Cyprinodon variegatus (sheepshead minnow): 107081184
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Entry
107081184 CDS
T06110
Name
(RefSeq) tripartite motif-containing protein 35-like
KO
K12012
tripartite motif-containing protein 35
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107081184
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107081184
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
DDRGK
DNA_ligase_A_M
DUF5667
CSN4_RPN5_eIF3a
DUF4200
Motif
Other DBs
NCBI-GeneID:
107081184
NCBI-ProteinID:
XP_015224870
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
DQARFVERRTHEEFEKLHNFLRVEEESRMEALKRDEEQKTGEMRQMIETIKENISSMSET
IRVLMEEMALEDISVLHKCKSTLARANYPVADPVMAPAALIDVAKYIGSLTFQVWEKMQK
ITQYTPVTLDPNTAAPWLVLSDDLTSVHDSDEKQRLPNNPERFDPDTAVLGRHGLSSGKH
AWEVNVGDNTAWVVGVAKESIKRKEKVSSVLNNGYLCVYFYHKMYFAGTSPLTRLTLKRN
PQRIRVQLDCEKGKVSFYDPHNNAHIYTFKHAITEAVFPYLWVGCQKSPLKVEPVDVFLK
LAEFS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gatcaggcccgattcgtggaaagacggacacatgaggagtttgaaaaactccacaacttc
cttcgtgttgaggaggaatcgaggatggaggcgctgaaacgggacgaagagcagaagact
ggagagatgaggcaaatgattgaaacaatcaaggaaaatatatcgtccatgtcggaaact
atcagagttttgatggaggagatggctcttgaggacatctctgtccttcataaatgcaag
agcacgcttgcaagggcaaattatcctgttgcagatccagtcatggctccagcggcacta
atagatgttgccaaatacattggctctttaactttccaggtgtgggagaagatgcaaaaa
atcacccaatacactccagttactctggatccaaacacggcggccccatggctggtcctg
tcagatgaccttacctccgtccatgacagcgatgagaaacagaggctgcccaacaacccg
gagaggttcgaccccgacactgctgttcttggccggcacggcctgtcctcaggcaagcac
gcctgggaggtgaacgtgggagacaacacggcttgggttgtcggcgtggctaaggagtcc
atcaaaaggaaggagaaagtgtcttctgtcctgaacaatggctacctgtgtgtgtacttt
taccacaagatgtacttcgccggtacctctcctttgacacggctgactctgaaaaggaat
ccgcagaggatcagagtgcagctggactgtgagaagggaaaagtgtccttctatgacccg
cataacaacgcacatatctacaccttcaaacacgccatcactgaggccgtgtttccttac
ctctgggtgggctgtcagaagagtcctctgaaagtcgaaccagtggatgttttcttaaaa
ctcgctgagtttagttaa
DBGET
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