Cyprinodon variegatus (sheepshead minnow): 107081764
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Entry
107081764 CDS
T06110
Symbol
rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107081764 (rims1)
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
107081764 (rims1)
Small GTPases and associated proteins
Rab associated proteins
107081764 (rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
DUF6990
Motif
Other DBs
NCBI-GeneID:
107081764
NCBI-ProteinID:
XP_015225481
LinkDB
All DBs
Position
Unknown
AA seq
1510 aa
AA seq
DB search
MFASVGPRGGPRAPAAPAIPEPDLSHLTEEERGIIMAVLARQREEEAKDEAILKEEKPIQ
ARTVNLVGQKKPQQQNDVRGIQQHLSSYRETVIRQASVAAGSAVHRDDAPTCGICHKTKF
ADGCGNLCSYCQTKFCARCGGRVSLRSNTEDKVLALCSSFGGQRQPTVGESSCSLVIWVC
NNCRKQQEILTKPGEWFTGPPGKASSLGSAVSEPSVCQVSGDKLRSHSQAPTGSTGTIQD
QAGVLGTTPGTDARSLSEPPRDRRNGRGGGGTGRGERRTGQPRLQTQVSMDRDLRGESRE
RREGRLLKGRSLEHDPLGGGVGVRRTEDGGYQQVGNNAGPLRQAEPFSSGGRGLPGQGRG
TGSGTREFGDATRLGQRTVGGAQDVSQKAPPELRVPSALGPETGLGQGAGVKRTKRDKAE
SMLRNDSLSSDQSESLRPPPPRPHKSKRGLGAGGKRQTSVSSSEEDGGTTPEYSSCEDAE
IESISERGDWECNPHDPTGWHHPVTWQPSKEGDHLIGRITLSKRTATMPKEAGALLGLKV
VGGRVTESGRLGAFITKVKKGSLADVVGHLRAGDEVLQWNGKLLPGATMKEVYNIILESQ
AEPQVQLIVSRPIGVYRKYHDIPRIPDTSHPPLESTGSSSFESQKIERPSLNVLSPSSPG
MLRDAPQLMPGQLSVKLWYDKVGHQLIVNVLQATELPLRPDGRPRSPYVKMYFLPDRSDK
SKRRTKTMKKTCEPKWNQTFVYTHVHRRDFRNHMLELTVWDQPRSPEEDSTFMGEILIEL
ETALLDDKPHWYPLQTHDVSSIPLPRPSPFLPRRNTDAPGKKLQRSQRITDPEFDEHTAL
VSKADGRGRERQREPTSTLEVPDQQRTPSHHIRSRSVSPHREEQGRTIRSRASNVPTQRS
LDDELPHSRRSRSPNRYCENSRGRRQGEEYLDDSEVILIHQSMRGKSAECLHTSDLQPTL
DRVKSASANCLTPDNHVPPPETERKTFSQSLPRRRPASPRILIQHASPEDDRIWMLLPSE
ETLIHLSTKKRQPRTLEIPECQTFGRKRSDRGRGHLHSGASLSSAAAASAARRARQLPQL
PPQSSSVEQALVAEERVRQLQMRVHSNRISAATTSSQQDLDRALRNKRELYKDQRRSSEN
VSHKSSDSDVSDVSAISRTSSASRISSTSYMSIQSERPRGRFSRAVRASGRHILKSTSVS
GEIYGMEHADGSQSDTALGSLGSGIKKRRSSLSQRVVAILPSRRSRSTSQISQTEAAGKA
ADRQKEAPAGKKVSKAGSSTIQRSVETGMAVEYPRGGSAMNRQASRESTDGSMNSYSSEG
NLIFSGMRLGADSQFSDFLDGLGPGQLVGRQTLATPAMGDVQIGLMDKKGQLEVEVIRAR
GLTSKPGSKSLPAPYVKVYLLENGTCKAKKKTKIARKTLEPLYQQHLLFEESPQGKVLQV
IVWGDYGRLDHKCFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLAPLTRLASQTSL
DSGPPPGVRS
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctcggtgggccctaggggcggcccgcgcgcaccggccgctccagctatcccg
gagccggacctcagccatctgaccgaggaggagaggggcatcatcatggctgtgctggct
