Cyprinodon variegatus (sheepshead minnow): 107080976
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Entry
107080976 CDS
T06110
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107080976 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107080976 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107080976 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
MINT_RAM7
DUF948
Motif
Other DBs
NCBI-GeneID:
107080976
NCBI-ProteinID:
XP_015224675
Ensembl:
ENSCVAG00000000081
LinkDB
All DBs
Position
Unknown
AA seq
3263 aa
AA seq
DB search
MDRLLHLSLLVLIDALLWQCCHTQQRGLFPAVLNLATMADITTNATCGENGPEMFCKLVE
HVPGQPVRNPQCRICNQQSPNPVEHHPIEYAIDGTNRWWQSPSIRNGMDYHYVTITLDLK
QVFQVAYIIIKAANSPRPGNWILERSIDGVTFEPWQYYAITDTECLTRFNINPRTGPPSY
TRDDEVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPTLLNFTSARYIRLVFQRIRTL
NADLMTLTLRDPKDIDFIVTRRYYYSIKDISVGGMCICYGHAKACPLNPDTKKFSCECEH
NTCGESCDHCCPGYHQQPWMAGTFLTRHVCEKCNCHNKAEECYFNQTVADLSLSLDIHGQ
YRGGGVCTGCRDNTAGINCQSCISGYYRPSTVSPDEEDPCIPCSCDPHGSISQTCVADES
QASPGQPAGSCWCKEGFGGLRCDRCAIGYMGYPNCERCNCSVEGSINSDPCVTPCICKEH
VEGENCDRCKLGFYNLQGSNRRGCEKCFCMGIASQCSSSTWNFGKVTTLAGWHLLGETGG
RVWPVHRETPSYLTVRHSDIMNNLGSAYYWNAPEVYLGNKISAYGGDVVFTVSYTTHEQE
QENIRVTSEPDLIIEGGGIKLIDKRFGQPVYPSSTSTKHIVLLPENFLVSEIEQPISRRD
FLLVLANVTSLMVRASYSTEMSAVYRLNSFSMQVADSSASGKIASAVEMCDCPPGYGGLS
CETCLPGFRRVHGKLYNGVCEPCQCHGHSLHCHEFTGNCLDCIHHTTGHQCDTCLPGYYG
NATHGTPQDCQPCACPLTLPSNNFSPTCHLGEGGELLCDRCQPGYTGPRCDRCSNGYYGQ
PNVPGESCQPCNCNGNLDLSVPDSCDPITGQCLRCRQGYDGLTCDTCSDGYYGDAITLKN
CQPCHCHTNGSLSEVCDKETGQCQCRENVVGLQCDKCKANWWWDVELQECMPCRCSPYGS
TSQRCDTEGRCICRPGFVGRRCNLRRLGYERRETRRPIESLPIEAVQQRWGGTSRTSGGC
PRGAYRPQTGAQTHGVTTGGVCVPCHCNSFGSKSFDCDEMGQCRCQPGVTGPKCDRCSRG
FFNFQEGGCTPCQCSHVGNNCDANTGQCICPPNTIGERCDRCAPNHWGHDITTGCKECGC
NGIGSETQQCNVNTGCCKCRASFRGEKCDECQIGYRDFPQCIPCECSVAGSDCETCDREK
GVCACADRTGKCSCKENVEGHNCDQCKSDTFGLSEKNPLGCSKCYCYGLTRSCTEARGLI
RMLLTLRPEQTVLPLVDKSNTVEKRTGVSFQHPEILVHAELVAGALSEPYYWRLPEQFTG
SMITAYGGQLKYAVYYEARDETGPSSYEPQVIIKGGPNHNILITRHIPGLQIGQLTRHEI
DMTEHEWRYEDGRSMTREDFMDVLFYVDYILIKASHGSLMRHSRISEISLTVAEEGTPTE
LNEKAHQIEKCDCPTGYSGLSCEECAAGFYRLRYGSLVSVPASRVPTAAGMGSCVQCQCS
GHSSTCDPETSICQNCQDNTEGDHCERCAPGFYGVVRGSTDDCKPCACPLTNPENNFSPT
CVAEGFDDFRCTACPEGYEGKYCERCATGYHGNPTMPGGRCEECKCSSWGSLPGPCNPVT
GQCRCRDGASGISCDQCMDRHVCGASGIISCDDECSGLLISDMDRLYRIITEVTLTTPLP
PPYKVLYRFENMTDEIKHMLSPQKAPERLLQLADSNLGSLVVEMDQLHSRATKVSADGEQ
