Cyprinodon variegatus (sheepshead minnow): 107081630
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Entry
107081630 CDS
T06110
Symbol
tulp4
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107081630 (tulp4)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Other domain-containing proteins
Tubby family proteins
107081630 (tulp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
107081630
NCBI-ProteinID:
XP_015225275
Ensembl:
ENSCVAG00000001646
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MFAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRKRYYEEGWLATGNSRGVVGVTFT
SSHCRRDRATPQRVNFNLRGHNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHILLHESDGIVSMSWNYPSFLVEDSSESDTDSDDYTPP
KVHSQKPLLTVSFTSGDISLMNSYDDLSPTLIRTGLKDVVAQWCSQGDLLAVAGMERTVL
LSADTPCSPPTKCAIVKFYNVQGDHIYSLDTPAQRPITTLCWGHRDSRLFLASGPALYVV
RVDHRVAALQLLCQQVIATAVKEEKDVGKLTMPSRLCTYVTSAFAPTIKPPIPDPNNMRD
FVSYPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMD
PKTDGKTDEIYSNSLISAMIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRDLVC
PFTNRINIDPRKSPKLSRATQEISRSPRLPIRKPSIGSPSLSRREFPLDDISQQNYLAQV
TSNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINLPVFS
PNVFSEDEDDLPVTGPAGGSDDNPPCTVNIPIAPIHSPAQAMSPAQSIGLVQSLLANQNV
QLDVLSNPTAPPAGASASGSDQSQDTILTAQYTVPTRYSSPGQVIFGGLEVGRLMVGPPP
SHHPSQQQQQQQQSQQQQLLHHQQVQQHQQQQQMLQQHHLQQQQHHLQQQQHHLQQQQHI
QQQLQQQLQQHIQMQQQQQLQQQHQQMQQQQQLQQQHQQMQLQQQQMHHHLQSQQQHHLQ
QQLHIQIPAPSMSSGQPSGTALHQLQIQIPHQPGDLVVDRTVGGEHEHLLKIKTTRPTPQ
LADGDTVVFSAPLELSKMNPPPPYPGTVAAAVAAAAAASPSASNAASSTSGTSETPPPAE
LCVKKGDMKLYPPGQQQAQYPTPLGYERITTFDSSGNVEEVCRPRTRLVCNQNVYTLQGP
GSSATLRVTSSSSSSAAEKKIQLPYTSATLNRLTAPRYSIPSGDPPPYPDVGNQNRNPNQ
RLDSSLIHATLRRNSREAALKVSQMLEPPRPLPPKAKNNALAASFQQRVPTALYTCSQCS
SGSGNGGTAPGSANGIAGGTIIRQDFPPGNGAPHSTVIVHSNSATTLASQSSYNLMSSLE
GPGSAAGGGGNRDRVEYVNSAFTEDETLSQSLRHLAIGGNDPSGLVVKRPPPYQWDPAGT
EEVWIPQERTAIAPPGPHKPPPLVLSPAQHLDVTRLPFVLSPKSPTSPSAASFQAAAAAT
GYQISLQYPPTTAYTGAQLQPIPGSPRPCASPKEVVAPVALSQQEATLVLSPGYSPSLAN
LACCPLPPMYPGGASCAGIPIPPIALHTPWGTYNSCPPMPSPAVPLPPKASHILAEKNVL
SPPPPPPPPPPPPPPPAELQSHGALQETMAEAGEGYQEVLSLTESPVPQRSEKFGKKNRK
RVDGRAEEANVSQLAEGNKSKKEGRALGDFNSLISSPRLGGRDKKKLKGQKEQQLKAKKL
SKATANSEFQDSSESEPELFISGDELLNQCQSGKKGWKSKRNMRAASELDEIKCRKANEK
EDRGLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRID
GNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgctgtggagcatggcccggtgctctgcagcgactccaacatcctgtgtttg
tcctggaagggccgagtccccaagagcgagaaggagaagcctgtgtgcagaaagcggtac
tatgaagagggctggctggctaccggcaacagtcgaggagttgtcggggtcacgttcaca
tccagccactgcagacgggatcgggccaccccacagcgggtaaacttcaacctcagagga
cacaatagtgaggtggtattggtgcggtggaatgagcctttccagaagttggccacatgt