cggcagcgggaggaggaagccaaggatgaggccatattaaaagaggagaagccgattcaa
gcgaggacagtgaacctggtcggacagaagaagcctcaacagcaaaatgacgtcagaggt
atccagcagcacttgtccagctaccgggagacagtgatccggcaggcctcggtggcagca
ggctcagctgttcatcgggacgatgcaccaacctgtggcatctgccacaagaccaagttt
gcagatggatgtgggaacctgtgttcttactgccagaccaagttctgcgctcgctgtggg
ggaagagtgtccctgcgctccaacacggaggacaaagtgttggctctctgttcttcattt
ggtggccaaaggcagcccacagtgggagaatcaagctgctccctggtgatatgggtgtgc
aataactgcagaaagcagcaggagatcctcaccaagccaggagagtggttcactggtcct
cccgggaaggcctctagtctcggttctgctgtcagtgagccgtctgtgtgccaagtgtcc
ggagataagctgagatctcactcccaagcacccacaggctccactgggactatccaagac
caagcaggtgtactggggaccacccctggtacagatgctcggtcgctaagtgagccacca
cgggacaggagaaatggtcgtggaggcggtggaacaggtcggggggagcggcggacaggc
cagcctaggctgcaaacccaggtctccatggatcgagacctacgaggagagtcgagggag
cgaagggaaggccggctgttgaagggacggtctctggagcatgatcctttggggggtggt
gttggtgtaagaaggacagaggatggcggttatcagcaggtgggcaacaatgcaggtccc
cttcgacaagcagagccattttcatcaggaggcagggggctgcctgggcagggtcgtggc
acaggcagtgggacacgagagtttggggacgctactcgacttggacagaggacggtgggc
ggggcacaggatgtttcacagaaagcacctcctgaactcagagtaccttcagctttggga
cctgaaacgggtcttggccagggtgctggggtgaaacggaccaaacgggacaaggctgaa
agcatgctgcgaaacgattcgctaagctctgaccagtctgaatcattgcggcctcctcca
ccacggccccacaaatcaaaacgggggctgggggctggagggaagagacaaaccagtgtc
agcagttcagaggaagacggtggaactacgcctgagtacagtagctgtgaagatgctgaa
attgagagcataagtgaaaggggagactgggagtgcaatccacatgaccccacaggatgg
catcatcctgtaacctggcagccatccaaggagggagaccatctgattggacgaatcacc
ctcagcaagagaactgctaccatgcctaaagaggctggggctttgctcgggttaaaggtg
gtcggagggagagtaaccgagtcagggagattaggtgccttcatcaccaaagtcaagaag
ggtagcctggctgacgtggtgggacatctccgagcaggggatgaggttttacagtggaac
gggaagctgttgccaggggcaaccatgaaggaagtatataacatcatcctggagtctcaa
gccgaacctcaggtgcagctgattgtgtccaggcctattggggtttatagaaaatatcat
gatatcccaagaatccccgacacgtcccaccctccattagaatctacaggttccagttct
tttgagtcccagaagatcgagagaccatctttaaatgtcctgtctccctccagtcctggg
atgctccgagatgctcctcagctgatgccagggcagctatcggtgaagctgtggtacgac
aaagtgggtcaccaactaatagtcaacgtgctgcaggctacagagcttcctcttcggcct
gatggacgccccaggagtccatatgtaaagatgtacttcctccctgaccgcagtgacaaa
agcaaacgaaggacaaaaaccatgaagaagacatgcgagcctaagtggaaccagaccttc
gtctacactcacgtccatcgcagggatttccgcaaccacatgctggagctgactgtgtgg
gaccaacccaggtcacctgaggaggacagcacctttatgggagagatcctgattgagctg
