Charadrius vociferus (killdeer): 104295903
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Entry
104295903 CDS
T08577
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04140
Autophagy - animal
cvf04148
Efferocytosis
cvf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104295903 (VPS18)
04148 Efferocytosis
104295903 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104295903 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104295903 (VPS18)
Membrane trafficking [BR:
cvf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104295903 (VPS18)
Hops complex
104295903 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
104295903
NCBI-ProteinID:
XP_009894019
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MASNETASADSPAFCHAPECASSLGKIKRYVNARLEKETPIFNKQRIDFAPPEKINSLVV
SSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTGECL
YLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGSLF
STNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTEQQ
GFSSIFAMHADHLPSFREFPANFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYSRP
DSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFLEK
FGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPECL
DIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNLKP
SEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNRAS
IYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSPVL
IQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQQA
IHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHQACVHIYKVMEL
YEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSCAL
LKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEMRN
KYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQKKL
AATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPFID
PQKYEEEMQSWL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaatgagacagccagtgctgactcaccggcgttttgccatgcacctgagtgt
gcatcctccctgggaaaaatcaagcgatatgtgaatgcacggctggagaaggaaacacca
atatttaacaagcaaaggattgattttgctcctccagagaaaatcaacagcttggtggtc
tcatctaaccagctctgtatgagccttggcaaagacacccttctcaggattgatcttggg
aagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtctacaag
atgtttttggaccacacaggctctcatctcctgattgctctgaacaccggtgaatgcctt
tacctgaacagaagtgttcagaaagtgcgagcactctcccgctggaaaggccacttgatt
gaaagtgtgggctggaacaaatttcttggttcagagaccaacaccgggcctatcctggtg
gggacagcccaggggcagatctatgaagctgaaatctctgttagtgagggaagcctcttc
agcactaatcctgaccagtacttccgacaggtctacactctggaggaggaatcgggacct
gccccagtctgctgcttggagattgaacgagggatagaagggaaattttttattatagcc
accactcgaaagagactcttccagtttgttggcaaagtacctgaagggacggagcagcaa
ggcttcagctccatatttgctatgcatgctgaccatttgcccagctttcgggagtttccg
gccaactttggtttcagtgagatagccttttacaccccaaagctgcgctcgaacccacgc
tcttttgcctggatgatgggaaatggtgttttatatggtacattggattatagccgccct
gattcaattttgagtgatgaacgggtctgggtttatccttctgatattgacataactgtg
aacaagccgatatccattgtacttacccagttccacttcctgttgctgttgcctgatcgg
gtgaaggctgtgtgcactctgaatgggcaggttgtttttcaagatctgttcctggagaag
tttggcttactgacacgcatgatcaaagatcctacagtccagcagatatggatccacact
gagaaagtagtgttccgttaccacgtccagcgggaatctagagatgtgtggaagatgtat
atgaatatgaacaaatttgatttagccaaagagtattgtaaagaccgtccagagtgccta
gatattgtgctggcaaaagaggcagagcactgcttccaaaacaagaggtatctagacagt
gccaaatgttatgctctgacccagaactactttgaggaaattgcccttaagttcattgaa
gccaagcaagaagaggccctgatggagtttctgattaagaagctgagtaacctaaagcct
tctgagaagacacagaccactctgctgaccacatggttaacggagctgtacctgaactgg
ctaggtatactggaaggagatccctcacagcgaaatctctatttggatacccgggagaaa
tttcgcactttcctgagcagtcctaaaaacaaagactgtttatttaataaccgggcatct
atttatgagctgttggcaagccacggggacacagagcacatggtctactttgcagtcatc
atgcaggactatgagcgcgtagtagctcaccactgccagcatgatgagtatgatgaagct
ctaaatgtgctgtccaggcacagagatgagaagctgttctacaagttctctccagtcctc
atccagcatattcccaagaaggtagttgatgcttggatttctatgggctctagactggat
gccaggaacctcattccagcccttgttaactacagccagagtgccagcacccagcagatc
aatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccagcaagcc
attcacaactacctgttgtctctttatgctttgtgtcggccagactcgctactgtcatac
ctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtatgcattgcgc
ctgtgtgcagagcatgggcaccaccaggcatgtgtccatatttacaaagtgatggaatta
tatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcctgtgca
gatctccctgaagatgatgaggagctccggaagaagctctggttgaagattgctcgccat
gttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgtgccctg
ctgaagattgaagacgtcctgccattctttccagactttgtcactattgaccatttcaag
gaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaaagggag
atggaggaagccacacagagtgccaagagaatccgagaggacatccaggaaatgagaaat
aagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccccttctaaac
cgccctttttaccttttcctgtgtggtcacatgtttcattatgactgtcttctccaagca
gttttcccaaaccttcctgcttacaagcaggcaaaacttgaagatcttcagaagaagctg
gccgctaccagtcagccttccaagagccaccatcgtcccaaggatgcagataccattagc
ttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatattgtggca
gctgaatgtgtgtactgtggtgagctgatgatccgctccattgacaagccttttattgat
ccccaaaagtatgaagaggagatgcaaagctggctgtag
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