Cyprinodon variegatus (sheepshead minnow): 107080742
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Entry
107080742 CDS
T06110
Name
(RefSeq) nucleolar transcription factor 1-like
KO
K09273
upstream-binding transcription factor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107080742
03021 Transcription machinery [BR:
cvg03021
]
107080742
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
107080742
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
107080742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
UBM
HMG_WDHD1
NOA36
Motif
Other DBs
NCBI-GeneID:
107080742
NCBI-ProteinID:
XP_015224435
Ensembl:
ENSCVAG00000000774
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MNGSSSVSAAQSVRIKAEADEWTKDDCLTLLERIRSLLPDGDAMKYKTTESHFDWDKVRF
GSFTGDMCRQKWLKVSSEVRKYRTMTELLVDAMELVKNPYKGKKLKTHPDFPKKPLTPYF
RFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKVWTGTRTHLLQVPGFNGLLQIP
GSDPLLQVPGSNGPSSSRNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMLTQKEKDMFQ
KRCEQKKKQYDIDLQRFLESLPEEERERVLSEEKMGGSKLNVSQHRAKSPSLKERSREPE
LETWIPAGSPKDRRDGKKTVKLPETPKTAEEMWQHSVIGDYMAKYRSDRRKAQAAMDAAW
RSMEKKEKIPWIKKAAEDQKRYEVQYQSVRELLEMRTPAAGQRKPKFDGEPKKPPVSGYQ
MFSQELLTNGELNHFSLKERMVEIGKRWQKLSQSQKDKYKKLVEEQQVEYKVELEAWVKS
LSPQDRAIYKEFSSSKRRSTTKATSSPVAKVHVTAKGKAGGSRAVNPGVGVGRRAMAYRA
KKDMSDSDEEEEKSNSSDSDEDDETSGSTDSEDEDENDDEEEDDDDQSSSEESSELDSD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagcgtctctgcggcccaaagtgtgcggatcaaagccgaagcagat
gagtggactaaggatgactgcctgaccctgctggagcggatccgcagcctgttgccggac
ggagacgccatgaagtataaaaccacagagtcgcacttcgactgggacaaggtccgcttc
ggcagcttcaccggggacatgtgccgccagaagtggctgaaggtgtcctctgaggtgcga
aagtatcgaacgatgacggagctcctcgtggacgccatggagctggtgaagaacccgtac
aaaggcaagaagctgaagacccacccagacttccccaagaagccgctgacgccctacttc
cgcttcttcatggagaaacgggccaaatacgccaagatccaccccgagatgagcaacctg
gacctgaccaagatcctctccaagaagtacaaggagctgcccgaaaagaaaaaggtttgg
accggaaccagaactcacctgctacaggtcccgggttttaacgggctgctacagatcccg
ggttctgacccgctgctacaggtcccgggttctaacgggccgtcttcttccaggaacggc
tactcgctgtactgcgctgagctgatggtgaacatgaaggacgtccccagcacggagcgc
atggtgctctgcagcaagcagtggaagatgctgacccagaaggagaaggacatgttccag
aagcgctgcgagcagaaaaagaagcagtacgacatcgacctgcagcgcttcctggagagc
cttcctgaggaggagcgcgagcgagtcctatcagaggagaaaatgggcgggtccaagttg
aatgtgtctcaacacagagcaaagtctccatcactgaaggagcgcagtcgagagcccgag
ctggagacctggatacctgccggatcacccaaagacagacgagacggaaagaagacagtg
aagcttccagagacgccaaaaaccgctgaggagatgtggcagcatagtgtgataggagac
tacatggccaagtatagaagcgaccgcaggaaggcgcaagcagctatggacgcggcctgg
aggtctatggagaagaaggagaaaattccctggattaagaaggcggcagaggaccagaag
cgttacgaggttcagtaccagtctgtgagggagctgttggagatgcgaacaccagctgca
ggtcagaggaaacccaagtttgatggggaacccaagaagcccccagtgagcgggtatcag
atgttctcccaggagctgctgacaaacggagagctgaaccacttcagcctgaaggagcgc
atggtggagatcgggaaaaggtggcagaagctgagccagagtcagaaggacaagtacaag
aagctggttgaggagcagcaggtggagtacaaggtggaactggaggcctgggttaagtcg
ctttcccctcaggatcgagccatctacaaggagttctcctcctcgaaacggcgcagcacc
accaaggccaccagcagtcccgtggctaaggtccacgtaacagccaaggggaaggcagga
ggctcaagagcggtgaatccaggggtcggagtgggtaggagggccatggcgtaccgcgct
aagaaggacatgtctgactctgacgaagaggaggagaagagcaactcctcggactctgat
gaagatgatgaaacatcaggaagcaccgacagcgaggacgaagatgagaacgatgatgag
gaggaggatgacgacgatcagtcctcctccgaggaatctagtgagttggactcggattag
DBGET
integrated database retrieval system