VDDDADRIHKRAQDLEQFIKDTLLGAKDLQFKAAELNRTLSRKDGTADKSLTEMKEEIQA
MLAEMRKRQLGGMKSIAEEEEDLAEELYQKVKRLFGDPHQATEDLKAEIKEKLSDHERKL
QEAQDLLHSAQGKTRQAGSLAESNKANLTLLQKKRDAVSGVKQDAQKILGEGNNLLDEAN
QLSDNINKELEELEGMERDLDPLHAQLDDKVQGLADGLSDGSVAEKVGEAEEHAKQLNES
AAILDGILAEAKNLSFNATAAVHAYSNIKANIDAAEKEAKAAKQNANEALSLVLGPDVPV
KEAAQIALQKSQILLNKAKQLQNDVKENADNVAGLKGRVKAARDKTKGLLTAVNGTLATL
NAMPNDTSSKLAATKAVAADANATAIDVLERLADLNLRLGNLQLNCSELEETVDAANQMI
QDPEKNTIIHAAGAKVKDLEDEADRLLEKLQPIKKLQDNLRRNISQIKELINQARKQANS
IKVSVSSGGDCLRSYRPDIRKGRYNTIILHVKTTTPDNLLFYLGSAKYVDFLALEMRKGK
VNFLWDVGSGVGRVEYPHHTIYDGNWYRIEASRNGLNGTISVYPLDGPMAGMMPTPASAN
SPTAYTILDVDQNAYLFVGGILGTAKKAEAVKTSTFTGCMGETFLDGKPIGLWNYRERQG
DCKGCVVSPQRTDGEGTVQLDGEGYAAVGRPTRWNPNVSTITLKFRTFSSDALLMYLATE
DMKDFLSLELSEGKVRVNFDLGSGVGSATSANRHNDGRWKALTMSRNKKQAVVIVVDISQ
GTEEKIVAISKGSATGLNLKENQKIYFGGLPTIGNYSMAARSEVILKRYAGCLKDIEVSR
TPYNLLSSTDYTGVTKGCNVEKLYTVSFSKPGYMELDGLSFAINTEISLSFSTLSDTGII
LLAVGGTSPISKEPRRPNLNSKRRRRQSGEPYLLVMLNKGSLEVLINTGSHTQRRVVRRP
DQGNLNDGREHSLRIERLAGRSFAVQVDEEPKREAGLPNDQPMRLRHIFLGGIPPEVERT
SNRVNIPFKGCIWNLMVNSILSDFSQPVSFENAEIGQCPNLAPPPPPPPLPEEEKTEEKK
MDLKPLHPTVPPAPGTPPPSGPEEATPPVPAAATPISPAAVATPTANLDPIIDPDSCASA
VAPTSLEKAYQFGLTRNSHMSFAFDDTKVRERLLLEFELRTKELSGLVLYMARINHADFV
SIQIKEGQACLGYDLGHGNISGCVPFSINDGNWHNIRVTRTKQRAVLAVERKYTKQLFSP
KTADLLDVVGMVYVGGLPQNYTTKRIGPIVYSINGCIRNLMMSGGPVSARSAPAVIEDFK
LDMSAPNSSHMVGRCFVATETGTYFDGSGYLKAVSSYRVGLDVSIALEFRTSKTSGVLLA
VSNQGNDGLGLEIVEGKLLFHVDNGAGRITAEHVPTGKSFCDGQWHSVTANKLRHRLELV
VDGEKSQAQSPNARSNTCDTNDPIYVGGYPAGVRQAALSTSSSFRGCMRNLKITKASKTM
DVQFNKALEIKGVQPLSCPAGSA
NT seq
9792 nt
NT seq
+upstream
nt +downstream
nt
atggatcgactacttcatctttccctactggtgcttatcgacgcgttgctatggcaatgc
tgccatacccagcagagaggacttttcccagctgtgctgaatctggctaccatggcagac
ataacaacgaatgctacctgtggtgaaaatggtccagagatgttctgtaaactggtggag
catgtgcccggtcagcctgtgaggaacccacaatgtcgaatctgcaaccaacagagtcca
aacccagttgagcatcatcctattgaatatgccattgatgggaccaaccgttggtggcaa
agtccatctattaggaatggaatggattaccattatgtgacaatcactctggacttaaaa
caggttttccaggttgcttacataataatcaaggcagccaactctcctcgtccaggtaat
tggatcttggagcgttcaatagatggagtgacttttgaaccttggcagtactatgccatc
acagacaccgagtgtctgacaaggttcaacataaatccgcggacaggacctccatcttac
actagagatgatgaagtgatctgcacgtcgttttattcaaaaattcatcctctggagaac
ggagagatccacacatctctgatcaatgggcggcccagtgcagatgacccatctccaacc
ctgctaaactttacctctgcccgctacatcaggttggttttccagcgaatacgaacgctg
