Cyprinodon variegatus (sheepshead minnow): 107081195
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Entry
107081195 CDS
T06110
Name
(RefSeq) polypyrimidine tract-binding protein 1-like
KO
K13218
polypyrimidine tract-binding protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107081195
03041 Spliceosome [BR:
cvg03041
]
107081195
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107081195
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107081195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107081195
NCBI-ProteinID:
XP_015224882
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
YLLRFDVQIFSKFGTVLRIIIFTKNNQFQALLQYSDGSSAQAAKLSLDGQNIYNGCCTLR
ISFSKLTSLNVKYNNEKSRDFTRPELPSGDSLEHPAMAAGFAPGIISASPYPGATHAFTP
TFTIQPAVSSHYPGLTVPALPGGLASLTLPTAARLGFPTFPAGHSVLLVSNLNPERVTPH
CLFILFGMFPSVVEDDLKMLFSSSGAVVNAFKFFQKDHKMALIQMGSVEEAIDCLIAFHN
HDLGENHHLRVSFSKSSI
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
tatctgcttcggtttgacgttcagatcttctcaaagttcggcactgtgctgaggatcatc
attttcaccaagaacaatcagttccaggccctgctgcagtattcagacggatcatctgcc
caggcagccaaactgtctcttgatggacaaaacatctacaacggttgctgtaccctgagg
attagtttctccaaactcactagccttaacgtcaaatacaataatgagaagagccgggac
ttcaccaggccagaactgccatctggagacagcttggagcatccggccatggctgcaggg
tttgctccaggaatcatctcggcttcaccgtaccccggagcaactcacgcttttactcca
acttttacaatccagccagcagtgtcctcccactatccaggcctgacagtccctgctctt
cctggagggctggcctctctgaccctccccactgctgccaggctgggattccccaccttc
cctgcaggacactcggtcctgttagtcagcaacctgaaccctgagagagttacgccccac
tgcctctttattctcttcggtatgttcccttctgtggttgaagatgacctaaagatgctg
ttctcaagttctggagctgttgtcaatgccttcaagttcttccagaaggaccataagatg
gctctgatccagatgggttcagtggaagaagccatcgactgtctcattgcattccacaac
cacgacctgggagagaaccaccacctgcgggtctctttctccaagtcctccatctga
DBGET
integrated database retrieval system
