Cyprinodon variegatus (sheepshead minnow): 107081828
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Entry
107081828 CDS
T06110
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107081828
Pattern recognition receptors [BR:
cvg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
107081828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_6
LRR_NXF1-5
LRR_EndoS
DUF3725
Adap_comp_sub
Motif
Other DBs
NCBI-GeneID:
107081828
NCBI-ProteinID:
XP_015225628
Ensembl:
ENSCVAG00000010643
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MGSNDKTRPKGQLRFCKLNMFFLLMFMIYFPVPVSGFSLQSCTVSINTAVCVKKRLTAIP
KDVPPTVTGFDLSVNRLTRIQQSDFPPLPLLLFMDLNRNKISEIDPGAFRTLTSLRRLNL
NNNKVIKLGERVFDGLNNLTVLRINYNQIKVLSSTSFQSLTKLEVLDISHNKLQKSADLE
LILHHMPQLQELVLRGNSLKAFNSWEITNRSLALHILDLTLNPLKDFKVTSDIFQNLTRL
KLGNPKGNEQTIWDVKNHTFLSRVSNLDISGLIMTLDDMKSLLEAVTSSLTSLRMNSMKL
NHSQLINMSCSLPTMFILQFQFNKLKNKIDSYFFKSCVHLTELDLANNYIEHIPENAFMT
LKDLKVLILSNNKLSSVPNATRTLQNLIELDLSSNNIGSVTCMDFSNNVKLKELALKNNS
IQTLSDCVFKNLLQLQVLRLQSNQLIQLNKAFEKNLPNLKRLYLNGNKLKKISAKEFAGL
RSLQNLTLHQNQIKDLVEDSFVGLTNLTDINLQTNCLTMKALKTGAFNALINLRSLDLTS
NHIKFEPLSHPPFSNLSRLERLFFMGQHLNGNQHLSINSLQGLNNLLYFNARKNHLTNLD
NDTFTYTPKLEYLDIGSNDLKTLSSQLFAPIKNLKNLYIHRTALHSLDFFIEANLTKLEF
LEGRHNQYSVITEKVIKSLPSLLFVDFTYISFSCDCDNVWFINWTRANKQTQVNDAYNYS
CNYPDNFKGKKLLDFDITSCLPDKGFIHFASTTGVILFFLVISFTYHFMRSHLYYAYHLI
WAWLFDSRYKNKQASHRYDAFISYNSNDEPWVIEQLLPRLEGEQGWRLCLHHRDFEPGRS
IIDNITDAIYSSRKTICVISQRYLRSEWCSREVQTASFRLFDEQEDVLILIFLEDIPTYM
LSPYHRMRKLLKKQTYLNWSRAADQPDVFWENLRKALQTGNKPDGEKLLLTVIETQ
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggatccaatgacaaaacaagaccaaaaggacaattgagattttgcaagctcaacatg
ttctttctcttgatgttcatgatctatttccctgttcctgtgagtggattttccctgcaa
agttgcacagtgagcatcaatacagccgtatgtgtaaagaagagactgactgcaatacct
aaggatgttcctccaacagtaactggctttgacctatctgtaaacaggctgacgagaata
caacagtcagattttccaccattacctcttctgctttttatggatctgaatcgtaacaaa
atttcggaaatagaccccggtgcttttcgtacgctgacttccctccgacggttaaatctc
aacaacaacaaagttattaaactgggggaaagagtttttgatggattgaacaacctcact
gtgttaagaattaattataaccagattaaagtgctatcatccacatcttttcagtcgctg
acaaaattagaagttttggatatttctcacaacaaactgcagaagagtgcagatctggag
ctaatattgcatcatatgccacagctgcaagagttggtgctaagaggaaatagtttaaaa
gcttttaattcctgggaaattactaaccgctcacttgctcttcacattcttgacttgact
cttaatccgctgaaggactttaaggttacttctgatatcttccaaaacctcacccgcctg
aagcttggcaatcctaaaggcaacgaacaaacaatatgggatgtgaaaaaccacactttc
ctgagcagagtgtccaatcttgatatcagtgggctcattatgactcttgatgatatgaaa
tcattacttgaagcagtaactagctcactaacttctctacggatgaacagcatgaaatta
aatcatagccaactcatcaacatgtcttgctccctcccgacaatgttcatattgcagttt
caattcaataagcttaagaataaaattgattcttatttctttaaatcctgcgttcatctg
actgagttagatttagcaaataattatatagaacatatcccagaaaatgcctttatgact
ctgaaagatttaaaggttttgattctaagcaacaacaagctttcatcagttccaaatgca
acaagaactctacaaaatcttatagagctcgatctcagcagcaacaacatcggttcggtc
acttgtatggatttctccaataatgtgaagctaaaggagctagctctgaagaataactca
atccaaactctgagtgactgcgttttcaagaatttgctacaactccaagttctccgatta
caatccaatcagttaatacaactaaataaagcttttgaaaaaaatctccccaaccttaaa
cgtctatatttgaatggaaacaaactcaaaaaaatttcagcaaaggaatttgcaggcttg
cgttctctccagaatctaacattacatcaaaatcaaataaaggaccttgttgaagacagc
tttgttggactcacaaatctcactgatattaacttgcagacaaattgcctcaccatgaag
gccttaaagacaggtgccttcaatgctcttattaatcttagaagtttagatctaacttct
aatcatattaaatttgagccactgtcgcatcctccattttctaatctgtcccgtttagag
aggttgttctttatgggccaacatcttaatgggaatcaacatcttagcatcaactctctc
caaggtttaaacaacctgttatattttaatgccagaaaaaatcatcttactaaccttgat
aacgacacgtttacatacactccgaagttagagtatcttgacattggctcaaatgacttg
aagaccctttcttcacagctgtttgccccaattaaaaaccttaaaaacctctatatacac
cgaacagctctgcattcattagatttctttatagaggccaacctgactaagctggagttc
cttgagggaagacacaaccagtactcagtaatcactgagaaagtaatcaagtcccttcca
tctcttttgtttgtagactttacatatattagtttctcttgtgactgtgataatgtctgg
tttataaattggaccagagctaacaaacaaacacaggtcaacgatgcatataactattct
tgcaactatccagataacttcaaaggcaaaaaacttttggactttgacatcacatcctgc
ttgccggacaagggttttatccattttgcgtccacaacgggcgtcattcttttttttttg
gtcatctccttcacttaccattttatgaggtctcacctttactatgcctaccacctcatc
tgggcttggctttttgactcaaggtataagaataagcaagcttctcatcggtacgatgcc
tttatatcctacaactccaatgatgagccttgggtgattgaacagctgttaccccggctg
gagggagagcagggctggaggttatgtctgcaccatcgagactttgaaccagggaggtcc
attatagacaacatcacagatgctatctatagcagtaggaagaccatctgtgtgatcagc
cagagatacctcaggagtgagtggtgctccagagaggtccagacagccagcttccgtctc
tttgatgagcaggaggacgtgctcatcctgatcttcttggaggacattcccacctacatg
ctgtctccttaccaccgcatgaggaagctcctgaagaagcagacctacctgaactggtcg
cgagccgcggaccagcctgacgtgttctgggagaatctgaggaaggctctgcagaccgga
aacaaaccagatggggagaagttattgctcacagtgatcgaaacacagtga
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