Cyprinodon variegatus (sheepshead minnow): 107081325
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Entry
107081325 CDS
T06110
Name
(RefSeq) gastrula zinc finger protein xLCGF3.1-like
KO
K09191
general transcription factor IIIA
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107081325
03021 Transcription machinery [BR:
cvg03021
]
107081325
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107081325
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
107081325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-met
zf-C2H2_15
zf-C2H2_jaz
zf-C2H2_6
zf-Di19
GAGA
zf-C2HE
Zf-C2H2_ZNF451_2nd
zf-C2H2_16
Zf-C2H2_ZNF451_C
BolA
DUF2180
zf-H2C2_5
Zf-C2H2_ZNF451
zf-BED
TFIIIA_zf-C2H2
Zn_ribbon_SprT
zf-C2H2_11
DUF7066
Motif
Other DBs
NCBI-GeneID:
107081325
NCBI-ProteinID:
XP_015225009
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MYTHTGMKPFICGFCSKSFTHSGSLKSHMYIHTGEKPFICRVCGKTFPRQKNLKRHMYVH
TGEKPFVCGVCSKRFPRPENLKRHMRVHTGEKPFICVVCSQGFSQQHILKSHMHSHTGEK
PFICGVCCQGFLQKRNLQSHMRVHTGEKPFTCDVCHQGFSRQDALKSHLRVHTGEKPFVC
DICSQAFSRQDGLKSHMHGHTGEKPFTCGVCSKGFSQKGNLNSHMRVHTREKPFACVVCC
KAFSHSVSLKRHMGLHTRETICL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtatactcacacaggaatgaaaccatttatttgtggtttttgtagtaaaagttttacc
cattcaggtagtcttaagagtcacatgtatattcacacaggagaaaaaccttttatttgt
cgggtttgtggtaaaacatttccacgacaaaagaatctaaaaagacacatgtatgttcat
acaggagagaaaccgtttgtttgtggagtgtgcagtaaaagatttccacgaccagagaat
ctaaagaggcacatgcgtgttcatacaggagaaaaaccgtttatttgtgttgtttgtagt
caaggattttcacaacaacatattctaaaaagtcacatgcatagtcacacaggagagaaa
ccatttatctgtggtgtttgttgtcaaggatttttacaaaaaagaaacctgcagagtcac
atgcgtgttcatacgggagagaaaccatttacttgtgatgtttgtcatcaaggattttct
cgacaagatgctctaaaaagtcacttgcgtgttcacacaggagagaaaccattcgtttgt
gatatttgtagtcaagcattttcacgacaagatggtctgaaaagtcacatgcatggtcac
acaggagagaaaccgtttacttgtggagtttgtagtaaagggttttcccaaaagggaaat
ctaaatagtcacatgcgtgttcacaccagagaaaaaccttttgcttgtgttgtttgttgt
aaagcattttcacattcagttagtttaaagagacacatgggtttgcacacaagagaaact
atatgtttgtag
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integrated database retrieval system
