Cyprinodon variegatus (sheepshead minnow): 107080838
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Entry
107080838 CDS
T06110
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107080838 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107080838 (gtf2f1)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107080838 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
107080838
NCBI-ProteinID:
XP_015224527
Ensembl:
ENSCVAG00000013665
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MTSLSGGGSSTTEYTVRVPKNTSKKYNIMAFNAGDRVNCSSWTQARMERDMSARRIYGEE
EIPESGAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGIKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTQQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLRESERGEDDDDETEKGGKKKKKGRGKSGDFLIHGLEDDLEMSSDDSDSSMGDDGESKA
KTKKDLGKGKGKKKKQKGHDKEALEDSDDGDYEGLEVDYMSEESSSDDEPVNEKVSKAEE
HPKGIDEMSESEEESEEEKQNEDEAKEEEEEEEGKKTPVQMEKKKKKDSSGESDSSDDSD
IEKETASALFMKKRTPPKRPGGRGSTGSSRTGSRPGTPSIDSASTSSTLRAAASKLEQGK
RQIQAAATDSPAAKRLKMEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLNEDAVRRYLIR
KPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKMVNDKMHFYLTE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcattgagtggcggaggttcctcaaccacagagtacactgtgagagtccccaaa
aacaccagcaaaaagtacaatataatggctttcaatgcaggtgacagagtcaactgttca
agctggacacaggcacgaatggaaagagacatgagcgctcggcgaatatatggggaagag
gagatacctgagagcggtgctggcagtgagtttggcaaaaaacagcgagaagaggccagg
cgaaaaaagtttggaatagtgacccgagagttcaaagtggaagaccagccttggatcctt
aaggtcaatgggaaagctgggaaaaggttcaaaggtataaagaagggtggagttacagaa
aacgcatcctactacatttttacacagtgtccagatggagcttttgaagcctttccagtt
catgggtggtataactttacacagcaggcgaagcatcgaactttgactgctgaggaagct
gaagaagagtggggcaggcggaacaaggttgtaaatcatttcagcattatgcttcagaga
cgcctacgggagagcgagcgcggtgaggatgatgacgatgagacagaaaagggtgggaag
aagaaaaagaaggggaggggaaaaagtggcgactttctcattcacggccttgaggatgac
ctggagatgagcagtgatgacagcgacagcagcatgggagacgatggagaaagcaaggca
aagacaaaaaaggatttgggaaaagggaaaggaaaaaagaagaagcaaaagggccacgat
aaggaggcccttgaagacagtgatgatggagattatgagggcctagaagtggattatatg
tcagaggaaagcagctcagacgacgagccggtaaatgaaaaggtcagcaaagcagaagag
catcctaaaggcatagatgagatgtcagaaagtgaggaagagagcgaggaggagaaacaa
aacgaagatgaagccaaagaggaggaagaggaggaggaaggcaagaaaaccccagttcaa
atggaaaagaagaagaaaaaagacagcagcggagaatcggacagctctgatgacagtgac
attgagaaggaaaccgcttctgctttgtttatgaagaaacgtacacctcctaaacggccc
ggtggacggggctccacagggagctccaggacgggcagtcgtccggggacgccatccatc
gactctgcctccacctccagcacgttacgtgctgctgccagcaagttggagcaagggaaa
agacagattcaggctgcagctactgactcaccagcagccaaaaggctgaagatggagccc
agcagtcagagcccagtcccctctgggaagagcacacctcaacccccgtcagggaaatcc
actccaagctcaagtgatgtgcagttaaatgaggacgctgtccgccgctacctgattcgt
aagccgatgaccaccaaagaccttctgaagaagttccagacgaagcgtacaggtttgagc
agtgagcagacagtcaacgtgctcgcacagatcctgaagcgcctcaatccagagcgaaag
atggtcaacgacaaaatgcacttctacctcacggagtaa
DBGET
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