Cyprinodon variegatus (sheepshead minnow): 107080723
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Entry
107080723 CDS
T06110
Name
(RefSeq) uncharacterized protein LOC107080723
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107080723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107080723
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107080723
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107080723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
KH_DTX3L
zf-RING_4
FYVE_2
zf-RING_11
Siva
RING_XB3-XBAT31
zf-RING_5
Baculo_IE-1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107080723
NCBI-ProteinID:
XP_015224415
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
ANELQKLQGETLMKDGTEVTILSVSFGAPKMDAQTADGASANTAPPAALKSSKPSVSEQT
VVEMQTEEQMDVGGNAPRDHRKKSMECVVPVAHYWYVSQIYKDEIRRIEKETKVSIMPTV
TVAFNTEHEGGNPSEALNRFADLVQNCLSDSTSSVIPLKSVDPNRWGDALKVINNNDSKL
LVTMSSEEMTFCGPQLYKNFLSSTLNASQNFNSPEEPARSARSQNLNEELRLKIKMTIKD
NLTDTGLTIAENSWKRFISSYDNKLAKIKAKFNVDFNVSTISGGKVNVKAFYKRPGENPA
MESHAVRALLRLYQKIMMSPIKQPPPYGATGLSGSEEASSRARLNGHSTQNSKESARGGA
TGDSKDDQCCICMSEFTNKQQLKCKHAFCKDCLQKAVQHSGPICPICKDVFGLVKGNQPD
GTMKWKKHKYIDLPGFPGCGHIEITYNIPTGLQKKNHPNPGQYFAGTTRTAYLPGNKEGN
EVLHLLEKAFEHKLIFAVGASRLSGWENRVTWNDIHHKTSMTGGPECYGYPDETYLSRVK
EELKAKGIE
NT seq
1652 nt
NT seq
+upstream
nt +downstream
nt
ttgccaatgaacttcagaaactacagggtgaaacattaatgaaagatgggacagaagtca
ccattctttcagtcagttttggagcaccgaagatggatgcacaaactgcagatggtgctt
cagcaaatactgctcctccagcagctttaaaaagctccaaaccttcagtgtcagagcaga
cagtggtggagatgcagacagaagaacagatggatgtgggaggaaatgctcctagagacc
atagaaagaaatctatggaatgtgttgtcccagtggctcattactggtatgtgagccaga
tctacaaagatgaaatcagacgcatagagaaagaaactaaagttagcataatgccaactg
tcactgtggcatttaacactgaacatgaaggtgggaatccaagtgaggctctcaacaggt
ttgcagatctcgtccaaaattgtttgtctgattccacttcctcagttattcctctgaagt
ctgtagatcctaatcggtggggtgatgcactgaaagtcattaataacaatgacagcaagc
ttttagtcaccatgtcctctgaggaaatgactttctgtgggccacagctttataaaaatt
ttctcagttcaactttaaatgcatcacagaatttcaactctcctgaagagccagctaggt
cagcaagatctcaaaacttaaacgaagagctccgcctgaaaatcaaaatgacaatcaaag
ataatctgaccgatacaggactaaccatagctgagaactcatggaaacgcttcatctctt
cctatgataacaaacttgcaaagatcaaagctaagttcaatgtggactttaacgtatcca
ccatcagtgggggcaaagttaatgtcaaagcgttctacaagagacctggagaaaacccag
ccatggagagccatgctgtcagagctctgctgcgtctgtaccagaagattatgatgtcac
ccatcaagcagcctccaccttatggtgccactgggctcagtggttctgaagaggcttcca
gcagagctagactgaacggtcattcaacacagaacagcaaagaatcagctagagggggcg
ctacaggtgacagcaaagatgaccaatgctgtatatgcatgtctgaatttactaataagc
aacagctgaagtgtaagcatgcattctgcaaagactgcctgcaaaaggcagtgcagcaca
gtggaccaatctgtcctatatgcaaagatgtgtttggtttggtcaagggaaaccaacctg
atggaacaatgaaatggaaaaaacataaatatatagacctccctggattcccaggctgtg
gccacatagagatcacctacaatatccctacaggattacagaagaaaaatcatcccaacc
ctggacagtactttgcaggaaccactagaacagcatatcttccaggcaacaaggagggga
atgaagttctgcacctgctggaaaaagcctttgagcacaagctgattttcgctgttggag
cttctaggttatcaggttgggagaatagagtgacctggaatgatatccatcacaagacat
ccatgacaggaggaccagagtgttatggatatcctgatgagacctacctgagcagagtca
aggaggagctgaaagctaaaggcattgagtga
DBGET
integrated database retrieval system
