Charadrius vociferus (killdeer): 104296047
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Entry
104296047 CDS
T08577
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104296047 (TOPORS)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104296047 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvf03037
]
104296047 (TOPORS)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104296047 (TOPORS)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104296047 (TOPORS)
UBL E3 ligases
104296047 (TOPORS)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
104296047 (TOPORS)
Cilium and associated proteins [BR:
cvf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104296047 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
104296047
NCBI-ProteinID:
XP_009894172
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MTSADKFSEDSNFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEW
SKNKAECPLCKQPFFSIFHTIRAEDDFKEYILSPTENSSFSSPNGRRFRYRTTLTGERRS
GSYPSRRTLSPPDNGILFEGLSSEPVRQRDDEIQQMIRRLASRRQASAEGRSLRQIQEED
MINFRRALYRTGVRIRSIQDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSL
VNIVQHIIMSNVTRYDLESQAFADDLKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANY
DCPAPSYDEGSQSNSSIITISPDMAYSQGPDNSLSVTGLDQAPWDDETPGPSYSVSEEVR
ATIASPLEMSESSDEDSATRSRRSKGQTQLQANADSNNSDSSSDNCVIVGYVKPLAERTP
EVVELSSDSEESIREEKKEEVKKQQAIQCRSWSDSESSRSFSPHCPTYKEDVGSFRSCLS
PGIEKAESKDDEKDKGKVKDLSPQHLSWSPSPGSDTICSPWNHRLSRKRKSRSPQSCSRS
SRGSHGHRSRKEHRSKSHFKRKRSRSRDSSKHRSKRSSRKSRAHDLRASLKTQRGSLSRE
STPSREVSRSRSRSKGHGKKRSRSRDGDRYYVRDSYESRYQWGYAFCSRKAFGDGCESSS
RRRTQSSASCLRQSASPEYRIRSYIEKTDPRSQKGGHERHYYCYERCRSRSRSSDRSRTP
SGGTDRMKSEKPGGKRKYKTRHLENTFMESTSVERENDPKKTVSKFSDCYKNEDSHSDNR
ATGETKHKKKKKKIRSPSVEIVYEGKATDTTRHLKKKKKKHKKKHRKHHMSNSSHSSPVV
ITIDSDSSKEPESIECDSSINWTGITLRKERENESPSSFVGRTGCEDVYKLGEETEGAAK
KYSLPTRRGHLDSDIKNADVKIQETAADQGLTTADTSSNTPHTETVTSYIQEAPASPSSQ
LPSPRISFLDCPERRPLILTLPKRLVNRSSWFDFPEEKM
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagcagataagttttcagaagatagcaacttttcgccaaaagccagcacaagc
aagctgccaacagatgcatctcctgactctaaatgccccatctgcttggatagatttgac
aatgttgcatatctggatcgctgcttgcataggttctgtttccgctgtgtccaggagtgg
tcaaaaaacaaagcagaatgccctctctgcaagcaaccctttttttccattttccataca
attcgtgctgaagatgactttaaggaatacatactcagcccaacagaaaacagctctttt
tccagccccaatggccggagatttcgttaccgtaccactttaacaggggaacgccgctct
ggcagttatccttcccgaaggacgctgtcccctccagataacgggatattgtttgaaggg
ttgtcgagcgaaccagtgcggcagagagatgatgagattcagcagatgataaggaggctg
gcctcaaggaggcaggctagcgcagagggcagatctctgcggcagattcaggaggaggac
atgatcaacttccgcagagctttgtaccgtaccggtgtgcgcattcgtagcattcaggat
ggtggccgctatcgagatatttcagcagaatttttccgccgcaaccctgcttgccttcac
agattggttccttggttgaagcgagaacttacagtcctgtttggtgcccatggatctttg
gttaatattgtacagcacattatcatgagtaatgtgactaggtatgatctggaaagtcag
gccttcgctgacgatttgaagccctttttgctgaatcggactgaacacttcttacatgaa
ttcatcagttttgcccgttgtcctttcaacttagaagcatatgatcaacacgccaattat
gactgtcctgcaccatcatacgatgagggaagccagtccaactcctcaattattacaata
tctccagatatggcttattctcaggggccagataacagtttgtctgtgactggtcttgat
caggccccctgggatgatgaaactccagggccttcctattctgtttcagaagaggttcgt
gcaaccatagcttctcctctggagatgtcagaaagttctgatgaggactctgctacaagg
agtcgaagaagcaaagggcagactcagttacaggctaatgcagactccaacaacagtgac
tcttcctcggacaattgtgttattgttggctatgttaagccattagctgagaggacacca
gaagtggttgaattgtcgtcagactctgaggagtccatcagggaagagaagaaggaagag
gtgaagaaacagcaggcaatccagtgtcgcagctggagtgatagtgaatcaagcaggagt
ttctcgccacattgccccacgtacaaggaggatgtaggtagttttagaagctgcttgtct
cctggaattgagaaggcagagtccaaagatgatgagaaggacaaaggtaaggtaaaagat
ctgtctccacagcacttgagctggagcccctctccagggagtgacacaatatgctcccct
tggaatcacagattgtctagaaagaggaagtccaggagcccacaatcctgttcacggagc
agtcgaggcagtcatggccatcggtctaggaaggagcatcgtagcaaaagccattttaaa
aggaaaagatcgagaagcagagatagtagcaagcacaggagcaaaagaagtagcaggaag
tcaagggctcatgacctcagagcctctctaaaaacccagagaggctctctaagtcgtgag
agcactccatccagagaagtaagcagatcacgatcacgtagcaaaggccatggcaaaaaa
agatcaagaagtagagatggtgatcgttactatgtaagagacagctatgaaagtagatac
cagtggggttatgctttctgtagtcgaaaagcatttggagatggctgtgaatcctccagc
aggcggagaactcagtctagtgcttcctgcttgaggcaatctgctagtccagaatacaga
atacgatcatatattgaaaagacagatccgcgtagccagaagggggggcacgagagacac
tattactgttatgaaagatgcaggtcaaggagtcgatcaagcgacaggtcaaggacccct
tctggaggaaccgatagaatgaaaagtgaaaagcctggtggaaaaaggaagtataagact
cgccacttggagaatacattcatggagagcacaagtgtagaaagagaaaacgaccccaag
aaaactgtctcaaaatttagtgattgctacaaaaacgaagatagccattcagacaatcga
gcaactggtgagacaaagcataagaaaaagaaaaaaaagattaggagtccaagtgtggag
atagtctatgaaggaaaagcgacagatacaacaaggcatcttaaaaagaaaaagaaaaag
cataagaagaaacaccggaaacatcacatgagtaactcatcacattcttctccagtggtg
attacaattgatagtgatagtagcaaggagccagaaagtatcgaatgtgacagcagtatt
aattggacaggcataactctgagaaaggagagggaaaatgagtctccatcttcttttgtg
ggaaggacagggtgtgaagatgtttacaaacttggtgaggaaactgaaggagcagccaaa
aagtacagtcttcctaccagaaggggacacttagacagtgacattaaaaatgctgatgtc
aaaattcaagaaacagcagctgatcagggtcttaccacagcggataccagcagtaacacc
cctcatacagaaactgtaaccagctacattcaggaagcaccagcatcgccttccagtcaa
ctgccttcccccaggatttccttcctagactgtccagagagacgaccgttgatcctaaca
ctgccaaagagacttgtcaacagatcctcttggtttgacttcccagaagaaaaaatgtag
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