gacacagacggaggaatttttgtttggattcagtatgaaggtcgctggtctgtggagctc
gttaatgaccgtggcgctcaggtgagtgacttcacctggtcgcatgatggaacgcaggct
ctcatctcgtatcgtgatggattcgtcctggtgggctctgtcagcggccagagacattgg
tcttctgagatcaacctcgaaagccagattacctgtgggatctggactcctgatgaccag
caggtgttgttcggtacggcagacggacaggtaatagtcatggactgccatgggcgaatg
ctggcccacatactgctgcatgagtctgacggcattgttagcatgtcgtggaattacccc
agcttcctggtggaggacagcagtgagagtgacacagactctgacgattacactccaccc
aaagtgcacagccagaaaccacttctgacagtcagcttcacctctggagacatcagcctg
atgaatagttacgatgacctctcacctaccctgatccgaaccggtctgaaagatgttgtg
gcccagtggtgctctcagggggaccttctggcggtggcagggatggagcgaacagtcctc
ctctctgctgacactccctgctctcctcccaccaaatgcgctattgtcaaattctacaat
gttcaaggagatcacatctactcactagacacaccagcacagcgccccatcaccacgctc
tgttggggtcacagggactcgcgtctgttcctggcatctggcccggcgctctatgttgtc
cgcgtggatcaccgggtcgcagcgctgcagctcctctgccagcaggtcatcgccacagca
gtaaaggaggaaaaagatgtcggcaagctcaccatgccatcccggctttgtacttacgtc
acttctgccttcgcccccaccatcaagccacccatcccggatcccaacaacatgcgggat
tttgtgagctacccgacatctgggaatgagagactgcactgcaccatgaaacgtacggag
gataacccagaggtgggagggccatgctatacgctgtacctggagtacttggggggtctg
gtacctattctgaagggacgacggataagcaagctgcgccctgagtttgtcattatggac
cctaaaacagatgggaaaacagatgagatttacagcaacagtctgatatcagccatgata
gacagctgtaactgttcagactccagtgacattgagcttaatgatgactgggtcggcaag
aaatctcccaagatatccagaggaagcaaatctcctaaacttcccagagacttagtttgt
ccctttaccaacaggataaatatagaccccagaaagtcccccaagctgtcccgggcaacg
caagagatctctaggtcgcctcgtttacctataaggaagccctcaattggttctccgagt
ttgtcacggagggaatttcctctagatgacatcagtcagcaaaattacctcgctcaggtc
acatccaatatttggggtaccaagtttaagatagttggattggcagcatttttacctacc
aatcttggtgcagttatttataagaccagcctcctccatctgcagcccagacagatgacc
atctacttgccagaggtgcgcaagatttccatggactatatcaacctgcctgttttcagc
cctaatgttttcagtgaggatgaagatgaccttcctgtcacaggccctgctggaggctct
gatgacaaccccccctgtactgtaaacatccctattgcccccatccatagccccgcccag
gccatgtcccctgcccaaagtattggcctggtccagtctctgttagctaatcagaatgtt
cagctggatgtccttagtaatccaacagcaccccctgctggagcttctgccagcgggtcg
gaccaaagccaggataccatcctgacagcccaatacacagtacctaccaggtattccagt
ccaggtcaggtcatttttggagggctggaagtgggtcggctaatggttggacctccacca
tctcatcatccatctcagcaacaacagcaacaacaacagagtcagcagcaacagcttcta
catcatcaacaggttcagcagcaccaacagcagcagcagatgctccagcagcatcaccta
cagcagcaacagcatcacctacagcagcaacagcatcacctacagcagcaacagcacatt
cagcagcagctccagcagcagcttcagcagcacatacagatgcagcagcaacagcaactg
cagcagcaacaccaacagatgcagcagcaacagcagctgcagcagcaacaccaacagatg
cagctgcaacagcagcagatgcatcatcatctgcagtcacaacaacaacaccatctacag
cagcagctccacattcagatccccgccccgtccatgtcatccgggcagccttcaggaaca
gccctgcaccagctgcagatccaaatcccccaccaacctggtgatttagtagttgacagg
