Cyprinodon variegatus (sheepshead minnow): 107081726
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Entry
107081726 CDS
T06110
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107081726 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107081726 (nhlrc1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107081726 (nhlrc1)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107081726 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
DUF5711
BpsA_C
PQQ_2
RING_XB3-XBAT31
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
107081726
NCBI-ProteinID:
XP_015225429
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDQSLRGCLSPEDTLKEIKTSLLECKVCFETFNLQQRERRPQNLSCGHVLCLECITSLSH
PLLRKLECPFCRQLCSVDSISHCQVLSDLQELLLSHSSSSFAPHSRATGGFISETALHLR
STFGGWGTLINPTGLAILGSMGEVVVVHDGEKRVVVFNQQGMKLHSFGERGAGNGDICYP
VDVAVSPAGYVIVTDAGGKAVKVFTSRGIHVLTVKDCFQLPWGVDMDSCGRILVSDLQAG
TLFRINVDFSHGVILENQSVKTNLQCPKALAHCRKTGNTAVMEHPRGKHGHKKLKVFTKD
FNVLYQMDSFSLTLQSSIRLNISDVAFSSDGDMVVSDSDQGLICSLGNLQNRPVITPLVG
DHLIRPSGLVLLNNSLIIVDGGDHTVKIYSSKPDG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagtcttcgtggctgcctgagtcccgaggacaccctgaaagagatcaagacc
agcttactggagtgtaaagtctgctttgagacgtttaacttgcagcagagggagcgcaga
ccgcagaacctttcctgtggtcatgtactttgtctggaatgcatcaccagtttgtcccac
cctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagtgttgacagtata
tcccattgccaggttctcagtgacctgcaggagctccttttgtcccacagttcctcctcc
tttgctccccacagcagggctacagggggttttatctcagaaactgctctgcatcttcgc
tccacatttggtggctgggggactctcatcaatccaactggattagccattctgggatct
atgggggaagtagttgtggtgcatgatggagagaagagagtggttgtgttcaaccaacaa
gggatgaagctgcacagctttggagaaagaggagcaggcaatggagacatctgttaccca
gtggatgtggcagtgagtccagctggttatgtcatagtgacggatgcagggggtaaagct
gtgaaggttttcacttcaagggggatacacgttttgacggtcaaagattgcttccagctt
ccttggggtgtggacatggacagctgtggacgtatcttggtgtcagacttgcaggctggg
accctgttcagaataaatgtggacttcagtcatggtgttatcctggagaatcaaagtgtt
aaaactaaccttcagtgtcccaaagctttggctcactgtcgaaaaaccggaaacacggct
gtgatggagcatccaagaggaaagcatggccacaaaaagttaaaagtgtttacaaaggac
ttcaatgttctttaccagatggacagcttcagcctgaccctgcagtcttccatccggttg
aacatatctgatgtggctttcagcagcgatggagacatggtggtgtccgactctgatcaa
ggcttgatttgtagtttaggaaaccttcagaaccgtccggtcattactcctcttgtgggg
gaccatctcatccgaccttctgggctggtgttacttaacaactcgctcattattgtagat
ggtggtgaccatacagtcaagatttattctagtaagcctgatggctga
DBGET
integrated database retrieval system
