Cyprinodon variegatus (sheepshead minnow): 107081104
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Entry
107081104 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107081104
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Gene silencing
Transposable elements
107081104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
Acetyltransf_18
Motif
Other DBs
NCBI-GeneID:
107081104
NCBI-ProteinID:
XP_015224803
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MACPFMDDPVDEEAVLLCRELHLRRERRVDFLSYPYPFLFERYRFSLQSIRYIQNLIHPX
IRNINHRGRALTSEQILCIALRFFANESFLYNIGDAEHISKATVCRAVRKVCLALKRFLR
IFVLFPGHKPVRVIKEEFHRIAGFRNVVGCIDGTHIPIIAPSENEADYVNRRSIHSINVQ
IICDAAHIITNVEAKWPGSVHDSRIYRESTLSNRLERGEIDGFLLGDRGYPCRPNLMAPY
PEPEPGPQQRFNVAHCRTRAQVEMTIGLLKARFQCLRHLRVTPERACDIIVACVVLHNIA
IIRGEQHPALQLQDPEE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtccttttatggatgatcctgttgatgaagaggctgtattactttgtagggag
ttacatttacgtcgggaaaggagagtggattttttgtcatatccctatccatttttattt
gagcgttaccgtttttctttacagtcaataagatacatccagaatctcatccatccttag
atcagaaacatcaaccatcgtggccgtgctcttacatctgagcagattctttgcattgcc
ttacgtttctttgcgaatgaaagttttctttataacatcggggatgctgaacatattagt
aaggctactgtttgcagagcggtaaggaaagtgtgcctcgctcttaagcgctttctgaga
atttttgtattgtttcctgggcacaaaccagtgagagtcatcaaagaggagtttcacagg
attgcaggatttcggaatgtggttggatgcatcgatggcacacatattccgatcattgca
ccttctgaaaatgaagcggactatgtgaacaggagatccatccacagtattaatgtgcag
atcatatgtgatgctgcacatataattacaaatgtggaggccaagtggcctggctctgtt
catgactcaagaatctatcgggagtcaaccctgagcaacagactggaaaggggagagatt
gatggctttctgctgggagataggggttacccatgccgaccaaatcttatggccccttac
ccagaacctgaaccaggcccacagcagcgctttaatgtggcacactgcaggacgagagcc
caggtggagatgaccataggcctgttgaaagcacgtttccagtgcctacgtcacctcagg
gtaacccctgaaagggcctgcgacattattgtggcatgtgttgttctccataatattgcc
ataattagaggggagcaacaccctgccctacaattacaagaccctgaggaatag
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