaaagggcacatgagcactggcca
gaagaggcaaaatcagctgggaagaggaaaccggactacgaggaactagggaatgagcca
caagcaaagatgttgtttgtgagaaaaacatccaaacccccagggaaaatcggttggagt
ggaggtgggtccatggtgagaaacaacagagtccttttccatcagctggagcggcagtgc
agcattgttcattatgtctaccagaacatgttgggaggttccattcgggcacagctcagg
cggtgtctgcagctgccctttctgcgttctcttgcctcataccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccaacacaccccagtactgta
gctgttggttctaaaggtggagacatcatcctttgggactatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctcttggagacatcaagttcagtccttat
gaggcagtgaagctttatgtggcatcaggggatggcaccctaagtctgcaggaccttgag
ggcagagcggtgcaggtgatctcccgtgccccggactgtggccatgaacaccataatgtt
tgttgctggtactgcagtgttgatgtttctgcaagctgccgtgcagtggtgacaggtgat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagagatttggaagatgaaattg
cacaaaaagaaagtgactcatgtggagtttaactcccgatgtgagtggttgttggccaca
gcgtctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaatgaat
ttccttcatgtgcttcctcatgacaaacctgtcaatgcagcttacttcagcccaacggat
ggcgccaagctcctgagcacagaccagcgcagtgaaatcagggtatactcatcttcagac
tgggccaagccacagcatctgatcccacatccacatcggcagtttcagcacctcacacct
attaaggcaacatggcatcctcgctatgacctcattgtcgcaggtcgctacccagaccct
aagttcccagggtacacagtgaatgagctacgaactgttgatgtatttgatggaaacacc
ggggagatggtttgtcaactccatgatccaaatgcttctggtatcatctcgctcaataaa
tttaaccctatgggagacacactggcttctggcatgggctttaatattctgatctggagc
cgggaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacgtggagggcagaggcaggcaaaccctgggacaagc
aaactcaaagctaacttactgccttgggagctggaggagatgaggacaaaaagcaacgat
tctaaatcacagggaaggaagcgaaaagggaaggatctatag
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integrated database retrieval system
