Cyprinodon variegatus (sheepshead minnow): 107080868
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Entry
107080868 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like
KO
K10654
tripartite motif-containing protein 55
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107080868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107080868
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107080868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
MTCP1
Sina_RING
zf-RING_10
zf-Nse
DUF1415
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107080868
NCBI-ProteinID:
XP_015224559
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQAANPYLSTRSGSTVTSGGRF
RCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQGSSRYPGTPVCESEPVQRSRTLTCCQ
NIYRKRRPDVLAEDEGERSETWMNKEMNPCALCVLAMQAELTDCISMLVGNNERIQAIIS
QLEETCRAVDENGRRQKSKVCETFDHLFTLLEEKKAEMTVRINSEQEEKLDYIRSLNRKY
GEHLEGTAKLVETAIQTMEEPEMAVFLQTAKPLLQKLLTSTDTSHLDQVQPGYEDMGHFT
VNFDLQRRALAEVDFIKGDEDDDDSEEEVEAGGPRPGSSESQPQATPVPPLATPLQRAPD
PLPPPPPTQAPPPLPPPTTSSAPQTDQQSESDPDGPKHVFSFSWLNNK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagagtctggagaagcagctcatctgtcccatctgtctggagatgttcaccaagccc
gtggtcatcctcccctgtcagcacaacctgtgccgtaagtgtgccaacgacgtcttccag
gcagccaacccctacctgtccaccaggagcggctccacggtgacctcaggggggcgtttc
cgctgcccgtcctgcagacatgaggtggttctggaccgacacggcgtgtacgggctgcag
aggaacctgctggtggagaacatcatcgacatgtacaaacaaggcagcagcaggtaccca
ggaactcctgtctgtgagtcagaaccggttcagagatccagaactctgacctgctgccag
aacatctacaggaaaagaaggcctgatgttctggcagaagatgagggtgaaaggtcagag
acatggatgaacaaagagatgaacccatgcgctctgtgtgtgcttgccatgcaggctgag
ctgacggactgcatctccatgctggtggggaacaacgagaggatccaggccatcatcagc
cagctggaggagacctgcagagccgtggacgagaacggccggcggcagaagtcaaaggtg
tgtgagacattcgaccacctgttcactctgctggaggagaagaaagccgagatgacggtc
aggatcaacagcgagcaggaggagaagctggactacatccgcagcctgaacaggaagtat
ggagaacatctggagggaactgccaagctggtggagacggccatccagaccatggaggag
ccagagatggccgttttccttcagacagccaagcctctgctgcagaaactgctcacgtcc
acagacacgtctcacctggaccaggtccagcccggctacgaggacatgggccacttcacc
gtgaactttgatctgcagcggcgggcgctggccgaggtcgacttcatcaaaggcgatgaa
gacgacgatgacagcgaggaggaggtggaggcaggaggacccagaccgggatcctccgag
tcacagccacaagccacgccggtgccgcccctagccacgcctcttcagagagccccagat
cccctcccaccgccaccacccactcaagccccacccccactgcctccccccaccaccagc
tccgcccctcagacggatcagcagagcgagtcggacccagatggacccaaacacgtcttc
tccttcagctggctcaacaacaagtag
DBGET
integrated database retrieval system
