Cyprinodon variegatus (sheepshead minnow): 107081657
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Entry
107081657 CDS
T06110
Name
(RefSeq) estrogen receptor-like
KO
K08550
estrogen receptor alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
107081657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107081657
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107081657
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
107081657
Nuclear receptors [BR:
cvg03310
]
3. Estrogen like
3A. Estrogen receptor
107081657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
DUF7234
Motif
Other DBs
NCBI-GeneID:
107081657
NCBI-ProteinID:
XP_015225326
Ensembl:
ENSCVAG00000001551
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MYKRQSQVQSKQEFGPALRPRISPASSELETLSPPRLPPSPRASLSDMYPEESRGSGGVA
AVDFLEGTYDYATPTPAPTPLYSHSSTGYYSAPLDAQGPPSDGSLHSLGSGPTSPLVFVP
TSPRLSPFMHAPNHHYLETASTPVYRSSHQPASREDQCDTRDDACSVGELRAGAGGFEMA
KETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQA
CRLRKCYEVGMMKGGVRKDRGRVLRRDKRRPGISDREKTVKGPENRAAPHHDKRRRSSAL
GGGRSSVSSLPSEQVLLLLQGAEPPMLCSRQKLSRPYTEATMMTLLTSMADKELVHMIAW
AKKLPGFLQLSLHDQVLLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNEGDCVEG
MTEIFDMLLATASRFRMLKLKPEEFVCLKAIILLNSGAFSFCTGTMEPLHDSAAVQNMLD
TITDALIHHISQSGYSVQQQARRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPLYDLL
LEMLDAHRHHPVKPPESSSPDDDRNPPSTSSSSGVCGSSSSSAGCSSGPRGSSENLIRIP
SAPGVLQYGGSRSDCTQVL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaggcagagccaggtgcagagcaagcaggagttcggaccagcactcagaccc
aggataagcccagcctcctcagagctggagaccctctccccgccacgtctcccaccctca
ccccgcgcctccctcagtgacatgtaccctgaagagagccggggctccggaggggtagct
gctgtggacttcctggaagggacgtacgactatgccacccccacccctgccccaacgcct
ctttacagccactcaagcactggctactactctgctcctctggacgcccagggaccaccg
tctgatggcagccttcattctctggggagtgggccgaccagtcctcttgtgtttgtgccc
accagcccgaggctcagcccttttatgcatgctccgaaccaccactatctggaaacagcc
tcaacaccagtttacagatccagtcaccagccagcctccagagaggaccagtgtgacacc
cgtgacgatgcatgcagtgtgggggagctcagagcaggagccggagggtttgagatggcc
aaggagacacgattctgcgctgtttgtagcgactatgcctccgggtaccactatggggtg
tggtcttgtgagggttgcaaggccttcttcaagagaagcattcagggtcacaatgactat
atgtgcccggcgaccaatcagtgtactattgacaggaataggaggaagagctgccaggct
tgccgtcttaggaagtgctacgaagttggcatgatgaaagggggtgttcgtaaagaccgc
ggtcgtgttcttaggcgtgacaaaagacggccgggcatcagtgacagagaaaagactgtt
aaaggcccggagaacagagctgcgccccatcatgataagaggagacgcagcagtgccctt
ggaggaggaagatcttcagtttccagcctgccatctgaacaggttctgctcctgcttcag
ggtgctgagcctccaatgctgtgctcccgtcaaaaactgagccgaccctatactgaggcc
accatgatgaccctgctcaccagcatggctgacaaggagctggtccacatgatcgcctgg
gcgaagaagcttccaggttttctgcaactctccctccacgatcaggtccttctgctggag
agctcatggctggaggtgctgatgatcggactgatctggaggtcaatccactgccctgga
aaactcatctttgcacaggacctaatactggacaggaatgagggagactgtgttgaggga
atgactgagatctttgacatgctgctggccaccgcttcccgcttccgaatgctcaaactg
aaacctgaggaatttgtttgccttaaagctattatactgctcaactctggtgccttttct
ttctgcaccggcacaatggagccccttcacgacagcgcggccgttcagaacatgctggac
accatcacagatgcgctcatacatcacatcagccaatcaggatattcggttcagcagcag
gcgagacgacaggctcagctgctgctgctgctttcccacatcaggcacatgagcaacaaa
ggcatggagcacctctacagtatgaaatgcaagaacaaagtgcctttgtatgatctgctg
ctggagatgcttgatgctcatcgccaccacccagtcaaaccgcctgagtcttcatctccg
gatgacgacagaaaccctccctccaccagcagctctagtggtgtttgtgggagcagctcc
tcatcagcaggttgtagttcaggacctcgaggtagcagcgagaacctgatcagaattccc
tcggctccaggggtcctgcagtacggagggtctcgctctgactgcacccaggtcctgtga
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