gagacggccttactagacgacaagcctcactggtatccccttcaaacccatgatgtctca
tcgatcccactgccccgaccctcccccttcctgcccagacgaaacacagacgctcctggc
aagaagctgcagcgttctcagcgtataacagatcctgaatttgatgagcatacagcacta
gtctctaaagcagatgggcgtggcagagagaggcaacgggaaccgacgtctaccttggag
gtgcctgatcaacagcggacgccttcccatcacatccgctcccgctccgtgtcccctcac
cgtgaggagcaggggcgcaccatccggtcccgagcatccaatgtccccacccagaggagt
ttggatgacgagcttcctcactctcggcgttcccgttctccaaaccgctattgcgagaac
tccagagggcggcgtcagggggaggaatacttggacgacagtgaggtcatcttgatccac
cagtcaatgcgcggcaaaagtgccgagtgcctgcacacgagtgatctccagccaaccctg
gacagggttaagagtgctagcgccaactgtctcactccagacaatcatgtccccccacca
gagactgaaagaaaaactttctcccaatccctgcctcggagacgtccggcaagtcccagg
attcttatccaacatgcttcccctgaagatgacagaatatggatgctacttccatctgaa
gagactttaatccacctcagtacaaagaagaggcagcctcggaccctggaaatcccagaa
tgtcagacttttggcaggaagcggtctgacagaggcaggggtcatctgcacagtggtgca
tctctgtcgtcagcggcggcagcatcggcagcacgcagagcaaggcagcttccacagctt
ccaccccagagcagctccgtagaacaagccctggtagcagaggagcgtgttcgtcagctc
cagatgagggttcattctaaccggatttcagctgccaccacctccagccaacaggaccta
gacagagccctcagaaacaaaagagagctctataaggaccagcggaggagcagtgaaaat
gtatcccataagtcctcagacagtgatgtcagtgatgtgtcagccatctctcgaaccagc
agtgcctctcgcattagtagcaccagctacatgtccatccagtcagagagaccccggggt
cgcttcagccgagctgtacgtgcatcgggtcgccacattctgaagagcaccagtgtcagc
ggtgagatctacggcatggagcacgctgatggcagccagtcggacacggccctcgggagt
ctggggagcggaatcaagaagcggcgctcaagtctgagccaacgggttgttgccatcctg
ccgtcgagacggagccggagtacttcacagattagccagacagaggcagcgggtaaggcg
gcggacagacagaaagaggcgccggcgggtaagaaggttagtaaggcgggcagcagcaca
atccaaaggagtgtggagaccgggatggcagtggagtatccacgaggaggatcagccatg
aaccgccaagccagcagggagtccactgatggcagcatgaacagctacagctctgagggg
aatttgatcttctcagggatgcgcttgggtgctgacagccagtttagcgacttcctggac
ggattaggcccaggtcagctggttggccggcaaacactagcaacacctgcaatgggtgat
gttcagattgggttgatggataagaaaggccagctggaggtagaggtgatccgagcgcga
ggccttacctctaaaccaggctccaaatccctcccagctccttatgtcaaggtctatctg
ctggagaacggcacatgtaaagccaaaaagaaaaccaagattgcacgaaagaccctggag
ccgctctaccagcagcacttgctctttgaagaaagtcctcagggcaaggtgcttcaggtt
atagtgtggggcgactacggacgactggaccacaaatgtttcatgggtgtagcacagatc
ctgctggaggagctggacctctcaagcacggtgattggctggtacaaactgtttccaccg
tcctcattggtggaccccacgctagctccgctcacgcgcctggcgtctcagacgtcgctg
gactcaggaccaccacccggcgttcggtcctag
DBGET
integrated database retrieval system