aacgccgacctcatgactctgacactcagggaccccaaagatattgatttcattgtgaca
agacggtattattattccattaaggacatctcagttggagggatgtgtatctgttatggc
catgccaaagcgtgcccactcaaccctgatacaaagaagtttagctgtgaatgtgagcac
aatacatgcggggagagctgtgatcactgttgcccgggttaccaccagcagccatggatg
gcggggaccttcctcaccagacatgtctgtgaaaagtgcaactgccataataaggcagag
gagtgctactttaatcagactgtggctgatctatcactaagccttgacattcatggtcag
tatcgaggtggtggcgtctgtactggctgccgggacaacacagctggaatcaactgtcaa
agctgcatttctggttactacagaccttcaacggtgagtccggatgaggaggacccctgc
attccatgctcgtgtgatccacatggttctatcagccaaacttgtgttgcagatgaaagc
caagcttcacctggtcagccagcagggtcatgctggtgtaaggaaggtttcggaggtctg
cgatgtgacaggtgtgctattggatatatggggtacccaaactgtgagcgctgtaattgc
agtgtggaaggaagcatcaactccgacccgtgtgtgaccccatgtatatgcaaggaacat
gttgaaggagagaactgtgatcggtgtaaacttggtttctacaatctgcaaggtagtaat
cgacgtggctgcgaaaaatgcttctgcatgggcattgcaagccaatgctcgtcctccact
tggaactttgggaaggtgaccactctggctggctggcacctgcttggagagacaggaggg
agggtgtggcctgttcacagagagacaccttcttatctaacggtcagacactcagatatt
atgaacaaccttggctccgcctactactggaacgcacctgaagtatatctgggaaacaag
atttcagcctatggaggagatgttgtattcactgtgtcttatacaacacatgaacaagag
caagagaatatcagagtcacctcagagcctgaccttatcatagagggaggtgggatcaag
cttatagacaaaaggtttggccaaccagtatatccatcctcgacaagtaccaaacacatt
gttctccttcctgagaacttccttgtctcggagattgagcagccgatcagtaggagagat
ttcctgctagtgctggctaatgtgacgagtttaatggtgcgggcctcatacagcacggaa
atgagcgccgtctacaggcttaactcattctcaatgcaggtggcagattcttctgccagt
ggaaagatagcatcagctgtagaaatgtgtgactgccctcctggatatggaggattatct
tgtgagacctgtctccctggttttcggagggtccatggtaaactgtataatggtgtgtgt
gaaccttgccagtgtcacggacacagtttgcattgccatgagttcacagggaattgcctg
gactgcatccaccacaccactggccatcagtgcgatacttgtctacctggttactatggc
aatgccacccatgggacacctcaggactgtcagccatgtgcttgcccacttactcttcct
agcaacaactttagccccacatgccaccttggtgaaggaggagagctgctctgtgaccgc
tgtcagcccgggtacacagggccaagatgtgacagatgttccaatgggtactacggccaa
cctaacgtaccaggagaatcctgccaaccctgcaattgcaatggcaatctggacctttct
gtaccagacagctgcgatccgatcacaggtcaatgtttgaggtgtcgccagggttacgat
ggcttgacttgtgacacctgcagtgatggttactatggagacgccatcactttaaagaac
tgtcaaccctgccactgccacaccaatggttctctatcagaagtttgtgacaaggaaact
ggtcaatgccagtgcagagaaaatgtagtcggacttcagtgcgataagtgtaaggctaac
tggtggtgggacgttgagctccaggaatgtatgccctgccgctgcagtccttacggctcc
acgtctcagcgctgtgacacagagggccgctgcatttgccgacctggctttgtcggccga
cgctgtaaccttcgtcgcctaggttacgagaggcgggagacgcggcggcctattgagagt