acagtgggcggggagcatgaacatttgctgaaaatcaaaaccactcgaccgactccccag
ctggctgatggggatacagttgtattcagtgctcctttggagctcagcaaaatgaacccg
cctcctccttaccctgggacagtggctgcggctgttgccgctgcagctgctgcttctccg
tcggcttccaacgcagcttccagtacgtctggcaccagtgaaactcctccccccgctgag
ctctgtgtgaagaaaggagacatgaaactttatcctccaggtcagcagcaggcgcagtac
cccacacctttgggatatgaaaggataacaacatttgacagcagtggaaatgtggaagaa
gtatgtcgtcctcgaacacgccttgtctgcaatcagaatgtctacacactccagggacct
ggcagctctgccacgctcagggtcacttcctcttcatcctcatccgcagctgaaaagaaa
atccagcttccctacacctctgctacactgaatagactcactgcacctcgctattccata
cccagcggagatccgcctccctaccctgatgtgggcaatcagaacaggaatccaaatcag
aggctcgacagcagcctgatccatgcaaccctcaggaggaacagccgagaggctgcgctt
aaagtctcccagatgctggaaccaccaagaccactgcctcccaaggctaaaaataatgca
ctagcagcctccttccagcagagggtgccaacagccttatacacatgcagccagtgcagc
agtggatcaggtaacggtggtactgcaccagggagtgctaatgggatagcagggggaaca
attatcagacaggattttcctccagggaacggagctcctcacagcacagttatagttcac
tccaacagcgccaccactctcgcctcccagtcatcatataatctaatgagttcactcgag
ggacctggtagtgcagccgggggaggaggtaacagagacagggttgagtatgttaactca
gcatttacagaagatgagacactcagccagtcactcaggcacctggcaataggaggaaat
gatccttcagggcttgttgtcaaacgcccacctccctatcagtgggatccggctggcaca
gaggaggtgtggattcctcaagaaaggacagcaattgccccccctggaccacacaaacct
cccccccttgttcttagcccagctcaacacttggatgttaccagattgccttttgttctc
tctccaaagtctcctaccagccccagcgcagcgtcgttccaggctgctgcagcagcgaca
ggctaccagatctctctgcagtaccccccgaccacagcgtacaccggagctcagctccaa
cccatccctgggtcaccgcgcccctgcgcctccccaaaggaggtggtggcacctgtggca
ctttcacagcaggaggccacccttgtcttatctccgggctattctccaagcttagctaac
ttagcctgctgtcctctacctcccatgtatcctggaggagcttcttgtgctggaatcccc
atcccccccattgcccttcacacaccatggggcacctataattcttgtccgcctatgccc
agtcccgcagtgccactaccacccaaagcctcccacatattagcagaaaaaaatgttctc
tcaccacctcctcctccacctcctcctcctccacctcctccaccaccagcagaactgcag
agccatggggcattacaggagacgatggcagaagcaggggagggttatcaggaggtgctg
tctttgactgagagccctgtgccacagcggtcggagaagtttggcaaaaagaaccgcaag
cgggtggacggtcgggccgaagaggctaatgtgtctcagttagccgaaggcaataaatca
aagaaagagggcagggctttgggggattttaactctcttatctccagcccacggctggga
ggaagagacaagaagaaactgaagggacagaaggaacagcaactgaaggcaaagaagctg
agcaaggccactgccaacagtgagttccaggacagctcagagagcgagcctgagctgttc
atcagcggcgacgagctcctcaatcagtgccagagcggtaagaagggctggaagagtaaa
aggaatatgagggccgccagtgagctggacgagatcaaatgtcggaaagcgaatgagaag
gaggacagaggacttggcagccaggggtttgtgtatgtgatggccaacaagcagcctctg
tggaatgaagccacgcaggtctaccagctggactttggaggccgagtcactcaggagtca
gccaagaactttcaaattgagctggagggccggcaggtgatgcagtttggccggattgat
ggaaacgcctacatcctggacttccagtaccccttctctgcagttcaggcattcgcagtg
gctttggccaacgtcactcagcgcctcaaatga
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integrated database retrieval system
