Cyprinodon variegatus (sheepshead minnow): 107081681
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Entry
107081681 CDS
T06110
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107081681 (gata6)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107081681 (gata6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
107081681
NCBI-ProteinID:
XP_015225358
Ensembl:
ENSCVAG00000020883
UniProt:
A0A3Q2DFI0
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MDLGENSWSMVKREVSSSPGSPAEQSYLPADSSRRDGTTPPSELDVLGHRRPDRSLHSYL
HFGHHGNATSAGEDIPLFTDLDQGSKLVLSAGAHKTSLLVDPADMYQTLAIAAAQSQTGY
DSSSGGYMHSSPNSPVYVPSSRVNPMISSLSYLQAGGSAQSAHGVSSHSVWSQSNPESPS
SYSAGSPHTTSRFHYPPSPPMNNGTPRDSSYTNTLNVGSRDQYGLSRPLSGTYPNPYSPY
VTPQLPSPWTGGPFDNTMLHTLQSRGAPLIRGPNGVSDILEDMAESRECVNCGSISTPLW
RRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRTSTSRRIGLSCANCQTSTTTLWRRNAEG
EPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKTKGSSGTNNSVSMTPTSTSSS
NSEDCSKTSSPSAQVSGVTSSVLPGSGEATGSGSVVKYPGQDSLYTSVGLTQPSDVASVR
GEPWCPMALA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggggaaaacagctggtccatggtcaagcgagaagtttccagcagcccaggc
tcgccggccgagcagagctacctgcccgctgacagcagcaggagggacgggaccacgcct
ccgagtgagctggacgtgctgggccaccgccgcccggacaggtcgcttcactcctacctt
catttcggacaccacggcaacgccacgagcgccggcgaggacatcccgctgtttacggac
ttggatcaggggagcaagctcgtcctctccgccggagcgcacaagaccagcctgctggtg
gaccccgcagacatgtaccaaactttggccatcgccgcagcccagagccagactggatat
gattcttcctccggtggttacatgcactccagccctaactccccggtctacgtccccagc
tccagggtaaacccgatgatctccagcctctcctatctgcaggctggcggctctgcgcaa
tccgcgcacggcgtctccagccactctgtttggtcgcagtccaacccggagagcccatcg
tcctacagcgccgggagccctcacaccaccagccggttccactacccccctagtccgcct
atgaacaacgggacccccagggacagtagctacacaaacacgctgaatgtgggcagcagg
gaccagtacggcctctcccggcccctcagtgggacctatccgaacccatactccccttat
gtgacaccgcagctaccctcaccttggaccgggggaccttttgataacaccatgctgcac
actttgcaaagcaggggagcgcccttgattagaggtccaaacggagtttcagatatcctg
gaggacatggcggagagtagggaatgcgtgaactgcggctccatctccacgccgctgtgg
aggcgcgacggcacgggccactttctctgcaacgcctgcggcctctacagcaaaatgaat
gggctgagccgaccattaattaaaccacagaaaaggacgtcaacctccagaagaatcggc
ctctcctgcgcaaactgtcagacaagcacaacgaccttgtggcgtaggaatgcagaagga
gaaccagtatgtaacgcatgtggcctctacactaagctacacggggtacctcggccgctc
gccatgaagaaagaggggatccagacacgaaaaagaaaacccaaaactttaaataaaacc
aaaggatcttcaggcaccaacaactctgtctccatgactcccacatccacctcctcatcc
aattctgaagactgctccaaaacaagctctccctctgcacaagtctcaggggtcacttcg
tccgtcctgcctggctcaggggaagcaaccggctcaggctcagtggtgaaatacccggga
caggacagcctgtacaccagtgtgggtttgacccagccgtcagatgtagcttcggtgagg
ggggaaccctggtgccctatggctttagcctaa
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