cttcccattgaagctgtgcagcagaggtggggggggacctcccgcacatcagggggttgt
cccaggggagcttacagacctcagacaggggctcagactcatggtgtcaccacaggtgga
gtgtgtgttccatgtcactgcaactcattcggctcaaagtctttcgactgtgatgaaatg
ggtcagtgtcgttgtcagccaggtgtcactggacccaaatgtgacagatgctcaagagga
ttcttcaacttccaggagggcggctgcacaccctgccagtgcagtcatgtgggaaacaac
tgtgatgcgaatactggacagtgcatctgccctcccaacacaattggtgagaggtgtgac
cgctgtgcacccaaccactggggccatgatatcacaactggatgtaaggagtgtggctgc
aatgggatcggctcagagacccagcagtgcaacgtgaacacaggctgctgcaaatgtcgc
gcttccttcagaggagagaaatgtgatgaatgtcaaatcgggtacagagacttccctcag
tgtattccgtgtgagtgcagtgttgcaggttcggactgcgagacctgcgaccgggagaaa
ggagtatgtgcctgtgcggaccgaacaggaaaatgtagctgcaaggaaaatgtggaagga
cacaattgtgatcaatgtaagtcagatacatttggactatctgaaaaaaatcctcttggc
tgcagcaagtgctactgttatggactaacacgctcatgcacggaggcacgaggactcata
aggatgttgttgacactgaggccagagcagactgtgctccccctggtggataaatccaat
actgtggagaagaggacaggagttagcttccagcaccctgagatccttgttcatgcagaa
ctggttgcaggggctttgtctgagccatactactggagattgccagagcagtttacaggc
tctatgatcacagcctatggagggcagctgaaatacgctgtgtactacgaggctagagat
gaaactggtccgtcatcctatgagcctcaagtcattattaaaggtggtccaaatcacaac
attctaataacccggcacatcccaggacttcagattggtcagctcactcgtcatgagatc
gacatgacagagcatgaatggaggtatgaagatggccggtctatgacccgagaggacttc
atggatgttttgttctacgtggactacatcctcataaaggcatcacatggcagtctgatg
agacatagccgtatttcagaaatcagcttaaccgtagcagaggagggaacgccgacagag
ctaaatgaaaaagcccatcaaatagaaaaatgtgactgtcccactggatactctgggctt
tcctgtgaggaatgtgcggcaggtttctatcgtctccgctatgggtcgctggtttctgtc
ccagcatccagagtgcccacagctgcaggcatgggcagctgtgtccagtgtcagtgcagt
gggcattcctccacttgtgaccctgagacttcaatatgccagaactgccaagacaacaca
gagggggatcactgcgaacgctgcgctccaggattctacggcgtcgtccgtggttctaca
gatgactgtaaaccttgtgcctgtccccttaccaaccctgagaataattttagccctaca
tgtgtggcagaaggttttgatgatttccgttgtacagcctgtcctgagggatatgagggg
aaatactgtgaaaggtgtgctactggttatcatggtaacccgacgatgccaggtggtcgc
tgtgaggagtgtaagtgttcctcgtgggggtcattaccaggaccatgtaaccctgtcacg
ggccagtgccgctgcagggatggggcttctggaatctcgtgtgaccagtgcatggatagg
catgtgtgtggagcttctgggataatctcctgtgacgatgagtgctcaggtttgctaata
agtgacatggaccgtctctatcgcatcatcaccgaagtcactctgactacaccccttcca
ccaccatataaagtcctgtaccgctttgagaacatgacagacgagatcaagcacatgttg
tcgcctcagaaagctccagagagattactgcaactggccgactccaacctgggatcactg
gtggttgagatggaccagctacatagcagggcgactaaggtgtccgctgatggcgagcag
gtagatgatgatgcagacaggattcataaacgagctcaggacctggagcagttcattaaa
gacacactgttgggagctaaagatctccaattcaaggctgcagagttgaacaggaccctc
tcaaggaaagatggaaccgcagacaaaagccttaccgagatgaaggaggagattcaggcg
atgctcgccgagatgagaaaacgacagctgggaggaatgaaaagcattgcagaagaggag
gaggatctagcagaagagttgtatcagaaagtcaaaagactgtttggtgaccctcatcaa
gccactgaggatttaaaagccgagatcaaagaaaagctgtctgatcatgagaggaaactc
caggaggctcaagatttactgcattctgcccaaggaaagacgaggcaggctggctcactg
gcagagagcaacaaagccaaccttactcttctacagaaaaagcgagatgcagtcagcggt
gtgaaacaagacgcacaaaagatccttggagaaggaaataatttactagatgaggcaaat
cagctttctgacaacatcaacaaggaacttgaggagttagaggggatggaaagagatctt
gatcctcttcatgctcagctggatgacaaagttcagggacttgctgatggcttgagtgat
ggtagcgttgcagaaaaagtcggcgaagcagaggaacatgccaaacagctgaatgagtct
gctgccattttagacggcattttggctgaagctaaaaacctgtctttcaatgcaactgct
gctgtccatgcttatagtaatattaaagccaatattgatgcagcagagaaagaggcaaag
gcagccaaacagaatgcaaatgaggctctgtcactggttttgggtccagatgttccagta
aaggaagcggctcaaattgccctccagaagagtcaaatactgctgaacaaagccaaacaa
cttcagaatgatgttaaagaaaatgcagacaatgtggcgggactgaaggggagagttaaa
gcagcgagagacaaaaccaaaggccttctgactgctgttaatggaaccctggctacactc
aacgctatgcccaatgatacatcatctaaattagcagctacaaaagcagtagcagctgat
gccaatgctacagcaatagacgtcctagagcgccttgcagatctgaacctccgccttgga
aacctgcagctgaactgcagcgagttggaagaaactgttgacgcagccaatcagatgatc
caggaccctgaaaaaaacacaatcatccatgctgcaggagctaaagtgaaggatttggag
gatgaagccgacaggctgctggagaagctgcaaccaattaaaaagcttcaagacaatttg
aggcggaacatctcacaaataaaggaactgatcaaccaggccagaaagcaagccaattca
atcaaagtttctgtttcatcaggtggtgactgtctccgtagttatcgccctgatatcaga
aaaggaaggtacaatactatcatccttcatgttaaaaccaccacacctgataacctcctt
ttttaccttggatctgccaaatatgttgatttcttggccctggagatgcgcaaggggaaa
gtgaatttcctttgggatgtgggttcaggtgtgggaagggttgaatatccccatcacaca
atctacgacggtaattggtaccggatagaagcgtctcgtaatggtctgaatggtaccata
tcagtctatcctttggacggtcctatggctggcatgatgccaacacccgccagtgccaac
tcacccacagcttacaccatcttagacgttgaccagaacgcctacctgtttgttggagga
attcttggcactgcaaagaaggcagaagcagtgaaaacatcaacatttacgggctgcatg
ggagagaccttcttggatggtaaacctattggtttgtggaactacagagagagacaggga
gactgcaaaggttgcgttgtcagtcctcagcgaaccgatggtgaggggacagttcagctg
gacggggaaggctatgctgcagttggacgaccaacaaggtggaacccaaatgtttccacg
ataaccttgaagttccgcactttctcctctgatgctttgctcatgtacctggccactgaa
gacatgaaggacttcctatctctggagctgtcagaagggaaggtgagggtgaattttgac
cttggatcaggggttggtagtgccacatcagctaaccgccacaatgatggacgctggaaa
gctctcaccatgtcaaggaacaaaaaacaagctgttgtgattgtcgtggatatcagccaa
ggtactgaggaaaagattgtggccatatccaagggttcggctactggtcttaatctgaag
gaaaatcagaaaatatattttggtggtctgccaacgattggaaactacagcatggcagcc
aggtcagaggtgattctgaaaaggtatgcaggttgtctcaaagacatagaagtctccaga
actccatataatcttctaagcagcactgattatacaggggttactaaaggatgtaatgtc
gagaaactctacacagtgagttttagtaaaccaggatacatggagctggatggcctttct
tttgcaatcaatacggagatcagcttgtctttcagcactctatcagacactgggattata
ttgctggcagtaggagggacttcaccaatcagcaaagagcctcgccgtccaaacttaaat
tcaaagagaagacgaagacagtcaggagagccctaccttttagttatgcttaacaaaggc
tctctggaggtcctcataaatactggcagtcatactcagcgtcgtgtcgtcaggcggcct
gaccaaggaaacctgaatgacggcagggagcattccctgcgcatagaaaggctggctgga
aggtcctttgcagtccaggtggatgaggaacccaagagagaagcagggcttccaaacgac
cagccaatgaggctgcggcacattttccttggtggtattccaccagaggtggagcggaca
tctaacagagtcaacatcccattcaaaggatgcatatggaaccttatggttaattcaatt
ctctcagatttctctcagcctgtttcctttgaaaatgccgaaattggtcagtgtccaaac
ctcgctcctccaccacctccccctcctctaccagaagaagagaaaacggaggaaaagaaa
atggatttaaaaccactccatcctacagtccccccagctcctggaacaccacctcctagt
ggtccagaggaggccacaccccctgtcccagctgctgccacacccatctcgcctgctgct
gtagcaacacccactgctaatctggatcccattatagacccggactcgtgtgcatcagct
gtggccccgacatcactcgaaaaggcatatcagtttggactgaccaggaatagtcacatg
agcttcgcctttgatgacactaaagtcagagagaggctgctgttggagtttgagctgagg
acaaaagagctttctggccttgtgctctatatggcgagaataaaccacgcagactttgtt
tccatccagatcaaggagggacaagcttgtcttggttacgatcttggtcatggaaacatc
tctggttgcgttcccttctccataaatgatggtaactggcacaatatccgtgtgacacgt
accaagcagagagctgtgctggcagttgagcgtaaatatacaaaacagttgtttagtcca
aagacggcggaccttttagatgtggttggaatggtgtatgttggtggattaccacagaat
tacaccacaaagcgcataggaccaatcgtctacagtattaatggatgtatccggaactta
atgatgagcggaggtcctgtcagcgctaggtcagctccagcagtaattgaagactttaaa
ctggacatgtctgcacccaactccagtcacatggttggacgatgttttgttgctactgaa
acaggaacctattttgatggctctggatatctgaaagcagtatcctcctatagagtgggt
ctggacgtgtcaatagcacttgagtttcgaaccagcaaaaccagtggagttctcttggca
gtcagtaaccaaggcaatgatggactgggtttggaaatcgtcgaaggcaagctgcttttc
cacgttgacaacggagctggcagaatcactgcagagcatgtgcctacaggcaagagcttc
tgtgatggccagtggcacagcgtcactgccaacaagcttcgccacaggctggagctggtg
gtcgatggggaaaagagccaagcacagtctccgaatgctcgctccaacacctgtgatacc
aacgaccccatctatgttggaggatatcctgctggagttcggcaggcagctctttctacc
agctcttccttcaggggctgtatgaggaacctgaagatcactaaggcttctaagaccatg
gatgtgcagtttaacaaggccctggagattaaaggagtccagcctctatcctgccctgct
ggatctgcctaa
DBGET
integrated database retrieval system
